Personal tools

FFCP PHASE1:Mm9::chr5:88994007..88994030,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=52822|HGNC=|MCL_coexpression_id=22|UniProt=E9QL96,Q9D394|association_with_transcript=-34bp_to_ENSMUST00000101048,uc008xzw.1,uc008xzx.1_5end|description=CAGE_peak_4_at_Rufy3_5end|id=chr5:88994007..88994030,+|ontology_enrichment_celltype=CL:0000117!3.53e-13!23;CL:0000337!3.53e-13!23;CL:0000540!5.38e-11!33;CL:0000047!5.38e-11!33;CL:0000031!5.38e-11!33;CL:0000404!5.38e-11!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.76e-13,23;CL:0000337,2.76e-13,23;CL:0000540,3.11e-11,33;CL:0000047,3.11e-11,33;CL:0000031,3.11e-11,33;CL:0000404,3.11e-11,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.43e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.28e-07,34|phase1_expression=3.36312578920067,0.697950815278722,2.27499619694768,1.51232105653415,3.50627010962443,1.34303417529512,2.10251376535973,2.1950964985068,1.40788722151667,1.40438715793196,1.54096171402954,1.19658238493005,1.19840510951844,0.34968160967599,0,0.404950534779652,0,2.83915948822414,2.19383093769182,1.69755860719212,1.78590909317247,1.88652807281682,1.30599894569468,1.27993938234725,0.68822784320151,1.14846392823004,0.86152399231815,1.72376986148711,1.33016393619462,0.756090389279792,0.443461021310609,0,0,0,2.02196133825892,1.16364251750945,1.83752420636132,1.25559489221072,0,1.0470474879476,1.17646297606203,0.683045484958446,0,0.503587271902309,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0.777719596297134,0.55994568650145,0,3.18786951509699,2.17608642603403,1.00828139742739,0.514518872071894,0.286533439938757,0,12.1389876515759,10.5798195854407,13.3104594736298,0.338844532069132,0,0.899899717281399,0,1.4209602298922,0.898800331555214,0.768436610643109,9.64313394468842,5.53524347159932,5.46844899513593,5.42736870367227,3.09215957332259,9.43179153955146,9.00947427571422,5.51531271966013,2.20231761998777,3.95830748064082,3.68655679814984,14.5074916503213,16.6507511356386,14.0646610050325,3.35019598801657,4.50210088025344,2.29197371665215,5.00868595305235,7.11858403995515,14.1663578827228,2.04460721999597,2.11600368298999,2.31891590961342,0.860423876981386,0.679971333707751,2.69851595818909,1.94932925234301,1.79210754838934,1.82577746171277,0,0.519572009205738,1.7666978725517,2.11265129665021,0,0,7.11066703153331,0.865964164044856,0.506719730950197,1.51657333504435,1.1418387971906,1.29468941823586,1.1875371125186,2.60227990149204,1.82679286987285,3.45923245884088,1.80867168663147,3.52766121407114,2.26199864393416,3.46072954828123,1.15679485535929,0.884610551949874,1.29413479957927,1.54589062922275,2.42437626567611,1.86391761218122,1.46390398505774,0.628340120440365,0.766371165625774,1.43778149407104,1.79970819298022,1.39777249780371,5.39246301857362,3.20250421973039,10.6806199295935,2.60736480288415,3.06858548796397,3.1168206683934,3.56930778749067,2.54598409625791,1.99051152976149,2.27450482590307,2.10441855886474,1.69156575851515,4.13823787980251,4.68161537493908,3.91832526372859,3.26575195926374,2.562274405697,4.77878795254617,0.776110112217047,0.646703978798527,2.08016688184601,1.05570674498369,1.09597866213787,1.66828349535359,3.1342694986995,1.23469281844766,1.99034266818493,1.40442637462647,1.28673953557358,1.13665399758237,2.07125772535502,0.703578179943289,2.34080679899319,2.13070262026689,2.75469924446365,1.54267112887378,1.62773761325285,3.48755421819505,1.75148013550754,2.79751744852917,1.31333971263276,2.1888578577381,1.60819986167866,1.75640092232841,2.01309628140558,1.89260953707715,9.36431972651488,0.330418782983798,0.793351699990633,2.13288250535234,2.32236671860439,2.31961430379768,1.81515172161008,1.33426826306922,0.760902504450237,3.32170343081158,1.64698954724011,0.754005626400808,1.39269530428806,1.9496408711912,0.898819408654221,1.29682829924817,0.995706366271836,2.84501851429623,1.71372768914593,2.25415471346161,2.44381593414377,3.29719228184964,3.92760591385784,2.97211724484009,1.32849133181642,2.19798218977925,2.71473760627961,0.592905254174298,1.33476084572875,1.37591296579242,1.34917267430912,0.608580364165509,0.72353147925725,1.52775511068852,2.01387296215567,2.59416362840057,1.64736847912849,2.87536413054709,1.86070473834252,1.87222603868736,1.26289438973556,1.97337154874103,1.92977408545347,0.739012760666419,0.947457058852424,1.14075483509418,1.52770577197669,1.17345124144251,1.50755631697634,1.42826184531608,2.34160377429359,2.04925687338048,0.8858587585951,2.55127629851979,1.47476983244164,1.20879487306127,3.32692834737477,3.01582567878545,3.26343410291226,0,1.10374698521893,3.69266356971921,5.39173758324135,1.47541450839008,2.27223834483936,1.57754109708128,0,1.93881057959519,2.38968797952552,2.00518806674155,3.67999490025482,1.61924280669958,2.63030272120181,1.97643888973262,5.46246237917072,2.83880170416537,1.42452482933804,2.93196526836437,0.494910368917606,0,1.21390318077491,1.81394134178851,1.13163047853539,1.77181135728464,1.84461088766356,2.32585463851399,2.18120237686503,1.78248689192361,0.948110273807448,2.10837217149998,3.09406629744561,0,1.8006109403131,1.29358683782755,0.857348140126369,2.30542303734956,1.96205699362278,2.63278432963394,0.913394847343798,1.17335854031855,6.99045833850607,2.20528398054962,3.46261131177108,1.61464426695906,1.44751019827574,1.90995750405018,1.47726809770555,1.1659233465194,7.23158677840988,0.512612642393558,0.82554747185289,0.925972636848558,0.753473828018764,0.956859594047176,1.83022538565218,0.339956859987711,0.839708713941948,2.07299960706636,0.954670618015114,0.790839983952838,2.23651413839534,1.40406943068342,2.09088296014469,1.09181281873089,1.34864346384821,1.32245529160537,1.57053565190418,1.03691978633434,0.621339313086926,1.12738587736838,1.19613236835183,1.65458490457098,2.33341426012857,1.42075805825504,1.85851738039856,2.93393096614385,2.73429208172295,4.29923312145414,3.14059357073808,2.59227005632079,1.26404448251271,1.82452693761148,1.64337531463724,1.55904987573354,3.04345382634718,2.98022032171897,1.9231271923195,1.9199638532695,2.3222283488074,1.82896335972,1.71404514732629,2.14407337627455,2.30908419936791,1.8700304349051,0.906921534460845,0.665957860122194,1.25599399253266,0.839423081820392,3.09103350451505,1.12609485270709,1.83151624267265,1.71494703263253,4.01257683228291,1.12950368523413,0.460325236507177,1.71868654031819,3.09335728218638,3.42541259885321,2.2661816921691,2.02506750069542,1.80128481289688,2.71885445390523,0.51776031175182,2.80225838477277,5.58634822761443,3.41467211508268,1.94485373654635,3.14419743941973,4.59608771125035,3.11145418922261,3.5025959730612,3.85103051510178,2.27427490587418,3.54871019846336,2.45214243801899,2.71560371662659,3.58540853467268,3.4461281373368,4.28664322154766,4.05595140806994,3.8581844092741,4.94503080963968,2.64958056241915,2.40008476669791,2.8396128985494,1.66905332963125,3.92435324907287,3.01150017329058,3.38458431566706,3.47563148458268,2.89376682581627,2.44447404922551,5.05028044491965,4.50813068871862,5.1222330835293,2.86461730218783,3.87342102964915,2.89359916471712,4.24677982494508,2.8071793013449,2.57845264857958,2.48674831689496,1.76473135295612,1.85494268496337|short_description=p4@Rufy3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:52822
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=uniprot:E9QL96,uniprot:Q9D394
|association_with_transcript=-34bp_to_ENSMUST00000101048,uc008xzw.1,uc008xzx.1_5end
|cluster_id=chr5:88994007..88994030,+
|description=CAGE_peak_4_at_Rufy3_5end
|id=chr5:88994007..88994030,+
|ontology_enrichment_celltype=CL:0000117!3.53e-13!23;CL:0000337!3.53e-13!23;CL:0000540!5.38e-11!33;CL:0000047!5.38e-11!33;CL:0000031!5.38e-11!33;CL:0000404!5.38e-11!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.76e-13,23;CL:0000337,2.76e-13,23;CL:0000540,3.11e-11,33;CL:0000047,3.11e-11,33;CL:0000031,3.11e-11,33;CL:0000404,3.11e-11,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.43e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.28e-07,34
|phase1_expression=3.36312578920067,0.697950815278722,2.27499619694768,1.51232105653415,3.50627010962443,1.34303417529512,2.10251376535973,2.1950964985068,1.40788722151667,1.40438715793196,1.54096171402954,1.19658238493005,1.19840510951844,0.34968160967599,0,0.404950534779652,0,2.83915948822414,2.19383093769182,1.69755860719212,1.78590909317247,1.88652807281682,1.30599894569468,1.27993938234725,0.68822784320151,1.14846392823004,0.86152399231815,1.72376986148711,1.33016393619462,0.756090389279792,0.443461021310609,0,0,0,2.02196133825892,1.16364251750945,1.83752420636132,1.25559489221072,0,1.0470474879476,1.17646297606203,0.683045484958446,0,0.503587271902309,0.506884656097573,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0.777719596297134,0.55994568650145,0,3.18786951509699,2.17608642603403,1.00828139742739,0.514518872071894,0.286533439938757,0,12.1389876515759,10.5798195854407,13.3104594736298,0.338844532069132,0,0.899899717281399,0,1.4209602298922,0.898800331555214,0.768436610643109,9.64313394468842,5.53524347159932,5.46844899513593,5.42736870367227,3.09215957332259,9.43179153955146,9.00947427571422,5.51531271966013,2.20231761998777,3.95830748064082,3.68655679814984,14.5074916503213,16.6507511356386,14.0646610050325,3.35019598801657,4.50210088025344,2.29197371665215,5.00868595305235,7.11858403995515,14.1663578827228,2.04460721999597,2.11600368298999,2.31891590961342,0.860423876981386,0.679971333707751,2.69851595818909,1.94932925234301,1.79210754838934,1.82577746171277,0,0.519572009205738,1.7666978725517,2.11265129665021,0,0,7.11066703153331,0.865964164044856,0.506719730950197,1.51657333504435,1.1418387971906,1.29468941823586,1.1875371125186,2.60227990149204,1.82679286987285,3.45923245884088,1.80867168663147,3.52766121407114,2.26199864393416,3.46072954828123,1.15679485535929,0.884610551949874,1.29413479957927,1.54589062922275,2.42437626567611,1.86391761218122,1.46390398505774,0.628340120440365,0.766371165625774,1.43778149407104,1.79970819298022,1.39777249780371,5.39246301857362,3.20250421973039,10.6806199295935,2.60736480288415,3.06858548796397,3.1168206683934,3.56930778749067,2.54598409625791,1.99051152976149,2.27450482590307,2.10441855886474,1.69156575851515,4.13823787980251,4.68161537493908,3.91832526372859,3.26575195926374,2.562274405697,4.77878795254617,0.776110112217047,0.646703978798527,2.08016688184601,1.05570674498369,1.09597866213787,1.66828349535359,3.1342694986995,1.23469281844766,1.99034266818493,1.40442637462647,1.28673953557358,1.13665399758237,2.07125772535502,0.703578179943289,2.34080679899319,2.13070262026689,2.75469924446365,1.54267112887378,1.62773761325285,3.48755421819505,1.75148013550754,2.79751744852917,1.31333971263276,2.1888578577381,1.60819986167866,1.75640092232841,2.01309628140558,1.89260953707715,9.36431972651488,0.330418782983798,0.793351699990633,2.13288250535234,2.32236671860439,2.31961430379768,1.81515172161008,1.33426826306922,0.760902504450237,3.32170343081158,1.64698954724011,0.754005626400808,1.39269530428806,1.9496408711912,0.898819408654221,1.29682829924817,0.995706366271836,2.84501851429623,1.71372768914593,2.25415471346161,2.44381593414377,3.29719228184964,3.92760591385784,2.97211724484009,1.32849133181642,2.19798218977925,2.71473760627961,0.592905254174298,1.33476084572875,1.37591296579242,1.34917267430912,0.608580364165509,0.72353147925725,1.52775511068852,2.01387296215567,2.59416362840057,1.64736847912849,2.87536413054709,1.86070473834252,1.87222603868736,1.26289438973556,1.97337154874103,1.92977408545347,0.739012760666419,0.947457058852424,1.14075483509418,1.52770577197669,1.17345124144251,1.50755631697634,1.42826184531608,2.34160377429359,2.04925687338048,0.8858587585951,2.55127629851979,1.47476983244164,1.20879487306127,3.32692834737477,3.01582567878545,3.26343410291226,0,1.10374698521893,3.69266356971921,5.39173758324135,1.47541450839008,2.27223834483936,1.57754109708128,0,1.93881057959519,2.38968797952552,2.00518806674155,3.67999490025482,1.61924280669958,2.63030272120181,1.97643888973262,5.46246237917072,2.83880170416537,1.42452482933804,2.93196526836437,0.494910368917606,0,1.21390318077491,1.81394134178851,1.13163047853539,1.77181135728464,1.84461088766356,2.32585463851399,2.18120237686503,1.78248689192361,0.948110273807448,2.10837217149998,3.09406629744561,0,1.8006109403131,1.29358683782755,0.857348140126369,2.30542303734956,1.96205699362278,2.63278432963394,0.913394847343798,1.17335854031855,6.99045833850607,2.20528398054962,3.46261131177108,1.61464426695906,1.44751019827574,1.90995750405018,1.47726809770555,1.1659233465194,7.23158677840988,0.512612642393558,0.82554747185289,0.925972636848558,0.753473828018764,0.956859594047176,1.83022538565218,0.339956859987711,0.839708713941948,2.07299960706636,0.954670618015114,0.790839983952838,2.23651413839534,1.40406943068342,2.09088296014469,1.09181281873089,1.34864346384821,1.32245529160537,1.57053565190418,1.03691978633434,0.621339313086926,1.12738587736838,1.19613236835183,1.65458490457098,2.33341426012857,1.42075805825504,1.85851738039856,2.93393096614385,2.73429208172295,4.29923312145414,3.14059357073808,2.59227005632079,1.26404448251271,1.82452693761148,1.64337531463724,1.55904987573354,3.04345382634718,2.98022032171897,1.9231271923195,1.9199638532695,2.3222283488074,1.82896335972,1.71404514732629,2.14407337627455,2.30908419936791,1.8700304349051,0.906921534460845,0.665957860122194,1.25599399253266,0.839423081820392,3.09103350451505,1.12609485270709,1.83151624267265,1.71494703263253,4.01257683228291,1.12950368523413,0.460325236507177,1.71868654031819,3.09335728218638,3.42541259885321,2.2661816921691,2.02506750069542,1.80128481289688,2.71885445390523,0.51776031175182,2.80225838477277,5.58634822761443,3.41467211508268,1.94485373654635,3.14419743941973,4.59608771125035,3.11145418922261,3.5025959730612,3.85103051510178,2.27427490587418,3.54871019846336,2.45214243801899,2.71560371662659,3.58540853467268,3.4461281373368,4.28664322154766,4.05595140806994,3.8581844092741,4.94503080963968,2.64958056241915,2.40008476669791,2.8396128985494,1.66905332963125,3.92435324907287,3.01150017329058,3.38458431566706,3.47563148458268,2.89376682581627,2.44447404922551,5.05028044491965,4.50813068871862,5.1222330835293,2.86461730218783,3.87342102964915,2.89359916471712,4.24677982494508,2.8071793013449,2.57845264857958,2.48674831689496,1.76473135295612,1.85494268496337
|short_description=p4@Rufy3
}}

Revision as of 17:18, 4 August 2015

Short description:p4@Rufy3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rufy3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -34bp_to_ENSMUST00000101048, uc008xzw.1, uc008xzx.1_5end
EntrezGene:52822
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rufy3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.20
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.19
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.64
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.17
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.53
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F110.68
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B22.27
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G84.78
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I22.80
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G19.36
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.32
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G73.93
kidney, neonate N10.CNhs11206.758-6D52.97
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.53
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H23.33
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.93
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C97.23
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I51.42
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D94.30
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.32
thymus, neonate N07.CNhs11211.713-19D31.83
thymus, neonate N10.CNhs11194.748-24E41.71
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I82.80
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H23.41
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.01
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.76e-1323
neuroblast (sensu Vertebrata)2.76e-1323
neuron3.11e-1133
neuronal stem cell3.11e-1133
neuroblast3.11e-1133
electrically signaling cell3.11e-1133

Uber anatomy
Ontology termp-valuen
gray matter3.28e-0734
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:88994007..88994030,%2B&oldid=3802844"