FFCP PHASE1:Mm9::chr14:80421016..80421024,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:80421016..80421024,+|id=chr14:80421016..80421024,+|ontology_enrichment_celltype=CL:0002250!1.41e-11!3;CL:0002563!3.05e-09!9;CL:0002251!3.05e-09!9;CL:0002076!1.86e-07!15|ontology_enrichment_celltype_v019_2=CL:0002250,4.90e-53,3;CL:0002563,2.30e-18,9;CL:0002251,2.30e-18,9;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25|ontology_enrichment_disease=DOID:0060100!1.12e-10!3;DOID:4045!1.12e-10!3|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.60e-20!15;UBERON:0004923!2.46e-17!24;UBERON:0001242!5.62e-15!13;UBERON:0000060!5.62e-15!13;UBERON:0001262!5.62e-15!13;UBERON:0004786!5.62e-15!13;UBERON:0005409!4.37e-14!59;UBERON:0000160!3.21e-12!43;UBERON:0000331!8.00e-10!3;UBERON:0002116!8.00e-10!3;UBERON:0001204!8.00e-10!3;UBERON:0001168!8.00e-10!3;UBERON:0003350!3.05e-09!9;UBERON:0004808!3.05e-09!9;UBERON:0001277!3.05e-09!9;UBERON:0001007!5.03e-08!128;UBERON:0001555!5.03e-08!128;UBERON:0007026!5.03e-08!128;UBERON:0004119!7.81e-08!130;UBERON:0000925!7.81e-08!130;UBERON:0006595!7.81e-08!130;UBERON:0001962!7.96e-08!2;UBERON:0001961!7.96e-08!2;UBERON:0001744!7.96e-08!2;UBERON:0000485!1.67e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.93e-19,15;UBERON:0003350,2.30e-18,9;UBERON:0004808,2.30e-18,9;UBERON:0001277,2.30e-18,9;UBERON:0003199,2.59e-18,1;UBERON:0000485,3.43e-15,11;UBERON:0001242,5.49e-13,13;UBERON:0001262,5.49e-13,13;UBERON:0004786,5.49e-13,13;UBERON:0004923,2.57e-12,24;UBERON:0001962,7.56e-10,2;UBERON:0001961,7.56e-10,2;UBERON:0001744,7.56e-10,2;UBERON:0002465,5.46e-07,3|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.37645568640302,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,3.75507105676657,4.3221007793208,3.67504841272264,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0.38992817423824,0.898819408654221,0.864552199498777,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:80421016..80421024,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:80421016..80421024,+ | |||
|description=CAGE_peak_at_chr14:80421016..80421024,+ | |||
|id=chr14:80421016..80421024,+ | |||
|ontology_enrichment_celltype=CL:0002250!1.41e-11!3;CL:0002563!3.05e-09!9;CL:0002251!3.05e-09!9;CL:0002076!1.86e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.90e-53,3;CL:0002563,2.30e-18,9;CL:0002251,2.30e-18,9;CL:0002076,2.29e-11,15;CL:0000223,1.01e-08,20;CL:0000066,4.03e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!1.12e-10!3;DOID:4045!1.12e-10!3 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.60e-20!15;UBERON:0004923!2.46e-17!24;UBERON:0001242!5.62e-15!13;UBERON:0000060!5.62e-15!13;UBERON:0001262!5.62e-15!13;UBERON:0004786!5.62e-15!13;UBERON:0005409!4.37e-14!59;UBERON:0000160!3.21e-12!43;UBERON:0000331!8.00e-10!3;UBERON:0002116!8.00e-10!3;UBERON:0001204!8.00e-10!3;UBERON:0001168!8.00e-10!3;UBERON:0003350!3.05e-09!9;UBERON:0004808!3.05e-09!9;UBERON:0001277!3.05e-09!9;UBERON:0001007!5.03e-08!128;UBERON:0001555!5.03e-08!128;UBERON:0007026!5.03e-08!128;UBERON:0004119!7.81e-08!130;UBERON:0000925!7.81e-08!130;UBERON:0006595!7.81e-08!130;UBERON:0001962!7.96e-08!2;UBERON:0001961!7.96e-08!2;UBERON:0001744!7.96e-08!2;UBERON:0000485!1.67e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.93e-19,15;UBERON:0003350,2.30e-18,9;UBERON:0004808,2.30e-18,9;UBERON:0001277,2.30e-18,9;UBERON:0003199,2.59e-18,1;UBERON:0000485,3.43e-15,11;UBERON:0001242,5.49e-13,13;UBERON:0001262,5.49e-13,13;UBERON:0004786,5.49e-13,13;UBERON:0004923,2.57e-12,24;UBERON:0001962,7.56e-10,2;UBERON:0001961,7.56e-10,2;UBERON:0001744,7.56e-10,2;UBERON:0002465,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.37645568640302,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,3.75507105676657,4.3221007793208,3.67504841272264,0.418531630736908,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949058123089023,0,0,0,0.38992817423824,0.898819408654221,0.864552199498777,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:80421016..80421024,+ | |||
}} |
Latest revision as of 21:11, 4 August 2015
Short description: | p@chr14:80421016..80421024, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:80421016..80421024, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.90e-53 | 3 |
intestinal epithelial cell | 2.30e-18 | 9 |
epithelial cell of alimentary canal | 2.30e-18 | 9 |
endo-epithelial cell | 2.29e-11 | 15 |
endodermal cell | 1.01e-08 | 20 |
epithelial cell | 4.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.93e-19 | 15 |
epithelium of mucosa | 2.30e-18 | 9 |
gastrointestinal system epithelium | 2.30e-18 | 9 |
intestinal epithelium | 2.30e-18 | 9 |
egg chamber | 2.59e-18 | 1 |
simple columnar epithelium | 3.43e-15 | 11 |
intestinal mucosa | 5.49e-13 | 13 |
wall of intestine | 5.49e-13 | 13 |
gastrointestinal system mucosa | 5.49e-13 | 13 |
organ component layer | 2.57e-12 | 24 |
gut-associated lymphoid tissue | 7.56e-10 | 2 |
mucosa-associated lymphoid tissue | 7.56e-10 | 2 |
lymphoid tissue | 7.56e-10 | 2 |
lymphoid system | 5.46e-07 | 3 |