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FFCP PHASE1:Mm9::chr11:119254374..119254397,+: Difference between revisions

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{{FFCP|EntrezGene=672511|HGNC=|MCL_coexpression_id=1279|UniProt=E9Q555|association_with_transcript=-16bp_to_ENSMUST00000131035_5end|description=CAGE_peak_1_at_Rnf213_5end|id=chr11:119254374..119254397,+|ontology_enrichment_celltype=CL:0002031!6.72e-08!25;CL:0002320!1.02e-07!46;CL:0000134!1.02e-07!46;CL:0000988!3.67e-07!32;CL:0002032!3.67e-07!32;CL:0000037!3.67e-07!32;CL:0000566!3.67e-07!32;CL:0000837!3.67e-07!32;CL:0000219!4.91e-07!54|ontology_enrichment_celltype_v019_2=CL:0002031,6.65e-08,25;CL:0002320,1.14e-07,46;CL:0000134,1.14e-07,46;CL:0000988,3.64e-07,32;CL:0002032,3.64e-07,32;CL:0000037,3.64e-07,32;CL:0000837,3.64e-07,32;CL:0000219,4.98e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.13e-13!70;UBERON:0004119!3.67e-13!130;UBERON:0000925!3.67e-13!130;UBERON:0006595!3.67e-13!130;UBERON:0001007!7.61e-13!128;UBERON:0001555!7.61e-13!128;UBERON:0007026!7.61e-13!128;UBERON:0004921!8.57e-13!126;UBERON:0004185!8.57e-13!126;UBERON:0000926!4.21e-10!193;UBERON:0004120!4.21e-10!193;UBERON:0006603!4.21e-10!193;UBERON:0002193!9.27e-10!48;UBERON:0002390!2.43e-09!45;UBERON:0003061!2.43e-09!45;UBERON:0005057!2.40e-08!51;UBERON:0005911!7.17e-08!69;UBERON:0002384!1.02e-07!46;UBERON:0000490!2.19e-07!66;UBERON:0003929!4.19e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.88e-13,118;UBERON:0000925,1.88e-13,118;UBERON:0006595,1.88e-13,118;UBERON:0001007,3.82e-13,116;UBERON:0001555,3.82e-13,116;UBERON:0007026,3.82e-13,116;UBERON:0004921,4.12e-13,114;UBERON:0002193,8.24e-10,48;UBERON:0002405,8.24e-10,48;UBERON:0002390,2.16e-09,45;UBERON:0003061,2.16e-09,45;UBERON:0005911,6.55e-08,69;UBERON:0002384,1.14e-07,46;UBERON:0000490,2.01e-07,66;UBERON:0000160,2.20e-07,31;UBERON:0000926,2.57e-07,120;UBERON:0004120,2.57e-07,120;UBERON:0006603,2.57e-07,120;UBERON:0005409,2.63e-07,47;UBERON:0003929,3.82e-07,55|phase1_expression=1.44133962394315,33.1526637257393,18.654968814971,74.708660192787,55.0985302940982,12.255186849568,14.2503710763271,19.6267451631196,15.3459707145317,7.95819389494778,2.56826952338257,2.55270908785077,54.955434307917,16.9595580692855,58.9604278413723,61.9574318212867,36.3772176626636,34.543107106727,31.2620908621084,22.9170411970936,8.33424243480484,14.5957698265301,19.5899841854202,9.27956052201759,7.34109699414944,10.3361753540704,17.230479846363,17.0222273821852,11.9714754257516,19.6583501212746,13.3038306393183,25.4012269383852,20.9122027778754,15.8481681015439,5.77703239502549,3.49092755252834,6.12508068787107,19.6709866446347,10.9386948233332,20.9409497589519,9.99993529652724,7.5135003345429,7.76816564849846,7.67970589651021,6.18399280439039,4.40512205188036,24.2541316747892,3.70642765846759,1.5378032791413,7.97162586204562,12.5987779462826,0,27.6841299995265,45.6978149467147,76.6293862044818,22.1243114990914,13.4670716771216,46.9261603972473,0,0,0,9.82649143000483,37.3503814366679,15.2982951937838,31.6437236021432,19.8934432184908,7.19040265244171,6.53171119046643,0.725827286159344,0.540023753326763,1.05162480675691,0.571301968807607,1.76694832761291,0.244981598429908,0.670918297127655,0,2.20231761998777,1.0214987046815,1.53606533256243,0.131886287730194,0.0914876436024097,0,0.837548997004143,2.8138130501584,1.22238598221448,1.47314292736834,2.27794689278565,0.559198337475902,19.3859054932951,12.318164297406,106.090402864814,17.2084775396277,5.439770669662,10.7940638327563,18.1937396885347,20.1612099193801,3.5111105032938,0.681721290312231,0.779358013808606,1.06001872353102,2.25349471642689,2.56652954828636,2.54805239706646,0,5.41227602528035,4.56047757855178,6.57181778519218,13.5878816865681,56.1895207514363,13.9535610720935,4.16364784238726,4.26251669636998,3.92046345335299,14.4693734930518,14.5809996848274,9.04799457573663,15.3260879995312,18.074919614989,30.0767587662957,5.3383060482645,10.1587098491781,12.1218813283806,5.59175283654366,0.585561594023094,0.83778682725382,28.1002760729451,12.1013275750979,8.39863823390771,9.27612657633372,1.19832511523858,2.28750301409313,1.25654352112864,1.39059456153821,0.511430914660661,1.24672826735736,0.486723789203273,9.06370338267815,11.9430691785689,9.85618757891331,4.20883711772948,0.390361328888111,0.459804208866946,1.0803727788321,1.80845781402858,2.04109497453984,2.3060469651273,2.71735001223214,3.3631438196072,1.72454394346274,1.51284864134255,3.51902248327898,2.84954452155847,1.66828349535359,3.83077383174383,4.32142486456681,13.733364410476,10.5331978096985,9.77922047035918,4.54661599032948,6.62802472113606,5.15957331958412,4.50155153652537,6.62885259638589,3.34499193970586,3.70241070929708,4.18561100550734,12.3405764643825,5.02090972178829,4.11399624783701,4.26835406605648,5.6748166682099,7.45619935869195,18.0031094538662,6.84452735677896,1.26173969138476,1.13195073617213,22.7988960258821,57.1213223993256,5.54549451391608,6.27039014023184,9.27845721519072,10.4875432804138,16.0112191568307,21.4954957507192,18.0321043386914,19.7638745668813,26.3901969240283,30.6392966943372,24.565474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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:672511
|HGNC=
|MCL_coexpression_id=1279
|TSSclassifier=NA
|UniProt=uniprot:E9Q555
|association_with_transcript=-16bp_to_ENSMUST00000131035_5end
|cluster_id=chr11:119254374..119254397,+
|description=CAGE_peak_1_at_Rnf213_5end
|id=chr11:119254374..119254397,+
|ontology_enrichment_celltype=CL:0002031!6.72e-08!25;CL:0002320!1.02e-07!46;CL:0000134!1.02e-07!46;CL:0000988!3.67e-07!32;CL:0002032!3.67e-07!32;CL:0000037!3.67e-07!32;CL:0000566!3.67e-07!32;CL:0000837!3.67e-07!32;CL:0000219!4.91e-07!54
|ontology_enrichment_celltype_v019_2=CL:0002031,6.65e-08,25;CL:0002320,1.14e-07,46;CL:0000134,1.14e-07,46;CL:0000988,3.64e-07,32;CL:0002032,3.64e-07,32;CL:0000037,3.64e-07,32;CL:0000837,3.64e-07,32;CL:0000219,4.98e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!2.13e-13!70;UBERON:0004119!3.67e-13!130;UBERON:0000925!3.67e-13!130;UBERON:0006595!3.67e-13!130;UBERON:0001007!7.61e-13!128;UBERON:0001555!7.61e-13!128;UBERON:0007026!7.61e-13!128;UBERON:0004921!8.57e-13!126;UBERON:0004185!8.57e-13!126;UBERON:0000926!4.21e-10!193;UBERON:0004120!4.21e-10!193;UBERON:0006603!4.21e-10!193;UBERON:0002193!9.27e-10!48;UBERON:0002390!2.43e-09!45;UBERON:0003061!2.43e-09!45;UBERON:0005057!2.40e-08!51;UBERON:0005911!7.17e-08!69;UBERON:0002384!1.02e-07!46;UBERON:0000490!2.19e-07!66;UBERON:0003929!4.19e-07!55
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.88e-13,118;UBERON:0000925,1.88e-13,118;UBERON:0006595,1.88e-13,118;UBERON:0001007,3.82e-13,116;UBERON:0001555,3.82e-13,116;UBERON:0007026,3.82e-13,116;UBERON:0004921,4.12e-13,114;UBERON:0002193,8.24e-10,48;UBERON:0002405,8.24e-10,48;UBERON:0002390,2.16e-09,45;UBERON:0003061,2.16e-09,45;UBERON:0005911,6.55e-08,69;UBERON:0002384,1.14e-07,46;UBERON:0000490,2.01e-07,66;UBERON:0000160,2.20e-07,31;UBERON:0000926,2.57e-07,120;UBERON:0004120,2.57e-07,120;UBERON:0006603,2.57e-07,120;UBERON:0005409,2.63e-07,47;UBERON:0003929,3.82e-07,55
|phase1_expression=1.44133962394315,33.1526637257393,18.654968814971,74.708660192787,55.0985302940982,12.255186849568,14.2503710763271,19.6267451631196,15.3459707145317,7.95819389494778,2.56826952338257,2.55270908785077,54.955434307917,16.9595580692855,58.9604278413723,61.9574318212867,36.3772176626636,34.543107106727,31.2620908621084,22.9170411970936,8.33424243480484,14.5957698265301,19.5899841854202,9.27956052201759,7.34109699414944,10.3361753540704,17.230479846363,17.0222273821852,11.9714754257516,19.6583501212746,13.3038306393183,25.4012269383852,20.9122027778754,15.8481681015439,5.77703239502549,3.49092755252834,6.12508068787107,19.6709866446347,10.9386948233332,20.9409497589519,9.99993529652724,7.5135003345429,7.76816564849846,7.67970589651021,6.18399280439039,4.40512205188036,24.2541316747892,3.70642765846759,1.5378032791413,7.97162586204562,12.5987779462826,0,27.6841299995265,45.6978149467147,76.6293862044818,22.1243114990914,13.4670716771216,46.9261603972473,0,0,0,9.82649143000483,37.3503814366679,15.2982951937838,31.6437236021432,19.8934432184908,7.19040265244171,6.53171119046643,0.725827286159344,0.540023753326763,1.05162480675691,0.571301968807607,1.76694832761291,0.244981598429908,0.670918297127655,0,2.20231761998777,1.0214987046815,1.53606533256243,0.131886287730194,0.0914876436024097,0,0.837548997004143,2.8138130501584,1.22238598221448,1.47314292736834,2.27794689278565,0.559198337475902,19.3859054932951,12.318164297406,106.090402864814,17.2084775396277,5.439770669662,10.7940638327563,18.1937396885347,20.1612099193801,3.5111105032938,0.681721290312231,0.779358013808606,1.06001872353102,2.25349471642689,2.56652954828636,2.54805239706646,0,5.41227602528035,4.56047757855178,6.57181778519218,13.5878816865681,56.1895207514363,13.9535610720935,4.16364784238726,4.26251669636998,3.92046345335299,14.4693734930518,14.5809996848274,9.04799457573663,15.3260879995312,18.074919614989,30.0767587662957,5.3383060482645,10.1587098491781,12.1218813283806,5.59175283654366,0.585561594023094,0.83778682725382,28.1002760729451,12.1013275750979,8.39863823390771,9.27612657633372,1.19832511523858,2.28750301409313,1.25654352112864,1.39059456153821,0.511430914660661,1.24672826735736,0.486723789203273,9.06370338267815,11.9430691785689,9.85618757891331,4.20883711772948,0.390361328888111,0.459804208866946,1.0803727788321,1.80845781402858,2.04109497453984,2.3060469651273,2.71735001223214,3.3631438196072,1.72454394346274,1.51284864134255,3.51902248327898,2.84954452155847,1.66828349535359,3.83077383174383,4.32142486456681,13.733364410476,10.5331978096985,9.77922047035918,4.54661599032948,6.62802472113606,5.15957331958412,4.50155153652537,6.62885259638589,3.34499193970586,3.70241070929708,4.18561100550734,12.3405764643825,5.02090972178829,4.11399624783701,4.26835406605648,5.6748166682099,7.45619935869195,18.0031094538662,6.84452735677896,1.26173969138476,1.13195073617213,22.7988960258821,57.1213223993256,5.54549451391608,6.27039014023184,9.27845721519072,10.4875432804138,16.0112191568307,21.4954957507192,18.0321043386914,19.7638745668813,26.3901969240283,30.6392966943372,24.5654749770091,50.3338868846364,20.3169766882213,17.3252907731299,1.89667900953082,3.99869794134051,4.50830942692322,5.29493452397817,12.2190066915604,8.13575510727695,5.37510565556187,4.42830443938806,10.2049173096894,2.96153193412321,10.6722945751374,10.0107063429656,9.04171377520734,10.793381394473,10.1430060694251,6.99413763282009,9.16653066413111,40.5651553805643,18.159145398804,11.2570179407113,34.5043695665651,17.8627654880882,13.1055822708115,11.6186283855671,17.9397413521912,7.23665282045051,23.2789019609922,4.35830247072115,6.02970412835496,5.09235257325564,7.74477819352057,7.03526281255626,15.9489239393629,13.6593553500459,9.61574379047765,15.723992965063,9.08892181347676,12.6174752331118,15.5416483679306,11.7165737451024,141.743806902916,233.335538358226,43.2752560256752,26.4899276452543,1.76605648986571,0.234423373184406,4.26230857979356,3.28212205365685,3.15508219416257,1.56175497718655,0.430846795465598,3.10659437338318,2.22798674082394,1.69845918473299,4.45291771842384,4.09158201075837,3.95287777946523,1.92792789853084,11.7810270722863,11.2181330310371,11.4020871547503,20.7862354945395,10.619611067197,8.49732226542435,6.34879469625977,5.65815239267694,6.20133975049623,13.2197113615889,22.4832615056352,7.63420831902762,7.12994756769443,6.32073515871632,6.32511651449993,2.06271086496374,13.6175842301515,1.26042765821917,1.16422815404479,0.857348140126369,3.01478397191865,2.14042581122485,1.64549020602121,7.91608867697958,19.7124234773517,7.41412248023371,4.19003956304428,5.93590510589328,5.8127193610526,3.25689794612042,3.70054266409723,2.62625439592098,25.358832786797,1.8542530201051,30.9276294244113,9.08102219038179,52.5952457729981,28.2552685507037,36.9074414846768,32.4865005953262,16.1479508494163,22.2522809194616,20.1771961754459,8.59203556213602,3.79603192297362,7.9294592179471,5.07625101862466,3.97267762427491,7.64268973111622,5.25970950900801,8.01738520535759,3.92633912976044,5.57344385154709,8.07741107013003,1.69107881605257,14.9516546043979,6.28742263736971,5.83353565032143,8.00790905561933,12.164841035336,16.195298933114,7.68205870579306,10.8005124758482,5.55643477899814,5.47257011889944,26.2289230121388,4.45995473638361,8.52500944468066,22.8660648440919,16.8285093927433,28.4114337337209,22.957330858314,17.5750537337747,24.8377466872443,18.89928805044,19.7619322868207,26.4110856804729,21.2628170025128,22.0897345123165,2.72076460338254,20.422707710414,19.3781930276468,9.40153851638839,8.50034213741638,33.2197981548592,45.604754442549,6.21668299329291,8.02515366456581,1.12950368523413,1.84130094602871,0,0.859265911718438,0,0.755393897389701,2.70009000092722,0.900642406448441,0.906284817968409,1.03552062350364,0.93408612825759,2.39414924040619,3.75613932659095,4.132814190161,2.93458427679175,4.77993121970037,5.11167473943715,6.79915688888351,4.81378814387723,5.55933865880354,7.60437899670719,6.60192194851267,7.49132059759059,7.2988673741551,5.05432126809397,4.76293691283074,6.02598494913249,4.62982129112892,4.94503080963968,8.68473628792944,7.20025430009372,4.61437096014278,7.62995807831427,5.23247099876383,6.7758753899038,5.83840794452568,4.57319932181931,4.73525480588117,9.2346797415186,7.85599180320834,5.45721083371201,3.94017929502254,5.72923460437565,6.19747364743864,3.66522560864169,4.49659040288303,11.462648813825,10.09893954027,5.35607329792761,3.75005412503176,9.7384490960577
|short_description=p1@Rnf213
}}

Revision as of 14:20, 5 August 2015

Short description:p1@Rnf213
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rnf213_5end
Coexpression cluster:MCL_coexpression_mm9:1279
Association with transcript: -16bp_to_ENSMUST00000131035_5end
EntrezGene:672511
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rnf213

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I533.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I374.71
CD326+ enterocyte, pool2.CNhs13197.11849-124I455.10
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E454.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A158.96
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A361.96
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A536.38
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.54
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A431.26
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.92
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.59
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I117.23
GP2+ M cell, pool3.CNhs13240.11847-124I217.02
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C119.66
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I325.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G819.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H320.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B724.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.60
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A227.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I945.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A176.63
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.47
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C546.93
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.83
Mouse Meningeal cells, donor3.CNhs12109.11639-122D137.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E731.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D219.89
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D919.39
Mouse Schwann, donor2.CNhs12573.11746-123F912.32
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3106.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F717.21
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.16
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.59
accessory axillary lymph node, adult.CNhs10475.1063-29H956.19
adrenal gland, adult.CNhs10508.49-24D713.95
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F514.47
adrenal gland, neonate N00.CNhs11191.1311-23C114.58
adrenal gland, neonate N25.CNhs11223.1377-27I39.05
amnion, adult pregnant day17.5.CNhs10488.583-22A815.33
aorta, adult.CNhs10498.46-23H118.07
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H728.10
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.10
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.28
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.94
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.31
eyeball, neonate N02.CNhs11205.1551-44G82.72
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I613.73
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C810.53
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D29.78
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I94.50
heart, embryo E14.CNhs10597.403-26D46.63
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E54.19
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D318.00
heart, neonate N30.CNhs11202.1390-42D26.84
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I322.80
intestine, adult.CNhs10496.178-9A357.12
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D316.01
intestine, embryo E18.CNhs10526.1289-20F721.50
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E919.76
intestine, neonate N06.CNhs11102.688-20B826.39
intestine, neonate N07.CNhs11095.720-20F230.64
intestine, neonate N10.CNhs11098.755-23A524.57
intestine, neonate N20.CNhs11187.827-18D150.33
intestine, neonate N25.CNhs11121.1352-25E320.32
intestine, neonate N30.CNhs11131.1384-42G117.33
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C712.22
kidney, neonate N00.CNhs11214.646-21G78.14
kidney, neonate N10.CNhs11206.758-6D55.38
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F310.20
kidney, neonate N30.CNhs11203.1385-42H12.96
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F810.01
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E110.79
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F56.99
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G440.57
liver, neonate N00.CNhs11117.641-24F418.16
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A834.50
liver, neonate N07.CNhs11103.716-20H217.86
liver, neonate N10.CNhs11115.751-24B913.11
liver, neonate N20.CNhs11220.823-25A311.62
liver, neonate N25.CNhs11198.1368-26H117.94
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B123.28
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F86.03
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I615.95
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E59.62
lung, neonate N07.CNhs11111.715-19A315.72
lung, neonate N10.CNhs11219.750-23E69.09
lung, neonate N20.CNhs11109.822-18A412.62
lung, neonate N25.CNhs11119.1359-25C715.54
lung, neonate N30.CNhs11133.1394-42H211.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1141.74
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1233.34
mammary gland, adult lactating day02.CNhs10480.595-22B643.28
mammary gland, adult pregnant day19.CNhs10476.588-5H226.49
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I711.78
ovary, embryo E18.CNhs11040.505-44H711.22
ovary, neonate N00.CNhs11217.1299-22I411.40
oviduct, adult pregnant day01.CNhs10500.988-6G620.79
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I713.22
pancreas, neonate N00.CNhs11105.645-26G922.48
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B66.32
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I719.71
placenta, adult pregnant day17.CNhs10464.577-18G37.41
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C42.63
small intestine, neonate N16.CNhs11114.790-21I125.36
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G230.93
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F252.60
spleen, neonate N10.CNhs11116.752-24D128.26
spleen, neonate N20.CNhs11112.824-19H136.91
spleen, neonate N25.CNhs11099.1354-25G332.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C922.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D320.18
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D45.08
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F514.95
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G55.83
testis, embryo E17.CNhs11029.486-18I58.01
testis, embryo E18.CNhs11027.503-18G512.16
testis, neonate N00.CNhs11189.1300-22B716.20
testis, neonate N07.CNhs11222.726-26I47.68
testis, neonate N10.CNhs11204.763-44D910.80
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E25.47
thymus, adult.CNhs10471.38-12B526.23
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I28.53
thymus, embryo E16.CNhs11002.456-26C522.87
thymus, embryo E17.CNhs10581.478-18C116.83
thymus, embryo E18.CNhs10595.1273-19G428.41
thymus, neonate N02.CNhs11181.1541-43F822.96
thymus, neonate N03.CNhs11137.2104-43C717.58
thymus, neonate N06.CNhs11197.681-26C424.84
thymus, neonate N07.CNhs11211.713-19D318.90
thymus, neonate N10.CNhs11194.748-24E419.76
thymus, neonate N20.CNhs11186.820-7A226.41
thymus, neonate N25.CNhs11125.1362-25G721.26
thymus, neonate N30.CNhs11132.1393-42G222.09
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F719.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.40
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F533.22
uterus, adult.CNhs10509.92-27E545.60
vagina, adult.CNhs10502.89-27D56.22
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H23.76
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B311.46
whole body, neonate N00.CNhs10525.657-19C210.10
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B49.74





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.88e-13118
endoderm1.88e-13118
presumptive endoderm1.88e-13118
digestive system3.82e-13116
digestive tract3.82e-13116
primitive gut3.82e-13116
subdivision of digestive tract4.12e-13114
hemolymphoid system8.24e-1048
immune system8.24e-1048
hematopoietic system2.16e-0945
blood island2.16e-0945
endo-epithelium6.55e-0869
connective tissue1.14e-0746
unilaminar epithelium2.01e-0766
intestine2.20e-0731
mesoderm2.57e-07120
mesoderm-derived structure2.57e-07120
presumptive mesoderm2.57e-07120
gastrointestinal system2.63e-0747
gut epithelium3.82e-0755
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