FFCP PHASE1:Mm9::chr7:52409874..52409884,-: Difference between revisions
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{{FFCP|EntrezGene=69748|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=11bp_to_ENSMUST00000126618_5end|description=CAGE_peak_2_at_Aldh16a1_5end|id=chr7:52409874..52409884,-|ontology_enrichment_celltype=CL:0002076!8.07e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,1.93e-13,6;CL:0000677,1.93e-13,6;CL:0000584,1.93e-13,6;CL:0000066,5.49e-12,25;CL:0000075,2.23e-11,7;CL:0000473,1.03e-10,7;CL:0002076,4.05e-10,15;CL:0000223,7.28e-09,20;CL:0002563,1.25e-08,9;CL:0002251,1.25e-08,9;CL:0000682,1.20e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.73e-09!15;UBERON:0001242!3.04e-08!13;UBERON:0000060!3.04e-08!13;UBERON:0001262!3.04e-08!13;UBERON:0004786!3.04e-08!13;UBERON:0000160!1.59e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.92e-13,15;UBERON:0000160,2.18e-11,31;UBERON:0001242,8.79e-10,13;UBERON:0001262,8.79e-10,13;UBERON:0004786,8.79e-10,13;UBERON:0003350,1.25e-08,9;UBERON:0004808,1.25e-08,9;UBERON:0001277,1.25e-08,9;UBERON:0005409,2.94e-07,47;UBERON:0004923,3.49e-07,24;UBERON:0000485,6.97e-07,11|phase1_expression=0.320297694209588,10.4692622291808,8.18998630901165,6.65421264875026,7.51343594919521,3.52546471014969,4.67225281191051,0.387369970324729,0,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.548457734422955,0,0.340173160604279,0.496454756004426,1.04479915655574,1.75991665072747,5.96464130774642,6.89078356938024,8.61523992318149,7.75696437669201,2.47030445293286,0.756090389279792,2.43903561720835,1.90509202037889,1.23012957516914,0,0.866554859253824,0.997407872150954,0.612508068787107,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.485510353031154,0.125896817975577,0.202753862439029,0.734187008646726,1.56478268869608,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,2.2497492932035,0.988866362566974,1.4209602298922,0.299600110518405,1.53687322128622,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0.287536413054709,0.919218786610021,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,2.6087803983151,0,0,0.539703191637817,0,0,0.842666520790511,1.1930122580464,0.779358013808606,0.35333957451034,0.422530259330042,2.56652954828636,2.54805239706646,0,0.865964164044856,0.253359865475099,1.01104889002957,0.45673551887624,0.258937883647172,0,0.346970653532272,0,0.691846491768175,0,0.587943535678524,0.125666591329675,0,0.578397427679647,0,0,0,0,0,0,0,1.02182822083437,0.958520996047362,1.19980546198682,0.762421362438388,0,0,0,0.173824320192276,0,0,0,0.712875546952214,0.124406970610093,0,0,0.130120442962704,0.919608417733892,0.180062129805349,0.150704817835715,0.0680364991513279,0.640568601424249,0,0.258703370739016,0,0.567318240503458,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0,0.796137067273973,1.40442637462647,0.51469581422943,0.852490498186778,0.207125772535502,0,0.36012412292203,0.710234206755631,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.405344047729279,0,0.219550115291051,0.134206418760372,0,0,0.991256348951394,1.85115396664481,0.639864751605702,0,0.257734922644187,0.80673409849337,0.889512175379481,0.951128130562796,0.949058123089023,0.658795818896044,1.50801125280162,2.58643413653496,1.16978452271472,1.79763881730844,0.864552199498777,0.597423819763102,0.379335801906163,0.228497025219458,2.25415471346161,1.01825663922657,0.581857461502877,0.841629838683823,1.01178459398812,0.442830443938806,0.31399745568275,0.987177311374404,0.889357881261447,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,0,1.11642284300551,0.312037673114561,1.01031551178845,0.717589654087649,1.92977408545347,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.335012514883631,0.476087281772027,0.585400943573396,0.472905432318573,0.664394068946325,0.797273843287435,0.327726629431476,0,0.433947175744535,4.52373851817817,1.63171705145613,0,0.275936746304732,0,0,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,0.668396022247182,0,0.404810701674894,1.46127928955656,1.58115111178609,0,0.567760340833074,0,0.651547837414304,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0.776152102696527,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0.492422699235184,1.1659233465194,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0.457556346413045,0.849892149969277,0.69975726161829,0.552799895217695,0.954670618015114,0.316335993581135,1.21991680276109,0.756037385752609,0.209088296014469,0,0.134864346384821,0.41326727862668,0.26175594198403,0.777689839750757,0,0,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69748 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=11bp_to_ENSMUST00000126618_5end | |||
|cluster_id=chr7:52409874..52409884,- | |||
|description=CAGE_peak_2_at_Aldh16a1_5end | |||
|id=chr7:52409874..52409884,- | |||
|ontology_enrichment_celltype=CL:0002076!8.07e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.93e-13,6;CL:0000677,1.93e-13,6;CL:0000584,1.93e-13,6;CL:0000066,5.49e-12,25;CL:0000075,2.23e-11,7;CL:0000473,1.03e-10,7;CL:0002076,4.05e-10,15;CL:0000223,7.28e-09,20;CL:0002563,1.25e-08,9;CL:0002251,1.25e-08,9;CL:0000682,1.20e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.73e-09!15;UBERON:0001242!3.04e-08!13;UBERON:0000060!3.04e-08!13;UBERON:0001262!3.04e-08!13;UBERON:0004786!3.04e-08!13;UBERON:0000160!1.59e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.92e-13,15;UBERON:0000160,2.18e-11,31;UBERON:0001242,8.79e-10,13;UBERON:0001262,8.79e-10,13;UBERON:0004786,8.79e-10,13;UBERON:0003350,1.25e-08,9;UBERON:0004808,1.25e-08,9;UBERON:0001277,1.25e-08,9;UBERON:0005409,2.94e-07,47;UBERON:0004923,3.49e-07,24;UBERON:0000485,6.97e-07,11 | |||
|phase1_expression=0.320297694209588,10.4692622291808,8.18998630901165,6.65421264875026,7.51343594919521,3.52546471014969,4.67225281191051,0.387369970324729,0,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.548457734422955,0,0.340173160604279,0.496454756004426,1.04479915655574,1.75991665072747,5.96464130774642,6.89078356938024,8.61523992318149,7.75696437669201,2.47030445293286,0.756090389279792,2.43903561720835,1.90509202037889,1.23012957516914,0,0.866554859253824,0.997407872150954,0.612508068787107,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.485510353031154,0.125896817975577,0.202753862439029,0.734187008646726,1.56478268869608,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,2.2497492932035,0.988866362566974,1.4209602298922,0.299600110518405,1.53687322128622,0.207379224616955,0.135005938331691,0,0,0.220868540951614,0,0.287536413054709,0.919218786610021,0,0,0,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0.0755715601067855,2.6087803983151,0,0,0.539703191637817,0,0,0.842666520790511,1.1930122580464,0.779358013808606,0.35333957451034,0.422530259330042,2.56652954828636,2.54805239706646,0,0.865964164044856,0.253359865475099,1.01104889002957,0.45673551887624,0.258937883647172,0,0.346970653532272,0,0.691846491768175,0,0.587943535678524,0.125666591329675,0,0.578397427679647,0,0,0,0,0,0,0,1.02182822083437,0.958520996047362,1.19980546198682,0.762421362438388,0,0,0,0.173824320192276,0,0,0,0.712875546952214,0.124406970610093,0,0,0.130120442962704,0.919608417733892,0.180062129805349,0.150704817835715,0.0680364991513279,0.640568601424249,0,0.258703370739016,0,0.567318240503458,0.175951124163949,0.219195732427575,0.556094498451196,0.696504333044333,0,0.796137067273973,1.40442637462647,0.51469581422943,0.852490498186778,0.207125772535502,0,0.36012412292203,0.710234206755631,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.405344047729279,0,0.219550115291051,0.134206418760372,0,0,0.991256348951394,1.85115396664481,0.639864751605702,0,0.257734922644187,0.80673409849337,0.889512175379481,0.951128130562796,0.949058123089023,0.658795818896044,1.50801125280162,2.58643413653496,1.16978452271472,1.79763881730844,0.864552199498777,0.597423819763102,0.379335801906163,0.228497025219458,2.25415471346161,1.01825663922657,0.581857461502877,0.841629838683823,1.01178459398812,0.442830443938806,0.31399745568275,0.987177311374404,0.889357881261447,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,0,1.11642284300551,0.312037673114561,1.01031551178845,0.717589654087649,1.92977408545347,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.335012514883631,0.476087281772027,0.585400943573396,0.472905432318573,0.664394068946325,0.797273843287435,0.327726629431476,0,0.433947175744535,4.52373851817817,1.63171705145613,0,0.275936746304732,0,0,0,0,0.631016438832513,1.17131623288992,0.430846795465598,0.716906393857656,0.668396022247182,0,0.404810701674894,1.46127928955656,1.58115111178609,0,0.567760340833074,0,0.651547837414304,0,0,0.485561272309963,0.302323556964751,0.377210159511796,0,0.922305443831782,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0.776152102696527,0.214337035031592,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.301564624640779,0.358117032009409,0.492422699235184,1.1659233465194,0,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0.457556346413045,0.849892149969277,0.69975726161829,0.552799895217695,0.954670618015114,0.316335993581135,1.21991680276109,0.756037385752609,0.209088296014469,0,0.134864346384821,0.41326727862668,0.26175594198403,0.777689839750757,0,0,0.149516546043979,0.496375471371293,0.583353565032143,0.516639293910924,0.168956125490778,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.51968329191118,0.358053391334963,0,0.360586348559907,0,0.201932899896295,0.457240839929999,0,0.194915761479505,0,0.584384510907845,0.226730383615211,0,0.0897138566094757,0.503653849092235,0,0.187682475451182,0.73260649706906,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.448176066834085,0.17230640686684,0,0.347652977834566,0,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.953744759789284,0.145346416632329,0.376437521661322,0.507687647350059,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Aldh16a1 | |||
}} |
Revision as of 08:08, 5 August 2015
Short description: | p2@Aldh16a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Aldh16a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 11bp_to_ENSMUST00000126618_5end |
EntrezGene: | 69748 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.93e-13 | 6 |
gut absorptive cell | 1.93e-13 | 6 |
enterocyte | 1.93e-13 | 6 |
epithelial cell | 5.49e-12 | 25 |
columnar/cuboidal epithelial cell | 2.23e-11 | 7 |
defensive cell | 1.03e-10 | 7 |
endo-epithelial cell | 4.05e-10 | 15 |
endodermal cell | 7.28e-09 | 20 |
intestinal epithelial cell | 1.25e-08 | 9 |
epithelial cell of alimentary canal | 1.25e-08 | 9 |
M cell of gut | 1.20e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.92e-13 | 15 |
intestine | 2.18e-11 | 31 |
intestinal mucosa | 8.79e-10 | 13 |
wall of intestine | 8.79e-10 | 13 |
gastrointestinal system mucosa | 8.79e-10 | 13 |
epithelium of mucosa | 1.25e-08 | 9 |
gastrointestinal system epithelium | 1.25e-08 | 9 |
intestinal epithelium | 1.25e-08 | 9 |
gastrointestinal system | 2.94e-07 | 47 |
organ component layer | 3.49e-07 | 24 |
simple columnar epithelium | 6.97e-07 | 11 |