FFCP PHASE1:Mm9::chr11:90120717..90120749,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:90120717..90120749,+|id=chr11:90120717..90120749,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.32e-12!25;UBERON:0002330!2.32e-12!25;UBERON:0002107!7.07e-12!22;UBERON:0007499!7.07e-12!22;UBERON:0006925!7.07e-12!22;UBERON:0009497!7.07e-12!22;UBERON:0000015!7.07e-12!22;UBERON:0002423!7.07e-12!22;UBERON:0006235!7.07e-12!22;UBERON:0008835!7.07e-12!22;UBERON:0003894!7.07e-12!22;UBERON:0004161!7.07e-12!22;UBERON:0008836!7.07e-12!22;UBERON:0009854!5.28e-11!23;UBERON:0009856!5.28e-11!23;UBERON:0009569!6.82e-09!66;UBERON:0005256!7.40e-08!47;UBERON:0005172!8.11e-07!49;UBERON:0005173!8.11e-07!49;UBERON:0002417!8.11e-07!49;UBERON:0000916!8.11e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.95e-35,22;UBERON:0007499,4.95e-35,22;UBERON:0006925,4.95e-35,22;UBERON:0009497,4.95e-35,22;UBERON:0000015,4.95e-35,22;UBERON:0002423,4.95e-35,22;UBERON:0006235,4.95e-35,22;UBERON:0008835,4.95e-35,22;UBERON:0003894,4.95e-35,22;UBERON:0004161,4.95e-35,22;UBERON:0008836,4.95e-35,22;UBERON:0002365,4.16e-34,25;UBERON:0002330,4.16e-34,25;UBERON:0009854,2.44e-33,23;UBERON:0009856,2.44e-33,23;UBERON:0003914,2.18e-16,47;UBERON:0005256,3.90e-15,45;UBERON:0009569,1.51e-14,66;UBERON:0005911,1.03e-13,69;UBERON:0005172,1.39e-13,49;UBERON:0005173,1.39e-13,49;UBERON:0002417,1.39e-13,49;UBERON:0000916,1.39e-13,49;UBERON:0005177,1.16e-12,79;UBERON:0002530,4.72e-12,65;UBERON:0002368,7.03e-12,60;UBERON:0003929,1.10e-11,55;UBERON:0001041,3.47e-11,80;UBERON:0002100,1.59e-10,90;UBERON:0000949,2.09e-10,72;UBERON:0003104,3.69e-10,61;UBERON:0009142,3.69e-10,61;UBERON:0000490,4.20e-09,66;UBERON:0000025,2.15e-08,114;UBERON:0004111,1.62e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,2.03991400112325,4.31762553310254,2.59910566979068,3.58421509677868,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.82694207550496,0.258937883647172,0.148442139064825,0,0,0,0,0.823120949949934,0.376999773989026,0,6.36237170447611,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,3.15662783829711,0,0,0,0.150704817835715,0.204109497453984,0,0,0.776110112217047,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0,0.123397163921801,3.26097889795864,0,0,0,0.811440485554012,1.92941727801933,1.78238096246994,4.02774592431135,5.5125977103512,2.74561413188081,11.5014565221884,4.46569137202204,4.36852742360385,5.80931419278357,2.87035861635059,7.71909634181387,0.923765950833023,0.189491411770485,0,0.339490171550376,0,0.335012514883631,0.476087281772027,1.17080188714679,0,0,0.318909537314974,1.96635977658886,1.55416483679306,1.44649058581512,0,0,1.96705709207614,0.827810238914197,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,3.40439605753788,0.18006109403131,0,0,0,0.535106452806212,0.822745103010605,0.304464949114599,0,0.21183207086382,0,1.6488625294148,1.13025098687134,0.482503399425247,0.477489376012546,0.492422699235184,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0,0.578574190077352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.936415074698824,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.73171189149109,0,0.271608227691724,0,0.237270036248348,0.394017929502254,2.04615521584845,0.309873682371932,0.578719832943424,0,0.935726433781634,0.859484216193193,1.72159498861959,0.220591419119515,0.463735671240843|short_description=p@chr11:90120717..90120749,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:90120717..90120749,+ | |||
|description=CAGE_peak_at_chr11:90120717..90120749,+ | |||
|id=chr11:90120717..90120749,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.24e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!2.32e-12!25;UBERON:0002330!2.32e-12!25;UBERON:0002107!7.07e-12!22;UBERON:0007499!7.07e-12!22;UBERON:0006925!7.07e-12!22;UBERON:0009497!7.07e-12!22;UBERON:0000015!7.07e-12!22;UBERON:0002423!7.07e-12!22;UBERON:0006235!7.07e-12!22;UBERON:0008835!7.07e-12!22;UBERON:0003894!7.07e-12!22;UBERON:0004161!7.07e-12!22;UBERON:0008836!7.07e-12!22;UBERON:0009854!5.28e-11!23;UBERON:0009856!5.28e-11!23;UBERON:0009569!6.82e-09!66;UBERON:0005256!7.40e-08!47;UBERON:0005172!8.11e-07!49;UBERON:0005173!8.11e-07!49;UBERON:0002417!8.11e-07!49;UBERON:0000916!8.11e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.95e-35,22;UBERON:0007499,4.95e-35,22;UBERON:0006925,4.95e-35,22;UBERON:0009497,4.95e-35,22;UBERON:0000015,4.95e-35,22;UBERON:0002423,4.95e-35,22;UBERON:0006235,4.95e-35,22;UBERON:0008835,4.95e-35,22;UBERON:0003894,4.95e-35,22;UBERON:0004161,4.95e-35,22;UBERON:0008836,4.95e-35,22;UBERON:0002365,4.16e-34,25;UBERON:0002330,4.16e-34,25;UBERON:0009854,2.44e-33,23;UBERON:0009856,2.44e-33,23;UBERON:0003914,2.18e-16,47;UBERON:0005256,3.90e-15,45;UBERON:0009569,1.51e-14,66;UBERON:0005911,1.03e-13,69;UBERON:0005172,1.39e-13,49;UBERON:0005173,1.39e-13,49;UBERON:0002417,1.39e-13,49;UBERON:0000916,1.39e-13,49;UBERON:0005177,1.16e-12,79;UBERON:0002530,4.72e-12,65;UBERON:0002368,7.03e-12,60;UBERON:0003929,1.10e-11,55;UBERON:0001041,3.47e-11,80;UBERON:0002100,1.59e-10,90;UBERON:0000949,2.09e-10,72;UBERON:0003104,3.69e-10,61;UBERON:0009142,3.69e-10,61;UBERON:0000490,4.20e-09,66;UBERON:0000025,2.15e-08,114;UBERON:0004111,1.62e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.65407546914134,0.659058548203415,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30211938490693,2.03991400112325,4.31762553310254,2.59910566979068,3.58421509677868,1.26399978118577,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.82694207550496,0.258937883647172,0.148442139064825,0,0,0,0,0.823120949949934,0.376999773989026,0,6.36237170447611,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,0.252722758433675,3.15662783829711,0,0,0,0.150704817835715,0.204109497453984,0,0,0.776110112217047,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.402619256281115,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0,0,0.210407459670956,0.189709611372772,0.147610147979602,0,0.123397163921801,3.26097889795864,0,0,0,0.811440485554012,1.92941727801933,1.78238096246994,4.02774592431135,5.5125977103512,2.74561413188081,11.5014565221884,4.46569137202204,4.36852742360385,5.80931419278357,2.87035861635059,7.71909634181387,0.923765950833023,0.189491411770485,0,0.339490171550376,0,0.335012514883631,0.476087281772027,1.17080188714679,0,0,0.318909537314974,1.96635977658886,1.55416483679306,1.44649058581512,0,0,1.96705709207614,0.827810238914197,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0.395287777946524,0,0,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.775284879504663,0,0,0.316036757935816,0,0,3.40439605753788,0.18006109403131,0,0,0,0.535106452806212,0.822745103010605,0.304464949114599,0,0.21183207086382,0,1.6488625294148,1.13025098687134,0.482503399425247,0.477489376012546,0.492422699235184,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0,0.578574190077352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.729320151204882,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.936415074698824,0.384150914429216,0.402048282689293,0.476293691283074,0.463537303779422,0.192909220463705,0.824171801606613,0.147198920134397,0,0.532427418478012,0.238436189947321,0.145346416632329,0.470546902076653,0.423073039458382,0.73171189149109,0,0.271608227691724,0,0.237270036248348,0.394017929502254,2.04615521584845,0.309873682371932,0.578719832943424,0,0.935726433781634,0.859484216193193,1.72159498861959,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr11:90120717..90120749,+ | |||
}} |
Latest revision as of 08:00, 4 August 2015
Short description: | p@chr11:90120717..90120749, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:90120717..90120749, + |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.24e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 4.95e-35 | 22 |
epithelial sac | 4.95e-35 | 22 |
digestive gland | 4.95e-35 | 22 |
epithelium of foregut-midgut junction | 4.95e-35 | 22 |
anatomical boundary | 4.95e-35 | 22 |
hepatobiliary system | 4.95e-35 | 22 |
foregut-midgut junction | 4.95e-35 | 22 |
hepatic diverticulum | 4.95e-35 | 22 |
liver primordium | 4.95e-35 | 22 |
septum transversum | 4.95e-35 | 22 |
liver bud | 4.95e-35 | 22 |
exocrine gland | 4.16e-34 | 25 |
exocrine system | 4.16e-34 | 25 |
digestive tract diverticulum | 2.44e-33 | 23 |
sac | 2.44e-33 | 23 |
epithelial tube | 2.18e-16 | 47 |
trunk mesenchyme | 3.90e-15 | 45 |
subdivision of trunk | 1.51e-14 | 66 |
endo-epithelium | 1.03e-13 | 69 |
abdomen element | 1.39e-13 | 49 |
abdominal segment element | 1.39e-13 | 49 |
abdominal segment of trunk | 1.39e-13 | 49 |
abdomen | 1.39e-13 | 49 |
trunk region element | 1.16e-12 | 79 |
gland | 4.72e-12 | 65 |
endocrine gland | 7.03e-12 | 60 |
gut epithelium | 1.10e-11 | 55 |
foregut | 3.47e-11 | 80 |
trunk | 1.59e-10 | 90 |
endocrine system | 2.09e-10 | 72 |
mesenchyme | 3.69e-10 | 61 |
entire embryonic mesenchyme | 3.69e-10 | 61 |
unilaminar epithelium | 4.20e-09 | 66 |
tube | 2.15e-08 | 114 |
anatomical conduit | 1.62e-07 | 122 |