FFCP PHASE1:Mm9::chr3:89018251..89018294,-: Difference between revisions
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{{FFCP|EntrezGene=17827|HGNC=|MCL_coexpression_id=0|UniProt=D3YVW0,Q8R5C0,F7C846,D3Z3F4|association_with_transcript=0bp_to_ENSMUST00000118964,ENSMUST00000171495,NM_001161824,NM_013604,uc008pye.2,uc008pyf.2,uc012csi.1_5end|description=CAGE_peak_2_at_Mtx1_5end|id=chr3:89018251..89018294,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!3.94e-12!39;UBERON:0001890!3.94e-12!39;UBERON:0006240!3.94e-12!39;UBERON:0003080!1.59e-11!40;UBERON:0000955!8.39e-11!50;UBERON:0006238!8.39e-11!50;UBERON:0002616!3.55e-10!49;UBERON:0003056!5.67e-10!49;UBERON:0000033!1.00e-09!63;UBERON:0000956!2.54e-09!21;UBERON:0001869!2.54e-09!21;UBERON:0000203!2.54e-09!21;UBERON:0001017!3.92e-09!73;UBERON:0005743!3.92e-09!73;UBERON:0001049!4.11e-09!52;UBERON:0005068!4.11e-09!52;UBERON:0006241!4.11e-09!52;UBERON:0007135!4.11e-09!52;UBERON:0002619!7.04e-09!17;UBERON:0000073!1.72e-08!75;UBERON:0001016!1.72e-08!75;UBERON:0002791!9.66e-08!29;UBERON:0003528!9.66e-08!29;UBERON:0001893!9.66e-08!29;UBERON:0004121!4.93e-07!102;UBERON:0000924!4.93e-07!102;UBERON:0006601!4.93e-07!102;UBERON:0002020!5.43e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.57e-15,15;UBERON:0003101,4.99e-14,16;UBERON:0000079,4.99e-14,16;UBERON:0000473,2.08e-11,14;UBERON:0004176,2.20e-09,17;UBERON:0009196,2.20e-09,17;UBERON:0009117,2.20e-09,17;UBERON:0003133,3.00e-09,24;UBERON:0000991,7.39e-09,18;UBERON:0005564,7.39e-09,18;UBERON:0005156,1.64e-08,26;UBERON:0000990,1.64e-08,26|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,66.1636797375323,0,0,0,0,0,0.86152399231815,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,1.1665793944457,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0.449949858640699,0,0,0.299600110518405,2.68952813725088,0.414758449233911,0.405017814995072,0.210324961351382,0.571301968807607,0,0.367472397644862,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.923204014111357,0.731901148819277,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,8.14577636764161,0,0,0,0,0,0,0,0,0,0,7.87868770061514,0,0,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0,0,0.251308704225729,0,0.511430914660661,0.62336413367868,0.162241263067758,0.203678727700633,0.373220911830279,1.76905930903572,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,0.177340233642274,0.713475270408282,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,535.508291749981,0,0,0.583353565032143,0.774958940866387,1.18269287843545,0.352071715937262,0.13020438484395,1.04859344425711,59.1881096023715,196.148434261606,0,0,0,0,0.358053391334963,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,1.84130094602871,2.86447756719698,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.644613162144895,0,0.220591419119515,0.231867835620421|short_description=p2@Mtx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17827 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YVW0,uniprot:Q8R5C0,uniprot:F7C846,uniprot:D3Z3F4 | |||
|association_with_transcript=0bp_to_ENSMUST00000118964,ENSMUST00000171495,NM_001161824,NM_013604,uc008pye.2,uc008pyf.2,uc012csi.1_5end | |||
|cluster_id=chr3:89018251..89018294,- | |||
|description=CAGE_peak_2_at_Mtx1_5end | |||
|id=chr3:89018251..89018294,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.94e-12!39;UBERON:0001890!3.94e-12!39;UBERON:0006240!3.94e-12!39;UBERON:0003080!1.59e-11!40;UBERON:0000955!8.39e-11!50;UBERON:0006238!8.39e-11!50;UBERON:0002616!3.55e-10!49;UBERON:0003056!5.67e-10!49;UBERON:0000033!1.00e-09!63;UBERON:0000956!2.54e-09!21;UBERON:0001869!2.54e-09!21;UBERON:0000203!2.54e-09!21;UBERON:0001017!3.92e-09!73;UBERON:0005743!3.92e-09!73;UBERON:0001049!4.11e-09!52;UBERON:0005068!4.11e-09!52;UBERON:0006241!4.11e-09!52;UBERON:0007135!4.11e-09!52;UBERON:0002619!7.04e-09!17;UBERON:0000073!1.72e-08!75;UBERON:0001016!1.72e-08!75;UBERON:0002791!9.66e-08!29;UBERON:0003528!9.66e-08!29;UBERON:0001893!9.66e-08!29;UBERON:0004121!4.93e-07!102;UBERON:0000924!4.93e-07!102;UBERON:0006601!4.93e-07!102;UBERON:0002020!5.43e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.57e-15,15;UBERON:0003101,4.99e-14,16;UBERON:0000079,4.99e-14,16;UBERON:0000473,2.08e-11,14;UBERON:0004176,2.20e-09,17;UBERON:0009196,2.20e-09,17;UBERON:0009117,2.20e-09,17;UBERON:0003133,3.00e-09,24;UBERON:0000991,7.39e-09,18;UBERON:0005564,7.39e-09,18;UBERON:0005156,1.64e-08,26;UBERON:0000990,1.64e-08,26 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0,0.234064526321993,0,0,0.171200729931206,0.262261207256992,0,0,0,0,0,0,66.1636797375323,0,0,0,0,0,0.86152399231815,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.659058548203415,1.1665793944457,0.279972843250725,0,0.167782606057736,0,0.336093799142464,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0.449949858640699,0,0,0.299600110518405,2.68952813725088,0.414758449233911,0.405017814995072,0.210324961351382,0.571301968807607,0,0.367472397644862,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.923204014111357,0.731901148819277,0,0,0,0,0,0,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,8.14577636764161,0,0,0,0,0,0,0,0,0,0,7.87868770061514,0,0,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0,0,0.251308704225729,0,0.511430914660661,0.62336413367868,0.162241263067758,0.203678727700633,0.373220911830279,1.76905930903572,0,0.390361328888111,0.229902104433473,0.180062129805349,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0.404810701674894,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,0.177340233642274,0.713475270408282,0.164549020602121,0.913394847343798,0,0,0,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0.136694227721025,0,0,0.279902904647316,0.414599921413271,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,535.508291749981,0,0,0.583353565032143,0.774958940866387,1.18269287843545,0.352071715937262,0.13020438484395,1.04859344425711,59.1881096023715,196.148434261606,0,0,0,0,0.358053391334963,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,1.84130094602871,2.86447756719698,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.128050304809739,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.188218760830661,0,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.644613162144895,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Mtx1 | |||
}} |
Revision as of 04:42, 4 August 2015
Short description: | p2@Mtx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mtx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000118964, ENSMUST00000171495, NM_001161824, NM_013604, uc008pye.2, uc008pyf.2, uc012csi.1_5end |
EntrezGene: | 17827 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 5.57e-15 | 15 |
male organism | 4.99e-14 | 16 |
male reproductive system | 4.99e-14 | 16 |
testis | 2.08e-11 | 14 |
external genitalia | 2.20e-09 | 17 |
indifferent external genitalia | 2.20e-09 | 17 |
indifferent gonad | 2.20e-09 | 17 |
reproductive organ | 3.00e-09 | 24 |
gonad | 7.39e-09 | 18 |
gonad primordium | 7.39e-09 | 18 |
reproductive structure | 1.64e-08 | 26 |
reproductive system | 1.64e-08 | 26 |