FFCP PHASE1:Mm9::chr9:107490004..107490011,+: Difference between revisions
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{{FFCP|EntrezGene=15983|HGNC=|MCL_coexpression_id=15|UniProt=Q9D8U0|association_with_transcript=-37bp_to_ENSMUST00000010192,NM_025903,uc009rmd.1_5end|description=CAGE_peak_5_at_Ifrd2_5end|id=chr9:107490004..107490011,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,7.64e-14,3;CL:0002006,7.64e-14,3;CL:0002024,7.64e-14,3;CL:0000050,7.15e-12,9;CL:0000839,3.84e-08,13;CL:0000553,3.89e-07,6;CL:0000556,3.89e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!2.87e-07!6;UBERON:0004457!2.87e-07!6;UBERON:0000042!2.87e-07!6;UBERON:0004854!2.87e-07!6;UBERON:0009034!2.87e-07!6;UBERON:0002095!2.87e-07!6;UBERON:0004782!2.87e-07!6;UBERON:0003281!2.87e-07!6;UBERON:0009664!2.87e-07!6;UBERON:0002296!2.87e-07!6;UBERON:0005602!2.87e-07!6;UBERON:0001179!2.87e-07!6;UBERON:0006293!2.87e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.24e-17,6;UBERON:0004457,1.24e-17,6;UBERON:0000042,1.24e-17,6;UBERON:0004854,1.24e-17,6;UBERON:0009034,1.24e-17,6;UBERON:0002095,1.24e-17,6;UBERON:0004782,1.24e-17,6;UBERON:0003281,1.24e-17,6;UBERON:0009664,1.24e-17,6;UBERON:0002296,1.24e-17,6;UBERON:0005602,1.24e-17,6;UBERON:0001179,1.24e-17,6;UBERON:0006293,1.24e-17,6;UBERON:0003887,1.42e-14,10;UBERON:0005172,6.86e-12,49;UBERON:0005173,6.86e-12,49;UBERON:0002417,6.86e-12,49;UBERON:0000916,6.86e-12,49;UBERON:0004923,8.81e-10,24;UBERON:0009569,3.06e-08,66;UBERON:0002107,3.14e-08,22;UBERON:0007499,3.14e-08,22;UBERON:0006925,3.14e-08,22;UBERON:0009497,3.14e-08,22;UBERON:0000015,3.14e-08,22;UBERON:0002423,3.14e-08,22;UBERON:0006235,3.14e-08,22;UBERON:0008835,3.14e-08,22;UBERON:0003894,3.14e-08,22;UBERON:0004161,3.14e-08,22;UBERON:0008836,3.14e-08,22;UBERON:0009854,7.76e-08,23;UBERON:0009856,7.76e-08,23;UBERON:0002365,3.81e-07,25;UBERON:0002330,3.81e-07,25|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.33575854382378,0,0.129123323441576,0.281577444303333,0,0.513653904676515,0.558405112967355,0,0,3.66420737997229,4.85940641735582,3.49780939064073,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,3.17515336729816,3.07532393792285,0,1.1554064790051,0.332469290716985,1.02084678131185,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.681535739998656,0,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0.34255163915718,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0.485300549842228,1.76673214768315,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,1.16791574001266,3.14494392181125,2.69834534861824,3.44862206360455,2.41177159752417,2.29163266603278,0.863088412352432,1.13494658742525,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,3.2465467351592,0.82554747185289,2.22233432843654,4.52084296811258,2.87057878214153,5.94823250336959,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0.448569283047378,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.0640251524048693,0.402048282689293,0,0.463537303779422,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0|short_description=p5@Ifrd2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15983 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D8U0 | |||
|association_with_transcript=-37bp_to_ENSMUST00000010192,NM_025903,uc009rmd.1_5end | |||
|cluster_id=chr9:107490004..107490011,+ | |||
|description=CAGE_peak_5_at_Ifrd2_5end | |||
|id=chr9:107490004..107490011,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,7.64e-14,3;CL:0002006,7.64e-14,3;CL:0002024,7.64e-14,3;CL:0000050,7.15e-12,9;CL:0000839,3.84e-08,13;CL:0000553,3.89e-07,6;CL:0000556,3.89e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!2.87e-07!6;UBERON:0004457!2.87e-07!6;UBERON:0000042!2.87e-07!6;UBERON:0004854!2.87e-07!6;UBERON:0009034!2.87e-07!6;UBERON:0002095!2.87e-07!6;UBERON:0004782!2.87e-07!6;UBERON:0003281!2.87e-07!6;UBERON:0009664!2.87e-07!6;UBERON:0002296!2.87e-07!6;UBERON:0005602!2.87e-07!6;UBERON:0001179!2.87e-07!6;UBERON:0006293!2.87e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.24e-17,6;UBERON:0004457,1.24e-17,6;UBERON:0000042,1.24e-17,6;UBERON:0004854,1.24e-17,6;UBERON:0009034,1.24e-17,6;UBERON:0002095,1.24e-17,6;UBERON:0004782,1.24e-17,6;UBERON:0003281,1.24e-17,6;UBERON:0009664,1.24e-17,6;UBERON:0002296,1.24e-17,6;UBERON:0005602,1.24e-17,6;UBERON:0001179,1.24e-17,6;UBERON:0006293,1.24e-17,6;UBERON:0003887,1.42e-14,10;UBERON:0005172,6.86e-12,49;UBERON:0005173,6.86e-12,49;UBERON:0002417,6.86e-12,49;UBERON:0000916,6.86e-12,49;UBERON:0004923,8.81e-10,24;UBERON:0009569,3.06e-08,66;UBERON:0002107,3.14e-08,22;UBERON:0007499,3.14e-08,22;UBERON:0006925,3.14e-08,22;UBERON:0009497,3.14e-08,22;UBERON:0000015,3.14e-08,22;UBERON:0002423,3.14e-08,22;UBERON:0006235,3.14e-08,22;UBERON:0008835,3.14e-08,22;UBERON:0003894,3.14e-08,22;UBERON:0004161,3.14e-08,22;UBERON:0008836,3.14e-08,22;UBERON:0009854,7.76e-08,23;UBERON:0009856,7.76e-08,23;UBERON:0002365,3.81e-07,25;UBERON:0002330,3.81e-07,25 | |||
|phase1_expression=0,0,0,0.30246421130683,1.00179145989269,0.33575854382378,0,0.129123323441576,0.281577444303333,0,0.513653904676515,0.558405112967355,0,0,3.66420737997229,4.85940641735582,3.49780939064073,0,0.137114433605739,0.42438965179803,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,3.17515336729816,3.07532393792285,0,1.1554064790051,0.332469290716985,1.02084678131185,0.418531630736908,0,0.523523743973798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.681535739998656,0,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0.506719730950197,0,0.34255163915718,0,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0,0,0,0,0,0.485300549842228,1.76673214768315,0.484875253135222,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,1.16791574001266,3.14494392181125,2.69834534861824,3.44862206360455,2.41177159752417,2.29163266603278,0.863088412352432,1.13494658742525,0.549122826376163,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,3.2465467351592,0.82554747185289,2.22233432843654,4.52084296811258,2.87057878214153,5.94823250336959,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0.448569283047378,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.468207537349412,0.0640251524048693,0.402048282689293,0,0.463537303779422,0.38581844092741,0.824171801606613,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0,0.0941093804153306,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p5@Ifrd2 | |||
}} |
Revision as of 12:49, 4 August 2015
Short description: | p5@Ifrd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ifrd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -37bp_to_ENSMUST00000010192, NM_025903, uc009rmd.1_5end |
EntrezGene: | 15983 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 7.64e-14 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.64e-14 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.64e-14 | 3 |
megakaryocyte-erythroid progenitor cell | 7.15e-12 | 9 |
myeloid lineage restricted progenitor cell | 3.84e-08 | 13 |
megakaryocyte progenitor cell | 3.89e-07 | 6 |
megakaryocyte | 3.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.24e-17 | 6 |
cavity lining | 1.24e-17 | 6 |
serous membrane | 1.24e-17 | 6 |
gastrointestinal system mesentery | 1.24e-17 | 6 |
stomach region | 1.24e-17 | 6 |
mesentery | 1.24e-17 | 6 |
gastrointestinal system serosa | 1.24e-17 | 6 |
mesentery of stomach | 1.24e-17 | 6 |
gut mesentery | 1.24e-17 | 6 |
dorsal mesentery | 1.24e-17 | 6 |
dorsal mesogastrium | 1.24e-17 | 6 |
peritoneal cavity | 1.24e-17 | 6 |
spleen primordium | 1.24e-17 | 6 |
intraembryonic coelom | 1.42e-14 | 10 |
abdomen element | 6.86e-12 | 49 |
abdominal segment element | 6.86e-12 | 49 |
abdominal segment of trunk | 6.86e-12 | 49 |
abdomen | 6.86e-12 | 49 |
organ component layer | 8.81e-10 | 24 |
subdivision of trunk | 3.06e-08 | 66 |
liver | 3.14e-08 | 22 |
epithelial sac | 3.14e-08 | 22 |
digestive gland | 3.14e-08 | 22 |
epithelium of foregut-midgut junction | 3.14e-08 | 22 |
anatomical boundary | 3.14e-08 | 22 |
hepatobiliary system | 3.14e-08 | 22 |
foregut-midgut junction | 3.14e-08 | 22 |
hepatic diverticulum | 3.14e-08 | 22 |
liver primordium | 3.14e-08 | 22 |
septum transversum | 3.14e-08 | 22 |
liver bud | 3.14e-08 | 22 |
digestive tract diverticulum | 7.76e-08 | 23 |
sac | 7.76e-08 | 23 |
exocrine gland | 3.81e-07 | 25 |
exocrine system | 3.81e-07 | 25 |