FFCP PHASE1:Mm9::chr10:115614449..115614473,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19279|HGNC=|MCL_coexpression_id=12|UniProt=Q62132|association_with_transcript=0bp_to_ENSMUST00000128399_5end|description=CAGE_peak_2_at_Ptprr_5end|id=chr10:115614449..115614473,+|ontology_enrichment_celltype=CL:0000239!2.64e-07!6;CL:0000677!2.64e-07!6;CL:0000212!2.64e-07!6;CL:0000584!2.64e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.26e-14,6;CL:0000677,1.26e-14,6;CL:0000584,1.26e-14,6;CL:0000075,1.99e-12,7;CL:0002563,1.70e-09,9;CL:0002251,1.70e-09,9;CL:0000682,1.25e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.30e-12!43;UBERON:0005409!6.10e-12!59;UBERON:0000344!2.10e-11!15;UBERON:0004923!2.25e-09!24;UBERON:0001242!2.27e-09!13;UBERON:0000060!2.27e-09!13;UBERON:0001262!2.27e-09!13;UBERON:0004786!2.27e-09!13;UBERON:0000474!3.49e-08!9;UBERON:0003134!2.57e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.84e-24,31;UBERON:0000344,1.77e-22,15;UBERON:0005409,8.15e-22,47;UBERON:0001242,6.43e-18,13;UBERON:0001262,6.43e-18,13;UBERON:0004786,6.43e-18,13;UBERON:0004923,5.46e-13,24;UBERON:0000474,6.32e-11,9;UBERON:0002108,2.73e-10,4;UBERON:0003350,1.70e-09,9;UBERON:0004808,1.70e-09,9;UBERON:0001277,1.70e-09,9;UBERON:0003134,4.11e-09,8;UBERON:0001007,4.37e-09,116;UBERON:0001555,4.37e-09,116;UBERON:0007026,4.37e-09,116;UBERON:0004119,7.93e-09,118;UBERON:0000925,7.93e-09,118;UBERON:0006595,7.93e-09,118;UBERON:0003100,9.05e-09,11;UBERON:0007023,1.91e-08,51;UBERON:0000331,2.20e-08,3;UBERON:0002116,2.20e-08,3;UBERON:0001204,2.20e-08,3;UBERON:0001168,2.20e-08,3;UBERON:0000485,1.26e-07,11;UBERON:0004921,2.09e-07,114;UBERON:0000992,8.26e-07,3|phase1_expression=0,43.9709013625595,71.8898798235467,9.37639055051173,11.0197060588196,14.1018588405987,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,42.5579844630462,61.0228687638672,36.1766137392463,46.5222955851801,37.7074657200306,44.0854333138787,14.8697776558359,22.1730510655305,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0.505524445014783,3.9964357901671,0.258937883647172,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,5.59175283654366,0,0,26.8229907969021,0,0,0,0,0,0.376963056338593,0,0,0.62336413367868,0.648965052271031,0.407357455401265,0,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,72.3617134734518,11.1069237998689,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,11.3886974770683,0.823494773620054,0.502670417600539,0.795825888164603,2.14460495831032,5.39291645192533,10.59076444386,19.3167035056736,0,0,0,0.203651327845314,0.193952487167626,0.701358198903186,0.569128834118316,0.295220295959204,0.156998727841375,0.370191491765402,0,0,0,0,0,0.482354319504834,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.70328102249922,1.95872164033981,2.93196526836437,9.56826713240706,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0.329098041204242,0.304464949114599,0.469343416127421,0.42366414172764,0,0.49465875882444,0,0,0,0,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0.655087691238533,1.61837215661785,1.90102948168273,3.14107130380836,13.9984171155136,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,23.5691304719272,3.19060208267009,12.6374620744413,1.2862102744744,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p2@Ptprr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19279 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q62132 | |||
|association_with_transcript=0bp_to_ENSMUST00000128399_5end | |||
|cluster_id=chr10:115614449..115614473,+ | |||
|description=CAGE_peak_2_at_Ptprr_5end | |||
|id=chr10:115614449..115614473,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.64e-07!6;CL:0000677!2.64e-07!6;CL:0000212!2.64e-07!6;CL:0000584!2.64e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.26e-14,6;CL:0000677,1.26e-14,6;CL:0000584,1.26e-14,6;CL:0000075,1.99e-12,7;CL:0002563,1.70e-09,9;CL:0002251,1.70e-09,9;CL:0000682,1.25e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.30e-12!43;UBERON:0005409!6.10e-12!59;UBERON:0000344!2.10e-11!15;UBERON:0004923!2.25e-09!24;UBERON:0001242!2.27e-09!13;UBERON:0000060!2.27e-09!13;UBERON:0001262!2.27e-09!13;UBERON:0004786!2.27e-09!13;UBERON:0000474!3.49e-08!9;UBERON:0003134!2.57e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.84e-24,31;UBERON:0000344,1.77e-22,15;UBERON:0005409,8.15e-22,47;UBERON:0001242,6.43e-18,13;UBERON:0001262,6.43e-18,13;UBERON:0004786,6.43e-18,13;UBERON:0004923,5.46e-13,24;UBERON:0000474,6.32e-11,9;UBERON:0002108,2.73e-10,4;UBERON:0003350,1.70e-09,9;UBERON:0004808,1.70e-09,9;UBERON:0001277,1.70e-09,9;UBERON:0003134,4.11e-09,8;UBERON:0001007,4.37e-09,116;UBERON:0001555,4.37e-09,116;UBERON:0007026,4.37e-09,116;UBERON:0004119,7.93e-09,118;UBERON:0000925,7.93e-09,118;UBERON:0006595,7.93e-09,118;UBERON:0003100,9.05e-09,11;UBERON:0007023,1.91e-08,51;UBERON:0000331,2.20e-08,3;UBERON:0002116,2.20e-08,3;UBERON:0001204,2.20e-08,3;UBERON:0001168,2.20e-08,3;UBERON:0000485,1.26e-07,11;UBERON:0004921,2.09e-07,114;UBERON:0000992,8.26e-07,3 | |||
|phase1_expression=0,43.9709013625595,71.8898798235467,9.37639055051173,11.0197060588196,14.1018588405987,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,42.5579844630462,61.0228687638672,36.1766137392463,46.5222955851801,37.7074657200306,44.0854333138787,14.8697776558359,22.1730510655305,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,1.76469446409304,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0.505524445014783,3.9964357901671,0.258937883647172,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,5.59175283654366,0,0,26.8229907969021,0,0,0,0,0,0.376963056338593,0,0,0.62336413367868,0.648965052271031,0.407357455401265,0,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,72.3617134734518,11.1069237998689,0,0,0,0.201683524623343,0.667134131534611,0.380451252225118,11.3886974770683,0.823494773620054,0.502670417600539,0.795825888164603,2.14460495831032,5.39291645192533,10.59076444386,19.3167035056736,0,0,0,0.203651327845314,0.193952487167626,0.701358198903186,0.569128834118316,0.295220295959204,0.156998727841375,0.370191491765402,0,0,0,0,0,0.482354319504834,0.50925170356284,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,1.70328102249922,1.95872164033981,2.93196526836437,9.56826713240706,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0.329098041204242,0.304464949114599,0.469343416127421,0.42366414172764,0,0.49465875882444,0,0,0,0,5.82961673259701,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0.108005340821801,0,0.655087691238533,1.61837215661785,1.90102948168273,3.14107130380836,13.9984171155136,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0,0,23.5691304719272,3.19060208267009,12.6374620744413,1.2862102744744,0.501572104035363,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p2@Ptprr | |||
}} |
Revision as of 21:47, 3 August 2015
Short description: | p2@Ptprr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptprr_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000128399_5end |
EntrezGene: | 19279 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.26e-14 | 6 |
gut absorptive cell | 1.26e-14 | 6 |
enterocyte | 1.26e-14 | 6 |
columnar/cuboidal epithelial cell | 1.99e-12 | 7 |
intestinal epithelial cell | 1.70e-09 | 9 |
epithelial cell of alimentary canal | 1.70e-09 | 9 |
M cell of gut | 1.25e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.84e-24 | 31 |
mucosa | 1.77e-22 | 15 |
gastrointestinal system | 8.15e-22 | 47 |
intestinal mucosa | 6.43e-18 | 13 |
wall of intestine | 6.43e-18 | 13 |
gastrointestinal system mucosa | 6.43e-18 | 13 |
organ component layer | 5.46e-13 | 24 |
female reproductive system | 6.32e-11 | 9 |
small intestine | 2.73e-10 | 4 |
epithelium of mucosa | 1.70e-09 | 9 |
gastrointestinal system epithelium | 1.70e-09 | 9 |
intestinal epithelium | 1.70e-09 | 9 |
female reproductive organ | 4.11e-09 | 8 |
digestive system | 4.37e-09 | 116 |
digestive tract | 4.37e-09 | 116 |
primitive gut | 4.37e-09 | 116 |
endoderm-derived structure | 7.93e-09 | 118 |
endoderm | 7.93e-09 | 118 |
presumptive endoderm | 7.93e-09 | 118 |
female organism | 9.05e-09 | 11 |
adult organism | 1.91e-08 | 51 |
ileal mucosa | 2.20e-08 | 3 |
ileum | 2.20e-08 | 3 |
mucosa of small intestine | 2.20e-08 | 3 |
wall of small intestine | 2.20e-08 | 3 |
simple columnar epithelium | 1.26e-07 | 11 |
subdivision of digestive tract | 2.09e-07 | 114 |
female gonad | 8.26e-07 | 3 |