FFCP PHASE1:Mm9::chr2:4639237..4639251,+: Difference between revisions
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{{FFCP|EntrezGene=209645|HGNC=|MCL_coexpression_id=12|UniProt=Q8BSV3|association_with_transcript=46bp_to_ENSMUST00000056914_5end|description=CAGE_peak_2_at_Bend7_5end|id=chr2:4639237..4639251,+|ontology_enrichment_celltype=CL:0002563!4.02e-07!9;CL:0002251!4.02e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-14,9;CL:0002251,1.35e-14,9;CL:0000239,4.40e-11,6;CL:0000677,4.40e-11,6;CL:0000584,4.40e-11,6;CL:0000066,8.69e-11,25;CL:0000075,2.31e-09,7;CL:0000223,3.10e-08,20;CL:0002076,5.41e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.11e-12!43;UBERON:0000344!2.48e-11!15;UBERON:0005409!4.32e-10!59;UBERON:0001242!4.64e-10!13;UBERON:0000060!4.64e-10!13;UBERON:0001262!4.64e-10!13;UBERON:0004786!4.64e-10!13;UBERON:0003350!4.02e-07!9;UBERON:0004808!4.02e-07!9;UBERON:0001277!4.02e-07!9;UBERON:0000485!6.25e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.91e-41,31;UBERON:0005409,2.80e-26,47;UBERON:0000344,1.84e-24,15;UBERON:0001242,1.80e-21,13;UBERON:0001262,1.80e-21,13;UBERON:0004786,1.80e-21,13;UBERON:0004923,6.94e-16,24;UBERON:0003350,1.35e-14,9;UBERON:0004808,1.35e-14,9;UBERON:0001277,1.35e-14,9;UBERON:0000485,1.38e-11,11;UBERON:0001007,1.87e-11,116;UBERON:0001555,1.87e-11,116;UBERON:0007026,1.87e-11,116;UBERON:0004119,4.18e-11,118;UBERON:0000925,4.18e-11,118;UBERON:0006595,4.18e-11,118;UBERON:0004921,5.74e-10,114;UBERON:0002108,2.26e-08,4|phase1_expression=0.480446541314382,11.5161884520989,6.82498859084304,20.8700305801713,19.0340377379612,1.84667199103079,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,2.07990149631429,3.67054849707472,7.46501553349526,6.8921919385452,7.11055067863434,16.5320374927045,9.8291750606373,3.54768817048488,0,0,0,1.44425809875637,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,1.04182674111352,0.558365998002762,0,0.15279824777681,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0.579728977403356,0,1.3599426674155,0,1.29955283489534,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,2.51204535381932,0,0,0.346970653532272,0,0,0.301445281105245,1.05829836422134,0,3.70792451601561,0,0,0,0,0,1.86391761218122,0.292780797011547,0,10.7291963187608,0.359445373517761,0,0.127070227073065,0.449371918214468,0,0.376963056338593,0.347648640384553,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0.252722758433675,1.26265113531884,0.260240885925407,0.229902104433473,0,0.30140963567143,1.42876648217788,1.2811372028485,0.562210347358373,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,1.28673953557358,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0,0,0.268412837520744,0,0.308713837137853,9.58214470653014,6.87571473325215,0,0,0.128867461322093,1.81515172161008,3.55804870151792,2.66315876557583,7.11793592316767,3.95277491337626,1.50801125280162,5.76973768919337,2.9244613067868,11.6846523125049,6.48414149624083,12.3467589417708,0,0,1.1270773567308,0.407302655690628,0,2.10407459670956,0.505892296994058,1.03327103585722,1.09899109488962,1.85095745882701,0,0,0,0.224862112384854,0,0,0,0,0.972811360650212,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.964887042726734,0.739012760666419,0,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.952174563544055,1.17080188714679,0.157635144106191,0.664394068946325,0,0.655453258862952,0.518054945597687,2.89298117163023,0,0,0,0,0.80275294993896,0.937693492737625,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0.645857706783622,0,0,0,9.32738677215522,0.556275906031529,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.967399816630967,0.954670618015114,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0.674321731924103,0.247960367176008,0.785267825952089,1.29614973291793,0,0,0,0,0.583353565032143,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,1.26348605881899,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.423073039458382,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,1.07435527024149,0,0,0|short_description=p2@Bend7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:209645 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BSV3 | |||
|association_with_transcript=46bp_to_ENSMUST00000056914_5end | |||
|cluster_id=chr2:4639237..4639251,+ | |||
|description=CAGE_peak_2_at_Bend7_5end | |||
|id=chr2:4639237..4639251,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.02e-07!9;CL:0002251!4.02e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.35e-14,9;CL:0002251,1.35e-14,9;CL:0000239,4.40e-11,6;CL:0000677,4.40e-11,6;CL:0000584,4.40e-11,6;CL:0000066,8.69e-11,25;CL:0000075,2.31e-09,7;CL:0000223,3.10e-08,20;CL:0002076,5.41e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.11e-12!43;UBERON:0000344!2.48e-11!15;UBERON:0005409!4.32e-10!59;UBERON:0001242!4.64e-10!13;UBERON:0000060!4.64e-10!13;UBERON:0001262!4.64e-10!13;UBERON:0004786!4.64e-10!13;UBERON:0003350!4.02e-07!9;UBERON:0004808!4.02e-07!9;UBERON:0001277!4.02e-07!9;UBERON:0000485!6.25e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.91e-41,31;UBERON:0005409,2.80e-26,47;UBERON:0000344,1.84e-24,15;UBERON:0001242,1.80e-21,13;UBERON:0001262,1.80e-21,13;UBERON:0004786,1.80e-21,13;UBERON:0004923,6.94e-16,24;UBERON:0003350,1.35e-14,9;UBERON:0004808,1.35e-14,9;UBERON:0001277,1.35e-14,9;UBERON:0000485,1.38e-11,11;UBERON:0001007,1.87e-11,116;UBERON:0001555,1.87e-11,116;UBERON:0007026,1.87e-11,116;UBERON:0004119,4.18e-11,118;UBERON:0000925,4.18e-11,118;UBERON:0006595,4.18e-11,118;UBERON:0004921,5.74e-10,114;UBERON:0002108,2.26e-08,4 | |||
|phase1_expression=0.480446541314382,11.5161884520989,6.82498859084304,20.8700305801713,19.0340377379612,1.84667199103079,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0.0992909512008853,0,2.07990149631429,3.67054849707472,7.46501553349526,6.8921919385452,7.11055067863434,16.5320374927045,9.8291750606373,3.54768817048488,0,0,0,1.44425809875637,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287536413054709,0,0,0.127687338085188,0,0.263772575460388,0.0914876436024097,1.04182674111352,0.558365998002762,0,0.15279824777681,0.294628585473668,0.142371680799103,0.372798891650601,0,0,0.579728977403356,0,1.3599426674155,0,1.29955283489534,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,2.51204535381932,0,0,0.346970653532272,0,0,0.301445281105245,1.05829836422134,0,3.70792451601561,0,0,0,0,0,1.86391761218122,0.292780797011547,0,10.7291963187608,0.359445373517761,0,0.127070227073065,0.449371918214468,0,0.376963056338593,0.347648640384553,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0.252722758433675,1.26265113531884,0.260240885925407,0.229902104433473,0,0.30140963567143,1.42876648217788,1.2811372028485,0.562210347358373,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,1.28673953557358,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0.268273401399619,0.350296027101508,0,0,0.0810688095458557,0,0,0.268412837520744,0,0.308713837137853,9.58214470653014,6.87571473325215,0,0,0.128867461322093,1.81515172161008,3.55804870151792,2.66315876557583,7.11793592316767,3.95277491337626,1.50801125280162,5.76973768919337,2.9244613067868,11.6846523125049,6.48414149624083,12.3467589417708,0,0,1.1270773567308,0.407302655690628,0,2.10407459670956,0.505892296994058,1.03327103585722,1.09899109488962,1.85095745882701,0,0,0,0.224862112384854,0,0,0,0,0.972811360650212,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.964887042726734,0.739012760666419,0,0.162964976442026,0.339490171550376,0.469380496577004,0.335012514883631,0.952174563544055,1.17080188714679,0.157635144106191,0.664394068946325,0,0.655453258862952,0.518054945597687,2.89298117163023,0,0,0,0,0.80275294993896,0.937693492737625,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0,0.532020700926821,0,0.164549020602121,0.304464949114599,0,0.21183207086382,0,0,0.645857706783622,0,0,0,9.32738677215522,0.556275906031529,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.967399816630967,0.954670618015114,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0.674321731924103,0.247960367176008,0.785267825952089,1.29614973291793,0,0,0,0,0.583353565032143,0.258319646955462,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0.501572104035363,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,1.26348605881899,0.25347929989024,0.188626341386076,0.37456602987953,0.256100609619477,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0.476872379894642,0.436039249896986,0.0941093804153306,0.423073039458382,0,0,0.135804113845862,0.561142271657738,0.237270036248348,0,0.409231043169689,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,1.07435527024149,0,0,0 | |||
|short_description=p2@Bend7 | |||
}} |
Revision as of 05:07, 5 August 2015
Short description: | p2@Bend7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bend7_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 46bp_to_ENSMUST00000056914_5end |
EntrezGene: | 209645 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.35e-14 | 9 |
epithelial cell of alimentary canal | 1.35e-14 | 9 |
brush border epithelial cell | 4.40e-11 | 6 |
gut absorptive cell | 4.40e-11 | 6 |
enterocyte | 4.40e-11 | 6 |
epithelial cell | 8.69e-11 | 25 |
columnar/cuboidal epithelial cell | 2.31e-09 | 7 |
endodermal cell | 3.10e-08 | 20 |
endo-epithelial cell | 5.41e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.91e-41 | 31 |
gastrointestinal system | 2.80e-26 | 47 |
mucosa | 1.84e-24 | 15 |
intestinal mucosa | 1.80e-21 | 13 |
wall of intestine | 1.80e-21 | 13 |
gastrointestinal system mucosa | 1.80e-21 | 13 |
organ component layer | 6.94e-16 | 24 |
epithelium of mucosa | 1.35e-14 | 9 |
gastrointestinal system epithelium | 1.35e-14 | 9 |
intestinal epithelium | 1.35e-14 | 9 |
simple columnar epithelium | 1.38e-11 | 11 |
digestive system | 1.87e-11 | 116 |
digestive tract | 1.87e-11 | 116 |
primitive gut | 1.87e-11 | 116 |
endoderm-derived structure | 4.18e-11 | 118 |
endoderm | 4.18e-11 | 118 |
presumptive endoderm | 4.18e-11 | 118 |
subdivision of digestive tract | 5.74e-10 | 114 |
small intestine | 2.26e-08 | 4 |