FFCP PHASE1:Mm9::chr11:94622225..94622231,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=217122|HGNC=|MCL_coexpression_id=58|UniProt=Q3TDT7|association_with_transcript=264bp_to_ENSMUST00000100556,NM_001105561,uc007kzk.2_5end|description=CAGE_peak_3_at_Gm11545_5end|id=chr11:94622225..94622231,-|ontology_enrichment_celltype=CL:0002563!7.01e-15!9;CL:0002251!7.01e-15!9;CL:0000239!1.97e-13!6;CL:0000677!1.97e-13!6;CL:0000212!1.97e-13!6;CL:0000584!1.97e-13!6;CL:0000075!2.19e-11!7;CL:0000066!7.42e-09!25;CL:0002076!2.67e-08!15;CL:0000473!4.16e-08!3;CL:0000627!4.16e-08!3;CL:0000682!4.16e-08!3|ontology_enrichment_celltype_v019_2=CL:0000682,1.42e-23,3;CL:0000239,1.04e-11,6;CL:0000677,1.04e-11,6;CL:0000584,1.04e-11,6;CL:0000066,1.26e-10,25;CL:0000473,1.82e-10,7;CL:0000075,4.03e-10,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.89e-26!15;UBERON:0000160!1.94e-23!43;UBERON:0001242!3.22e-22!13;UBERON:0000060!3.22e-22!13;UBERON:0001262!3.22e-22!13;UBERON:0004786!3.22e-22!13;UBERON:0005409!6.54e-20!59;UBERON:0004923!4.61e-15!24;UBERON:0003350!7.01e-15!9;UBERON:0004808!7.01e-15!9;UBERON:0001277!7.01e-15!9;UBERON:0000485!6.93e-12!11;UBERON:0002465!3.19e-07!3;UBERON:0001007!3.73e-07!128;UBERON:0001555!3.73e-07!128;UBERON:0007026!3.73e-07!128;UBERON:0000331!4.67e-07!3;UBERON:0002116!4.67e-07!3;UBERON:0001204!4.67e-07!3;UBERON:0001168!4.67e-07!3;UBERON:0004119!6.10e-07!130;UBERON:0000925!6.10e-07!130;UBERON:0006595!6.10e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.29e-17,15;UBERON:0001962,4.36e-15,2;UBERON:0001961,4.36e-15,2;UBERON:0001744,4.36e-15,2;UBERON:0000160,3.84e-11,31;UBERON:0004923,1.09e-10,24;UBERON:0002465,2.21e-10,3;UBERON:0001242,2.33e-09,13;UBERON:0001262,2.33e-09,13;UBERON:0004786,2.33e-09,13;UBERON:0003199,2.06e-08,1;UBERON:0002108,3.16e-08,4;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0005409,3.47e-07,47|phase1_expression=0,2.09385244583617,3.63999391511629,0.60492842261366,1.50268718983904,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,2.8711598205751,4.73838195774982,4.52489588640367,0.760093677825496,0.252030129759931,1.55211357458713,0,0,0,0.288851619751275,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.64450566663544,0,0,0,0.403367049246685,0,0.951128130562796,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p3@Gm11545}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217122 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TDT7 | |||
|association_with_transcript=264bp_to_ENSMUST00000100556,NM_001105561,uc007kzk.2_5end | |||
|cluster_id=chr11:94622225..94622231,- | |||
|description=CAGE_peak_3_at_Gm11545_5end | |||
|id=chr11:94622225..94622231,- | |||
|ontology_enrichment_celltype=CL:0002563!7.01e-15!9;CL:0002251!7.01e-15!9;CL:0000239!1.97e-13!6;CL:0000677!1.97e-13!6;CL:0000212!1.97e-13!6;CL:0000584!1.97e-13!6;CL:0000075!2.19e-11!7;CL:0000066!7.42e-09!25;CL:0002076!2.67e-08!15;CL:0000473!4.16e-08!3;CL:0000627!4.16e-08!3;CL:0000682!4.16e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.42e-23,3;CL:0000239,1.04e-11,6;CL:0000677,1.04e-11,6;CL:0000584,1.04e-11,6;CL:0000066,1.26e-10,25;CL:0000473,1.82e-10,7;CL:0000075,4.03e-10,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.89e-26!15;UBERON:0000160!1.94e-23!43;UBERON:0001242!3.22e-22!13;UBERON:0000060!3.22e-22!13;UBERON:0001262!3.22e-22!13;UBERON:0004786!3.22e-22!13;UBERON:0005409!6.54e-20!59;UBERON:0004923!4.61e-15!24;UBERON:0003350!7.01e-15!9;UBERON:0004808!7.01e-15!9;UBERON:0001277!7.01e-15!9;UBERON:0000485!6.93e-12!11;UBERON:0002465!3.19e-07!3;UBERON:0001007!3.73e-07!128;UBERON:0001555!3.73e-07!128;UBERON:0007026!3.73e-07!128;UBERON:0000331!4.67e-07!3;UBERON:0002116!4.67e-07!3;UBERON:0001204!4.67e-07!3;UBERON:0001168!4.67e-07!3;UBERON:0004119!6.10e-07!130;UBERON:0000925!6.10e-07!130;UBERON:0006595!6.10e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.29e-17,15;UBERON:0001962,4.36e-15,2;UBERON:0001961,4.36e-15,2;UBERON:0001744,4.36e-15,2;UBERON:0000160,3.84e-11,31;UBERON:0004923,1.09e-10,24;UBERON:0002465,2.21e-10,3;UBERON:0001242,2.33e-09,13;UBERON:0001262,2.33e-09,13;UBERON:0004786,2.33e-09,13;UBERON:0003199,2.06e-08,1;UBERON:0002108,3.16e-08,4;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9;UBERON:0005409,3.47e-07,47 | |||
|phase1_expression=0,2.09385244583617,3.63999391511629,0.60492842261366,1.50268718983904,0.839396359559449,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27993938234725,1.37645568640302,2.8711598205751,4.73838195774982,4.52489588640367,0.760093677825496,0.252030129759931,1.55211357458713,0,0,0,0.288851619751275,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,2.64450566663544,0,0,0,0.403367049246685,0,0.951128130562796,0,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p3@Gm11545 | |||
}} |
Revision as of 08:59, 4 August 2015
Short description: | p3@Gm11545 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm11545_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 264bp_to_ENSMUST00000100556, NM_001105561, uc007kzk.2_5end |
EntrezGene: | 217122 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.42e-23 | 3 |
brush border epithelial cell | 1.04e-11 | 6 |
gut absorptive cell | 1.04e-11 | 6 |
enterocyte | 1.04e-11 | 6 |
epithelial cell | 1.26e-10 | 25 |
defensive cell | 1.82e-10 | 7 |
columnar/cuboidal epithelial cell | 4.03e-10 | 7 |
intestinal epithelial cell | 5.41e-08 | 9 |
epithelial cell of alimentary canal | 5.41e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.29e-17 | 15 |
gut-associated lymphoid tissue | 4.36e-15 | 2 |
mucosa-associated lymphoid tissue | 4.36e-15 | 2 |
lymphoid tissue | 4.36e-15 | 2 |
intestine | 3.84e-11 | 31 |
organ component layer | 1.09e-10 | 24 |
lymphoid system | 2.21e-10 | 3 |
intestinal mucosa | 2.33e-09 | 13 |
wall of intestine | 2.33e-09 | 13 |
gastrointestinal system mucosa | 2.33e-09 | 13 |
egg chamber | 2.06e-08 | 1 |
small intestine | 3.16e-08 | 4 |
epithelium of mucosa | 5.41e-08 | 9 |
gastrointestinal system epithelium | 5.41e-08 | 9 |
intestinal epithelium | 5.41e-08 | 9 |
gastrointestinal system | 3.47e-07 | 47 |