FFCP PHASE1:Mm9::chr3:87161885..87161903,+: Difference between revisions
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{{FFCP|EntrezGene=11801|HGNC=|MCL_coexpression_id=3422|UniProt=Q9QWK4|association_with_transcript=82bp_to_ENSMUST00000015998,NM_009690,uc008psa.2_5end|description=CAGE_peak_3_at_Cd5l_5end|id=chr3:87161885..87161903,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,2.08e-11,6;CL:0000556,2.08e-11,6;CL:0000839,9.07e-09,13;CL:0002092,6.93e-08,3;CL:0002540,6.93e-08,3;CL:0000050,2.28e-07,9;CL:0000763,7.24e-07,16;CL:0002027,8.18e-07,3;CL:0002006,8.18e-07,3;CL:0002024,8.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.07e-16!22;UBERON:0007499!1.07e-16!22;UBERON:0006925!1.07e-16!22;UBERON:0009497!1.07e-16!22;UBERON:0000015!1.07e-16!22;UBERON:0002423!1.07e-16!22;UBERON:0006235!1.07e-16!22;UBERON:0008835!1.07e-16!22;UBERON:0003894!1.07e-16!22;UBERON:0004161!1.07e-16!22;UBERON:0008836!1.07e-16!22;UBERON:0002405!8.47e-16!70;UBERON:0009854!1.30e-15!23;UBERON:0009856!1.30e-15!23;UBERON:0005172!3.80e-14!49;UBERON:0005173!3.80e-14!49;UBERON:0002417!3.80e-14!49;UBERON:0000916!3.80e-14!49;UBERON:0002365!1.02e-13!25;UBERON:0002330!1.02e-13!25;UBERON:0005256!5.90e-09!47;UBERON:0005057!7.67e-09!51;UBERON:0009569!7.71e-09!66;UBERON:0002371!1.27e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.81e-29,22;UBERON:0007499,9.81e-29,22;UBERON:0006925,9.81e-29,22;UBERON:0009497,9.81e-29,22;UBERON:0000015,9.81e-29,22;UBERON:0002423,9.81e-29,22;UBERON:0006235,9.81e-29,22;UBERON:0008835,9.81e-29,22;UBERON:0003894,9.81e-29,22;UBERON:0004161,9.81e-29,22;UBERON:0008836,9.81e-29,22;UBERON:0009854,2.83e-27,23;UBERON:0009856,2.83e-27,23;UBERON:0002365,1.05e-24,25;UBERON:0002330,1.05e-24,25;UBERON:0005172,2.45e-16,49;UBERON:0005173,2.45e-16,49;UBERON:0002417,2.45e-16,49;UBERON:0000916,2.45e-16,49;UBERON:0002371,6.02e-14,16;UBERON:0005256,1.25e-11,45;UBERON:0003914,6.08e-11,47;UBERON:0009569,1.11e-10,66;UBERON:0001474,1.80e-09,22;UBERON:0004765,1.80e-09,22;UBERON:0001434,1.80e-09,22;UBERON:0001041,8.97e-09,80;UBERON:0003929,1.06e-08,55;UBERON:0005177,4.91e-08,79;UBERON:0002368,1.29e-07,60;UBERON:0002193,1.68e-07,48;UBERON:0002405,1.68e-07,48;UBERON:0003104,2.03e-07,61;UBERON:0009142,2.03e-07,61;UBERON:0002390,4.31e-07,45;UBERON:0003061,4.31e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32908547449759,4.45445588257617,4.19737126876888,1.57731082679119,1.37114433605739,3.39511721438424,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,15.2982951937838,22.7439263390404,18.4724829885986,20.0732074047331,3.07374644257244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.869593466105033,22.371020801516,0,0,3.24888208723835,2.68816132258401,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,5.17875767294343,0.890652834388949,0,0.913396434936424,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.722996784599558,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,15.4155366085317,0.333690211432188,2.75182593158484,3.82265591054251,9.12870546248263,9.88826354984909,10.6942857748196,7.76779571117189,7.62035565842666,8.51140380883053,25.8782771749238,36.4698128715133,9.67316786655138,10.1031551178845,8.96987067609561,13.0259750768109,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.534196811001766,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.291480836629851,0,7.86006051670122,0,0.370389054739423,1.88368457004691,2.32380187125743,13.7266903923914,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0.655087691238533,0.269728692769641,2.23164330458407,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,1.21553358534147,2.72497111416377,1.10306105070008,0.888986911206461,0.206035057238894,0.320919209591815,0,0.25347929989024,0.754505365544305,0.842773567228942,0.384150914429216,0.574354689556133,0.476293691283074,0.579421629724277,0.578727661391115,0,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,1.45346416632329,0.752875043322645,0.761531471025089,1.09756783723664,0,0.814824683075171,1.12228454331548,1.42362021749009,0.788035859004508,0,0.309873682371932,1.15743966588685,0,0.701794825336225,1.07435527024149,0.191288332068843,0.441182838239031,0|short_description=p3@Cd5l}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11801 | |||
|HGNC= | |||
|MCL_coexpression_id=3422 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QWK4 | |||
|association_with_transcript=82bp_to_ENSMUST00000015998,NM_009690,uc008psa.2_5end | |||
|cluster_id=chr3:87161885..87161903,+ | |||
|description=CAGE_peak_3_at_Cd5l_5end | |||
|id=chr3:87161885..87161903,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.08e-11,6;CL:0000556,2.08e-11,6;CL:0000839,9.07e-09,13;CL:0002092,6.93e-08,3;CL:0002540,6.93e-08,3;CL:0000050,2.28e-07,9;CL:0000763,7.24e-07,16;CL:0002027,8.18e-07,3;CL:0002006,8.18e-07,3;CL:0002024,8.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.07e-16!22;UBERON:0007499!1.07e-16!22;UBERON:0006925!1.07e-16!22;UBERON:0009497!1.07e-16!22;UBERON:0000015!1.07e-16!22;UBERON:0002423!1.07e-16!22;UBERON:0006235!1.07e-16!22;UBERON:0008835!1.07e-16!22;UBERON:0003894!1.07e-16!22;UBERON:0004161!1.07e-16!22;UBERON:0008836!1.07e-16!22;UBERON:0002405!8.47e-16!70;UBERON:0009854!1.30e-15!23;UBERON:0009856!1.30e-15!23;UBERON:0005172!3.80e-14!49;UBERON:0005173!3.80e-14!49;UBERON:0002417!3.80e-14!49;UBERON:0000916!3.80e-14!49;UBERON:0002365!1.02e-13!25;UBERON:0002330!1.02e-13!25;UBERON:0005256!5.90e-09!47;UBERON:0005057!7.67e-09!51;UBERON:0009569!7.71e-09!66;UBERON:0002371!1.27e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.81e-29,22;UBERON:0007499,9.81e-29,22;UBERON:0006925,9.81e-29,22;UBERON:0009497,9.81e-29,22;UBERON:0000015,9.81e-29,22;UBERON:0002423,9.81e-29,22;UBERON:0006235,9.81e-29,22;UBERON:0008835,9.81e-29,22;UBERON:0003894,9.81e-29,22;UBERON:0004161,9.81e-29,22;UBERON:0008836,9.81e-29,22;UBERON:0009854,2.83e-27,23;UBERON:0009856,2.83e-27,23;UBERON:0002365,1.05e-24,25;UBERON:0002330,1.05e-24,25;UBERON:0005172,2.45e-16,49;UBERON:0005173,2.45e-16,49;UBERON:0002417,2.45e-16,49;UBERON:0000916,2.45e-16,49;UBERON:0002371,6.02e-14,16;UBERON:0005256,1.25e-11,45;UBERON:0003914,6.08e-11,47;UBERON:0009569,1.11e-10,66;UBERON:0001474,1.80e-09,22;UBERON:0004765,1.80e-09,22;UBERON:0001434,1.80e-09,22;UBERON:0001041,8.97e-09,80;UBERON:0003929,1.06e-08,55;UBERON:0005177,4.91e-08,79;UBERON:0002368,1.29e-07,60;UBERON:0002193,1.68e-07,48;UBERON:0002405,1.68e-07,48;UBERON:0003104,2.03e-07,61;UBERON:0009142,2.03e-07,61;UBERON:0002390,4.31e-07,45;UBERON:0003061,4.31e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32908547449759,4.45445588257617,4.19737126876888,1.57731082679119,1.37114433605739,3.39511721438424,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,15.2982951937838,22.7439263390404,18.4724829885986,20.0732074047331,3.07374644257244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.869593466105033,22.371020801516,0,0,3.24888208723835,2.68816132258401,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.48439043634778,5.17875767294343,0.890652834388949,0,0.913396434936424,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.722996784599558,0.884610551949874,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,15.4155366085317,0.333690211432188,2.75182593158484,3.82265591054251,9.12870546248263,9.88826354984909,10.6942857748196,7.76779571117189,7.62035565842666,8.51140380883053,25.8782771749238,36.4698128715133,9.67316786655138,10.1031551178845,8.96987067609561,13.0259750768109,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.534196811001766,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0.291480836629851,0,7.86006051670122,0,0.370389054739423,1.88368457004691,2.32380187125743,13.7266903923914,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0.655087691238533,0.269728692769641,2.23164330458407,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,1.21553358534147,2.72497111416377,1.10306105070008,0.888986911206461,0.206035057238894,0.320919209591815,0,0.25347929989024,0.754505365544305,0.842773567228942,0.384150914429216,0.574354689556133,0.476293691283074,0.579421629724277,0.578727661391115,0,0.735994600671987,0.685738504770831,0.354951612318675,0.715308569841963,1.45346416632329,0.752875043322645,0.761531471025089,1.09756783723664,0,0.814824683075171,1.12228454331548,1.42362021749009,0.788035859004508,0,0.309873682371932,1.15743966588685,0,0.701794825336225,1.07435527024149,0.191288332068843,0.441182838239031,0 | |||
|short_description=p3@Cd5l | |||
}} |
Revision as of 02:59, 4 August 2015
Short description: | p3@Cd5l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cd5l_5end |
Coexpression cluster: | MCL_coexpression_mm9:3422 |
Association with transcript: | 82bp_to_ENSMUST00000015998, NM_009690, uc008psa.2_5end |
EntrezGene: | 11801 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.08e-11 | 6 |
megakaryocyte | 2.08e-11 | 6 |
myeloid lineage restricted progenitor cell | 9.07e-09 | 13 |
bone marrow cell | 6.93e-08 | 3 |
mesenchymal stem cell of the bone marrow | 6.93e-08 | 3 |
megakaryocyte-erythroid progenitor cell | 2.28e-07 | 9 |
myeloid cell | 7.24e-07 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 8.18e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.18e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 9.81e-29 | 22 |
epithelial sac | 9.81e-29 | 22 |
digestive gland | 9.81e-29 | 22 |
epithelium of foregut-midgut junction | 9.81e-29 | 22 |
anatomical boundary | 9.81e-29 | 22 |
hepatobiliary system | 9.81e-29 | 22 |
foregut-midgut junction | 9.81e-29 | 22 |
hepatic diverticulum | 9.81e-29 | 22 |
liver primordium | 9.81e-29 | 22 |
septum transversum | 9.81e-29 | 22 |
liver bud | 9.81e-29 | 22 |
digestive tract diverticulum | 2.83e-27 | 23 |
sac | 2.83e-27 | 23 |
exocrine gland | 1.05e-24 | 25 |
exocrine system | 1.05e-24 | 25 |
abdomen element | 2.45e-16 | 49 |
abdominal segment element | 2.45e-16 | 49 |
abdominal segment of trunk | 2.45e-16 | 49 |
abdomen | 2.45e-16 | 49 |
bone marrow | 6.02e-14 | 16 |
trunk mesenchyme | 1.25e-11 | 45 |
epithelial tube | 6.08e-11 | 47 |
subdivision of trunk | 1.11e-10 | 66 |
bone element | 1.80e-09 | 22 |
skeletal element | 1.80e-09 | 22 |
skeletal system | 1.80e-09 | 22 |
foregut | 8.97e-09 | 80 |
gut epithelium | 1.06e-08 | 55 |
trunk region element | 4.91e-08 | 79 |
endocrine gland | 1.29e-07 | 60 |
hemolymphoid system | 1.68e-07 | 48 |
immune system | 1.68e-07 | 48 |
mesenchyme | 2.03e-07 | 61 |
entire embryonic mesenchyme | 2.03e-07 | 61 |
hematopoietic system | 4.31e-07 | 45 |
blood island | 4.31e-07 | 45 |