FFCP PHASE1:Mm9::chr11:96797681..96797709,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:96797681..96797709,-|id=chr11:96797681..96797709,-|ontology_enrichment_celltype=CL:0002563!1.95e-24!9;CL:0002251!1.95e-24!9;CL:0000066!6.28e-19!25;CL:0000239!1.84e-16!6;CL:0000677!1.84e-16!6;CL:0000212!1.84e-16!6;CL:0000584!1.84e-16!6;CL:0000075!5.33e-14!7;CL:0002076!6.35e-14!15;CL:0000223!2.48e-12!20;CL:0002250!1.50e-09!3;CL:0000473!4.82e-09!3;CL:0000627!4.82e-09!3;CL:0000682!4.82e-09!3|ontology_enrichment_celltype_v019_2=CL:0002563,1.46e-56,9;CL:0002251,1.46e-56,9;CL:0000066,6.60e-38,25;CL:0002076,7.56e-34,15;CL:0000239,5.78e-33,6;CL:0000677,5.78e-33,6;CL:0000584,5.78e-33,6;CL:0000075,2.71e-28,7;CL:0002250,1.46e-25,3;CL:0000223,2.62e-25,20;CL:0000682,4.90e-24,3;CL:0000473,1.08e-10,7;CL:0002321,7.42e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!1.95e-24!9;UBERON:0004808!1.95e-24!9;UBERON:0001277!1.95e-24!9;UBERON:0000344!3.78e-24!15;UBERON:0000485!8.30e-24!11;UBERON:0001242!6.49e-20!13;UBERON:0000060!6.49e-20!13;UBERON:0001262!6.49e-20!13;UBERON:0004786!6.49e-20!13;UBERON:0004923!1.50e-16!24;UBERON:0000160!1.40e-12!43;UBERON:0005409!2.69e-09!59|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.46e-56,9;UBERON:0004808,1.46e-56,9;UBERON:0001277,1.46e-56,9;UBERON:0000485,3.03e-46,11;UBERON:0001242,4.28e-39,13;UBERON:0001262,4.28e-39,13;UBERON:0004786,4.28e-39,13;UBERON:0000344,7.56e-34,15;UBERON:0004923,4.98e-21,24;UBERON:0000160,3.47e-16,31;UBERON:0005409,1.66e-10,47;UBERON:0003929,6.78e-09,55;UBERON:0000490,2.60e-07,66;UBERON:0005911,5.77e-07,69|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,1.20985684522732,0.500895729946347,2.35030980676646,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,1.14846392823004,2.15380998079537,1.29282739611533,0.190023419456374,0,0,0,0,0,10.9763615505484,3.32469290716985,10.2084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr11:96797681..96797709,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:96797681..96797709,- | |||
|description=CAGE_peak_at_chr11:96797681..96797709,- | |||
|id=chr11:96797681..96797709,- | |||
|ontology_enrichment_celltype=CL:0002563!1.95e-24!9;CL:0002251!1.95e-24!9;CL:0000066!6.28e-19!25;CL:0000239!1.84e-16!6;CL:0000677!1.84e-16!6;CL:0000212!1.84e-16!6;CL:0000584!1.84e-16!6;CL:0000075!5.33e-14!7;CL:0002076!6.35e-14!15;CL:0000223!2.48e-12!20;CL:0002250!1.50e-09!3;CL:0000473!4.82e-09!3;CL:0000627!4.82e-09!3;CL:0000682!4.82e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.46e-56,9;CL:0002251,1.46e-56,9;CL:0000066,6.60e-38,25;CL:0002076,7.56e-34,15;CL:0000239,5.78e-33,6;CL:0000677,5.78e-33,6;CL:0000584,5.78e-33,6;CL:0000075,2.71e-28,7;CL:0002250,1.46e-25,3;CL:0000223,2.62e-25,20;CL:0000682,4.90e-24,3;CL:0000473,1.08e-10,7;CL:0002321,7.42e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.95e-24!9;UBERON:0004808!1.95e-24!9;UBERON:0001277!1.95e-24!9;UBERON:0000344!3.78e-24!15;UBERON:0000485!8.30e-24!11;UBERON:0001242!6.49e-20!13;UBERON:0000060!6.49e-20!13;UBERON:0001262!6.49e-20!13;UBERON:0004786!6.49e-20!13;UBERON:0004923!1.50e-16!24;UBERON:0000160!1.40e-12!43;UBERON:0005409!2.69e-09!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.46e-56,9;UBERON:0004808,1.46e-56,9;UBERON:0001277,1.46e-56,9;UBERON:0000485,3.03e-46,11;UBERON:0001242,4.28e-39,13;UBERON:0001262,4.28e-39,13;UBERON:0004786,4.28e-39,13;UBERON:0000344,7.56e-34,15;UBERON:0004923,4.98e-21,24;UBERON:0000160,3.47e-16,31;UBERON:0005409,1.66e-10,47;UBERON:0003929,6.78e-09,55;UBERON:0000490,2.60e-07,66;UBERON:0005911,5.77e-07,69 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,1.20985684522732,0.500895729946347,2.35030980676646,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,1.14846392823004,2.15380998079537,1.29282739611533,0.190023419456374,0,0,0,0,0,10.9763615505484,3.32469290716985,10.2084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr11:96797681..96797709,- | |||
}} |
Latest revision as of 10:59, 4 August 2015
Short description: | p@chr11:96797681..96797709, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96797681..96797709, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.46e-56 | 9 |
epithelial cell of alimentary canal | 1.46e-56 | 9 |
epithelial cell | 6.60e-38 | 25 |
endo-epithelial cell | 7.56e-34 | 15 |
brush border epithelial cell | 5.78e-33 | 6 |
gut absorptive cell | 5.78e-33 | 6 |
enterocyte | 5.78e-33 | 6 |
columnar/cuboidal epithelial cell | 2.71e-28 | 7 |
intestinal crypt stem cell | 1.46e-25 | 3 |
endodermal cell | 2.62e-25 | 20 |
M cell of gut | 4.90e-24 | 3 |
defensive cell | 1.08e-10 | 7 |
embryonic cell | 7.42e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.46e-56 | 9 |
gastrointestinal system epithelium | 1.46e-56 | 9 |
intestinal epithelium | 1.46e-56 | 9 |
simple columnar epithelium | 3.03e-46 | 11 |
intestinal mucosa | 4.28e-39 | 13 |
wall of intestine | 4.28e-39 | 13 |
gastrointestinal system mucosa | 4.28e-39 | 13 |
mucosa | 7.56e-34 | 15 |
organ component layer | 4.98e-21 | 24 |
intestine | 3.47e-16 | 31 |
gastrointestinal system | 1.66e-10 | 47 |
gut epithelium | 6.78e-09 | 55 |
unilaminar epithelium | 2.60e-07 | 66 |
endo-epithelium | 5.77e-07 | 69 |