FFCP PHASE1:Mm9::chr4:100151781..100151786,+: Difference between revisions
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{{FFCP|EntrezGene=381534|HGNC=|MCL_coexpression_id=179|UniProt=Q3V081,B1AUC4,B7ZWG1|association_with_transcript=309bp_to_ENSMUST00000092730,ENSMUST00000133493,NM_001033773,uc008tve.1,uc012dhj.1_5end|description=CAGE_peak_5_at_Ube2u_5end|id=chr4:100151781..100151786,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.08e-12,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!1.88e-20!14;UBERON:0003918!1.88e-20!14;UBERON:0005095!1.88e-20!14;UBERON:0007687!1.88e-20!14;UBERON:0005172!1.42e-19!49;UBERON:0005173!1.42e-19!49;UBERON:0002417!1.42e-19!49;UBERON:0000916!1.42e-19!49;UBERON:0006554!8.82e-18!16;UBERON:0001008!1.11e-16!17;UBERON:0009569!6.10e-14!66;UBERON:0000489!2.54e-13!21;UBERON:0005177!2.70e-10!85;UBERON:0002107!4.66e-10!22;UBERON:0007499!4.66e-10!22;UBERON:0006925!4.66e-10!22;UBERON:0009497!4.66e-10!22;UBERON:0000015!4.66e-10!22;UBERON:0002423!4.66e-10!22;UBERON:0006235!4.66e-10!22;UBERON:0008835!4.66e-10!22;UBERON:0003894!4.66e-10!22;UBERON:0004161!4.66e-10!22;UBERON:0008836!4.66e-10!22;UBERON:0009854!1.38e-09!23;UBERON:0009856!1.38e-09!23;UBERON:0002365!9.28e-09!25;UBERON:0002330!9.28e-09!25;UBERON:0002100!1.31e-08!98|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0002113,3.81e-10,14;UBERON:0003918,3.81e-10,14;UBERON:0011143,3.81e-10,14;UBERON:0005095,3.81e-10,14;UBERON:0007687,3.81e-10,14;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0009569,2.50e-08,66;UBERON:0006554,4.78e-08,18;UBERON:0001008,1.17e-07,19;UBERON:0005177,5.28e-07,79;UBERON:0000489,5.44e-07,21|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.280543279561274,0.252946148497029,1.32849133181642,1.255989822731,1.97435462274881,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,1.07638448113147,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Ube2u}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:381534 | |||
|HGNC= | |||
|MCL_coexpression_id=179 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3V081,uniprot:B1AUC4,uniprot:B7ZWG1 | |||
|association_with_transcript=309bp_to_ENSMUST00000092730,ENSMUST00000133493,NM_001033773,uc008tve.1,uc012dhj.1_5end | |||
|cluster_id=chr4:100151781..100151786,+ | |||
|description=CAGE_peak_5_at_Ube2u_5end | |||
|id=chr4:100151781..100151786,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.08e-12,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!1.88e-20!14;UBERON:0003918!1.88e-20!14;UBERON:0005095!1.88e-20!14;UBERON:0007687!1.88e-20!14;UBERON:0005172!1.42e-19!49;UBERON:0005173!1.42e-19!49;UBERON:0002417!1.42e-19!49;UBERON:0000916!1.42e-19!49;UBERON:0006554!8.82e-18!16;UBERON:0001008!1.11e-16!17;UBERON:0009569!6.10e-14!66;UBERON:0000489!2.54e-13!21;UBERON:0005177!2.70e-10!85;UBERON:0002107!4.66e-10!22;UBERON:0007499!4.66e-10!22;UBERON:0006925!4.66e-10!22;UBERON:0009497!4.66e-10!22;UBERON:0000015!4.66e-10!22;UBERON:0002423!4.66e-10!22;UBERON:0006235!4.66e-10!22;UBERON:0008835!4.66e-10!22;UBERON:0003894!4.66e-10!22;UBERON:0004161!4.66e-10!22;UBERON:0008836!4.66e-10!22;UBERON:0009854!1.38e-09!23;UBERON:0009856!1.38e-09!23;UBERON:0002365!9.28e-09!25;UBERON:0002330!9.28e-09!25;UBERON:0002100!1.31e-08!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,4.27e-11,49;UBERON:0005173,4.27e-11,49;UBERON:0002417,4.27e-11,49;UBERON:0000916,4.27e-11,49;UBERON:0002113,3.81e-10,14;UBERON:0003918,3.81e-10,14;UBERON:0011143,3.81e-10,14;UBERON:0005095,3.81e-10,14;UBERON:0007687,3.81e-10,14;UBERON:0003104,5.52e-09,61;UBERON:0009142,5.52e-09,61;UBERON:0009569,2.50e-08,66;UBERON:0006554,4.78e-08,18;UBERON:0001008,1.17e-07,19;UBERON:0005177,5.28e-07,79;UBERON:0000489,5.44e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29955283489534,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.280543279561274,0.252946148497029,1.32849133181642,1.255989822731,1.97435462274881,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,1.07638448113147,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Ube2u | |||
}} |
Revision as of 10:36, 4 August 2015
Short description: | p5@Ube2u |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ube2u_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | 309bp_to_ENSMUST00000092730, ENSMUST00000133493, NM_001033773, uc008tve.1, uc012dhj.1_5end |
EntrezGene: | 381534 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.08e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 4.27e-11 | 49 |
abdominal segment element | 4.27e-11 | 49 |
abdominal segment of trunk | 4.27e-11 | 49 |
abdomen | 4.27e-11 | 49 |
kidney | 3.81e-10 | 14 |
kidney mesenchyme | 3.81e-10 | 14 |
upper urinary tract | 3.81e-10 | 14 |
kidney rudiment | 3.81e-10 | 14 |
kidney field | 3.81e-10 | 14 |
mesenchyme | 5.52e-09 | 61 |
entire embryonic mesenchyme | 5.52e-09 | 61 |
subdivision of trunk | 2.50e-08 | 66 |
urinary system structure | 4.78e-08 | 18 |
renal system | 1.17e-07 | 19 |
trunk region element | 5.28e-07 | 79 |
cavitated compound organ | 5.44e-07 | 21 |