FFCP PHASE1:Mm9::chr19:8788794..8788806,-: Difference between revisions
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{{FFCP|EntrezGene=17254|HGNC=|MCL_coexpression_id=176|UniProt=P10852|association_with_transcript=-407bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end|description=CAGE_peak_6_at_Slc3a2_5end|id=chr19:8788794..8788806,-|ontology_enrichment_celltype=CL:0002453!3.37e-21!8;CL:0000333!9.22e-17!10;CL:0000095!9.22e-17!10;CL:0000243!9.22e-17!10;CL:0000123!9.22e-17!10;CL:0000125!9.22e-17!10;CL:0000030!9.22e-17!10;CL:0000339!9.22e-17!10;CL:0000128!6.97e-15!6;CL:0000126!6.97e-15!6;CL:0000127!6.97e-15!6;CL:0002604!3.14e-08!2;CL:0002605!3.14e-08!2;CL:0000864!4.64e-08!2;CL:0000878!4.64e-08!2;CL:0000129!4.64e-08!2|ontology_enrichment_celltype_v019_2=CL:0002453,1.09e-59,8;CL:0000333,8.65e-48,10;CL:0000095,8.65e-48,10;CL:0000243,8.65e-48,10;CL:0000123,8.65e-48,10;CL:0000125,8.65e-48,10;CL:0000030,8.65e-48,10;CL:0000339,8.65e-48,10;CL:0000128,4.13e-41,6;CL:0000126,4.13e-41,6;CL:0000127,4.13e-41,6;CL:0002605,6.43e-21,2;CL:0002604,6.43e-21,2;CL:0000878,2.00e-20,2;CL:0000129,2.00e-20,2;CL:0000219,2.15e-11,54;CL:0002319,4.41e-11,43;CL:0000221,7.95e-11,44;CL:0000133,7.95e-11,44;CL:0002194,1.01e-10,4;CL:0000766,1.01e-10,4;CL:0000234,1.01e-10,4;CL:0000576,1.01e-10,4;CL:0000235,1.01e-10,4;CL:0000864,1.01e-10,4;CL:0002009,1.01e-10,4;CL:0000040,1.01e-10,4;CL:0000559,1.01e-10,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.74e-22!9;UBERON:0000019!5.74e-22!9;UBERON:0000047!5.74e-22!9;UBERON:0004088!5.74e-22!9;UBERON:0002104!5.74e-22!9;UBERON:0001456!5.74e-22!9;UBERON:0003072!5.74e-22!9;UBERON:0003071!5.74e-22!9;UBERON:0004128!5.74e-22!9;UBERON:0001444!9.27e-18!11;UBERON:0000020!3.52e-16!12;UBERON:0001032!3.52e-16!12;UBERON:0004456!3.52e-16!12;UBERON:0005085!7.64e-15!13;UBERON:0003056!1.08e-13!49;UBERON:0000033!4.00e-13!63;UBERON:0004121!1.90e-11!102;UBERON:0000924!1.90e-11!102;UBERON:0006601!1.90e-11!102;UBERON:0002346!3.11e-11!71;UBERON:0003075!3.11e-11!71;UBERON:0007284!3.11e-11!71;UBERON:0007811!1.23e-08!86;UBERON:0001954!1.01e-07!7;UBERON:0003022!1.01e-07!7;UBERON:0002421!1.01e-07!7;UBERON:0000349!1.01e-07!7;UBERON:0002600!1.01e-07!7;UBERON:0000153!1.35e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.45e-08,73;UBERON:0001016,4.18e-08,75|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.7912450375686,45.0356674605667,43.3578674935652,7.41928034614421,11.5002051491977,0,0,0,0,0,0,0,0,0,1.35537812827653,0,0,0,0,7.49000276296012,12.2949857702897,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0.900310649026746,0.150704817835715,0.544291993210623,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Slc3a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17254 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P10852 | |||
|association_with_transcript=-407bp_to_ENSMUST00000010239,NM_008577,uc012bib.1_5end | |||
|cluster_id=chr19:8788794..8788806,- | |||
|description=CAGE_peak_6_at_Slc3a2_5end | |||
|id=chr19:8788794..8788806,- | |||
|ontology_enrichment_celltype=CL:0002453!3.37e-21!8;CL:0000333!9.22e-17!10;CL:0000095!9.22e-17!10;CL:0000243!9.22e-17!10;CL:0000123!9.22e-17!10;CL:0000125!9.22e-17!10;CL:0000030!9.22e-17!10;CL:0000339!9.22e-17!10;CL:0000128!6.97e-15!6;CL:0000126!6.97e-15!6;CL:0000127!6.97e-15!6;CL:0002604!3.14e-08!2;CL:0002605!3.14e-08!2;CL:0000864!4.64e-08!2;CL:0000878!4.64e-08!2;CL:0000129!4.64e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.09e-59,8;CL:0000333,8.65e-48,10;CL:0000095,8.65e-48,10;CL:0000243,8.65e-48,10;CL:0000123,8.65e-48,10;CL:0000125,8.65e-48,10;CL:0000030,8.65e-48,10;CL:0000339,8.65e-48,10;CL:0000128,4.13e-41,6;CL:0000126,4.13e-41,6;CL:0000127,4.13e-41,6;CL:0002605,6.43e-21,2;CL:0002604,6.43e-21,2;CL:0000878,2.00e-20,2;CL:0000129,2.00e-20,2;CL:0000219,2.15e-11,54;CL:0002319,4.41e-11,43;CL:0000221,7.95e-11,44;CL:0000133,7.95e-11,44;CL:0002194,1.01e-10,4;CL:0000766,1.01e-10,4;CL:0000234,1.01e-10,4;CL:0000576,1.01e-10,4;CL:0000235,1.01e-10,4;CL:0000864,1.01e-10,4;CL:0002009,1.01e-10,4;CL:0000040,1.01e-10,4;CL:0000559,1.01e-10,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.74e-22!9;UBERON:0000019!5.74e-22!9;UBERON:0000047!5.74e-22!9;UBERON:0004088!5.74e-22!9;UBERON:0002104!5.74e-22!9;UBERON:0001456!5.74e-22!9;UBERON:0003072!5.74e-22!9;UBERON:0003071!5.74e-22!9;UBERON:0004128!5.74e-22!9;UBERON:0001444!9.27e-18!11;UBERON:0000020!3.52e-16!12;UBERON:0001032!3.52e-16!12;UBERON:0004456!3.52e-16!12;UBERON:0005085!7.64e-15!13;UBERON:0003056!1.08e-13!49;UBERON:0000033!4.00e-13!63;UBERON:0004121!1.90e-11!102;UBERON:0000924!1.90e-11!102;UBERON:0006601!1.90e-11!102;UBERON:0002346!3.11e-11!71;UBERON:0003075!3.11e-11!71;UBERON:0007284!3.11e-11!71;UBERON:0007811!1.23e-08!86;UBERON:0001954!1.01e-07!7;UBERON:0003022!1.01e-07!7;UBERON:0002421!1.01e-07!7;UBERON:0000349!1.01e-07!7;UBERON:0002600!1.01e-07!7;UBERON:0000153!1.35e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.45e-08,73;UBERON:0001016,4.18e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.7912450375686,45.0356674605667,43.3578674935652,7.41928034614421,11.5002051491977,0,0,0,0,0,0,0,0,0,1.35537812827653,0,0,0,0,7.49000276296012,12.2949857702897,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260240885925407,0.229902104433473,0.900310649026746,0.150704817835715,0.544291993210623,0.384341160854549,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,1.2178597964584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Slc3a2 | |||
}} |
Revision as of 13:44, 4 August 2015
Short description: | p6@Slc3a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc3a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | -407bp_to_ENSMUST00000010239, NM_008577, uc012bib.1_5end |
EntrezGene: | 17254 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.09e-59 | 8 |
migratory neural crest cell | 8.65e-48 | 10 |
neuron associated cell | 8.65e-48 | 10 |
glial cell (sensu Vertebrata) | 8.65e-48 | 10 |
neuron associated cell (sensu Vertebrata) | 8.65e-48 | 10 |
glial cell | 8.65e-48 | 10 |
glioblast | 8.65e-48 | 10 |
glioblast (sensu Vertebrata) | 8.65e-48 | 10 |
oligodendrocyte | 4.13e-41 | 6 |
macroglial cell | 4.13e-41 | 6 |
astrocyte | 4.13e-41 | 6 |
astrocyte of the cerebral cortex | 6.43e-21 | 2 |
astrocyte of the hippocampus | 6.43e-21 | 2 |
central nervous system macrophage | 2.00e-20 | 2 |
microglial cell | 2.00e-20 | 2 |
motile cell | 2.15e-11 | 54 |
neural cell | 4.41e-11 | 43 |
ectodermal cell | 7.95e-11 | 44 |
neurectodermal cell | 7.95e-11 | 44 |
monopoietic cell | 1.01e-10 | 4 |
myeloid leukocyte | 1.01e-10 | 4 |
phagocyte | 1.01e-10 | 4 |
monocyte | 1.01e-10 | 4 |
macrophage | 1.01e-10 | 4 |
tissue-resident macrophage | 1.01e-10 | 4 |
macrophage dendritic cell progenitor | 1.01e-10 | 4 |
monoblast | 1.01e-10 | 4 |
promonocyte | 1.01e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.45e-08 | 73 |
nervous system | 4.18e-08 | 75 |