FFCP PHASE1:Mm9::chr14:37862143..37862156,-: Difference between revisions
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{{FFCP|EntrezGene=57811|HGNC=|MCL_coexpression_id=16|UniProt=Q9Z2B3,Q543X1|association_with_transcript=0bp_to_ENSMUST00000022338,NM_021340,uc007tbp.1,uc007tbq.1,uc011zjb.1_5end|description=CAGE_peak_1_at_Rgr_5end|id=chr14:37862143..37862156,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.99e-11!9;UBERON:0000019!1.99e-11!9;UBERON:0000047!1.99e-11!9;UBERON:0004088!1.99e-11!9;UBERON:0002104!1.99e-11!9;UBERON:0001456!1.99e-11!9;UBERON:0003072!1.99e-11!9;UBERON:0003071!1.99e-11!9;UBERON:0004128!1.99e-11!9;UBERON:0001444!4.30e-09!11;UBERON:0000020!3.22e-08!12;UBERON:0001032!3.22e-08!12;UBERON:0004456!3.22e-08!12;UBERON:0005085!1.76e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.24e-58,9;UBERON:0000019,5.24e-58,9;UBERON:0000047,5.24e-58,9;UBERON:0010312,5.24e-58,9;UBERON:0004088,5.24e-58,9;UBERON:0002104,5.24e-58,9;UBERON:0001456,5.24e-58,9;UBERON:0003072,5.24e-58,9;UBERON:0004128,5.24e-58,9;UBERON:0003071,5.24e-58,9;UBERON:0001444,1.34e-47,11;UBERON:0000020,1.08e-43,12;UBERON:0001032,1.08e-43,12;UBERON:0004456,1.08e-43,12;UBERON:0000033,2.18e-40,13;UBERON:0005085,2.18e-40,13;UBERON:0007811,5.99e-15,36;UBERON:0000153,1.38e-12,43;UBERON:0003056,4.27e-11,49;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,189.397670297827,0,0,0.540186389416048,4.52114453507145,15.6483948048054,22.8042422107033,28.5790259907173,220.415271869641,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.37456602987953,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,0,0,0.231867835620421|short_description=p1@Rgr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57811 | |||
|HGNC= | |||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9Z2B3,uniprot:Q543X1 | |||
|association_with_transcript=0bp_to_ENSMUST00000022338,NM_021340,uc007tbp.1,uc007tbq.1,uc011zjb.1_5end | |||
|cluster_id=chr14:37862143..37862156,- | |||
|description=CAGE_peak_1_at_Rgr_5end | |||
|id=chr14:37862143..37862156,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.99e-11!9;UBERON:0000019!1.99e-11!9;UBERON:0000047!1.99e-11!9;UBERON:0004088!1.99e-11!9;UBERON:0002104!1.99e-11!9;UBERON:0001456!1.99e-11!9;UBERON:0003072!1.99e-11!9;UBERON:0003071!1.99e-11!9;UBERON:0004128!1.99e-11!9;UBERON:0001444!4.30e-09!11;UBERON:0000020!3.22e-08!12;UBERON:0001032!3.22e-08!12;UBERON:0004456!3.22e-08!12;UBERON:0005085!1.76e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.24e-58,9;UBERON:0000019,5.24e-58,9;UBERON:0000047,5.24e-58,9;UBERON:0010312,5.24e-58,9;UBERON:0004088,5.24e-58,9;UBERON:0002104,5.24e-58,9;UBERON:0001456,5.24e-58,9;UBERON:0003072,5.24e-58,9;UBERON:0004128,5.24e-58,9;UBERON:0003071,5.24e-58,9;UBERON:0001444,1.34e-47,11;UBERON:0000020,1.08e-43,12;UBERON:0001032,1.08e-43,12;UBERON:0004456,1.08e-43,12;UBERON:0000033,2.18e-40,13;UBERON:0005085,2.18e-40,13;UBERON:0007811,5.99e-15,36;UBERON:0000153,1.38e-12,43;UBERON:0003056,4.27e-11,49;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,189.397670297827,0,0,0.540186389416048,4.52114453507145,15.6483948048054,22.8042422107033,28.5790259907173,220.415271869641,0,0,0,0,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.37456602987953,0.384150914429216,0.229741875822453,0.476293691283074,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.436039249896986,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,0,0,0.231867835620421 | |||
|short_description=p1@Rgr | |||
}} |
Revision as of 07:19, 4 August 2015
Short description: | p1@Rgr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rgr_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 0bp_to_ENSMUST00000022338, NM_021340, uc007tbp.1, uc007tbq.1, uc011zjb.1_5end |
EntrezGene: | 57811 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 5.24e-58 | 9 |
camera-type eye | 5.24e-58 | 9 |
simple eye | 5.24e-58 | 9 |
immature eye | 5.24e-58 | 9 |
ocular region | 5.24e-58 | 9 |
visual system | 5.24e-58 | 9 |
face | 5.24e-58 | 9 |
optic cup | 5.24e-58 | 9 |
optic vesicle | 5.24e-58 | 9 |
eye primordium | 5.24e-58 | 9 |
subdivision of head | 1.34e-47 | 11 |
sense organ | 1.08e-43 | 12 |
sensory system | 1.08e-43 | 12 |
entire sense organ system | 1.08e-43 | 12 |
head | 2.18e-40 | 13 |
ectodermal placode | 2.18e-40 | 13 |
craniocervical region | 5.99e-15 | 36 |
anterior region of body | 1.38e-12 | 43 |
pre-chordal neural plate | 4.27e-11 | 49 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |