FFCP PHASE1:Mm9::chr15:78391431..78391478,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=86|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:78391431..78391478,-|id=chr15:78391431..78391478,-|ontology_enrichment_celltype=CL:0002031!4.83e-20!25;CL:0000988!6.45e-18!32;CL:0002032!6.45e-18!32;CL:0000037!6.45e-18!32;CL:0000566!6.45e-18!32;CL:0000837!6.45e-18!32;CL:0000738!6.24e-14!17;CL:0002087!6.24e-14!17;CL:0002320!1.42e-13!46;CL:0000134!1.42e-13!46;CL:0000838!1.15e-11!12;CL:0000219!1.34e-10!54;CL:0000542!1.38e-10!13;CL:0000051!1.38e-10!13;CL:0000084!1.77e-10!11;CL:0000827!1.77e-10!11;CL:0000063!2.71e-10!66;CL:0000839!1.17e-09!13;CL:0000763!2.57e-09!16;CL:0000049!9.12e-09!19;CL:0000791!3.89e-08!9;CL:0000789!3.89e-08!9;CL:0002420!3.89e-08!9;CL:0002419!3.89e-08!9;CL:0000790!3.89e-08!9;CL:0000553!5.00e-07!6;CL:0000556!5.00e-07!6;CL:0000624!9.83e-07!8|ontology_enrichment_celltype_v019_2=CL:0002476,4.07e-21,2;CL:0002092,5.73e-14,3;CL:0002540,5.73e-14,3;CL:0002194,4.60e-11,4;CL:0000766,4.60e-11,4;CL:0000234,4.60e-11,4;CL:0000576,4.60e-11,4;CL:0000235,4.60e-11,4;CL:0000864,4.60e-11,4;CL:0002009,4.60e-11,4;CL:0000040,4.60e-11,4;CL:0000559,4.60e-11,4;CL:0000625,1.12e-10,1;CL:0002320,2.84e-10,46;CL:0000134,2.84e-10,46;CL:0002031,5.89e-10,25;CL:0000738,1.12e-09,17;CL:0002087,1.12e-09,17;CL:0000219,1.02e-08,54;CL:0000988,8.44e-08,32;CL:0002032,8.44e-08,32;CL:0000037,8.44e-08,32;CL:0000837,8.44e-08,32;CL:0000839,1.77e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,2.73e-07,6|ontology_enrichment_uberon=UBERON:0002193!3.45e-26!48;UBERON:0002390!1.30e-24!45;UBERON:0003061!1.30e-24!45;UBERON:0002405!4.14e-15!70;UBERON:0004177!8.96e-14!29;UBERON:0002384!1.42e-13!46;UBERON:0002371!1.52e-11!16;UBERON:0002370!7.62e-10!23;UBERON:0000974!7.62e-10!23;UBERON:0004807!7.62e-10!23;UBERON:0005058!7.62e-10!23;UBERON:0003351!7.62e-10!23;UBERON:0009113!7.62e-10!23;UBERON:0003295!7.62e-10!23;UBERON:0009722!7.62e-10!23;UBERON:0005562!7.62e-10!23;UBERON:0007690!7.62e-10!23;UBERON:0003081!1.81e-09!88;UBERON:0006562!2.73e-09!24;UBERON:0003408!2.73e-09!24;UBERON:0001557!2.73e-09!24;UBERON:0001042!2.73e-09!24;UBERON:0008814!2.73e-09!24;UBERON:0009145!2.73e-09!24;UBERON:0000072!7.01e-08!27;UBERON:0002204!1.13e-07!32;UBERON:0001474!1.31e-07!22;UBERON:0004765!1.31e-07!22;UBERON:0001434!1.31e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-10,16;UBERON:0002384,2.84e-10,46;UBERON:0002204,7.62e-08,32;UBERON:0001474,1.38e-07,22;UBERON:0004765,1.38e-07,22;UBERON:0001434,1.38e-07,22|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.387369970324729,0.422366166455,0.234064526321993,0,0,0.513602189793617,0.262261207256992,0.999329285446988,0,0.699561878128147,0.315462165358238,0.548457734422955,0.84877930359606,0,0.496454756004426,0.261199789138935,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0,0,1.23012957516914,0,0,0,0,1.25559489221072,0.7813353445238,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,1.97773272513395,1.4209602298922,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,3.01582567878545,15.2293591469239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0.403865799792591,0.381034033274999,0.403304740547362,0.779663045918019,0.288635524920988,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr15:78391431..78391478,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:78391431..78391478,- | |||
|description=CAGE_peak_at_chr15:78391431..78391478,- | |||
|id=chr15:78391431..78391478,- | |||
|ontology_enrichment_celltype=CL:0002031!4.83e-20!25;CL:0000988!6.45e-18!32;CL:0002032!6.45e-18!32;CL:0000037!6.45e-18!32;CL:0000566!6.45e-18!32;CL:0000837!6.45e-18!32;CL:0000738!6.24e-14!17;CL:0002087!6.24e-14!17;CL:0002320!1.42e-13!46;CL:0000134!1.42e-13!46;CL:0000838!1.15e-11!12;CL:0000219!1.34e-10!54;CL:0000542!1.38e-10!13;CL:0000051!1.38e-10!13;CL:0000084!1.77e-10!11;CL:0000827!1.77e-10!11;CL:0000063!2.71e-10!66;CL:0000839!1.17e-09!13;CL:0000763!2.57e-09!16;CL:0000049!9.12e-09!19;CL:0000791!3.89e-08!9;CL:0000789!3.89e-08!9;CL:0002420!3.89e-08!9;CL:0002419!3.89e-08!9;CL:0000790!3.89e-08!9;CL:0000553!5.00e-07!6;CL:0000556!5.00e-07!6;CL:0000624!9.83e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,4.07e-21,2;CL:0002092,5.73e-14,3;CL:0002540,5.73e-14,3;CL:0002194,4.60e-11,4;CL:0000766,4.60e-11,4;CL:0000234,4.60e-11,4;CL:0000576,4.60e-11,4;CL:0000235,4.60e-11,4;CL:0000864,4.60e-11,4;CL:0002009,4.60e-11,4;CL:0000040,4.60e-11,4;CL:0000559,4.60e-11,4;CL:0000625,1.12e-10,1;CL:0002320,2.84e-10,46;CL:0000134,2.84e-10,46;CL:0002031,5.89e-10,25;CL:0000738,1.12e-09,17;CL:0002087,1.12e-09,17;CL:0000219,1.02e-08,54;CL:0000988,8.44e-08,32;CL:0002032,8.44e-08,32;CL:0000037,8.44e-08,32;CL:0000837,8.44e-08,32;CL:0000839,1.77e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.73e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.45e-26!48;UBERON:0002390!1.30e-24!45;UBERON:0003061!1.30e-24!45;UBERON:0002405!4.14e-15!70;UBERON:0004177!8.96e-14!29;UBERON:0002384!1.42e-13!46;UBERON:0002371!1.52e-11!16;UBERON:0002370!7.62e-10!23;UBERON:0000974!7.62e-10!23;UBERON:0004807!7.62e-10!23;UBERON:0005058!7.62e-10!23;UBERON:0003351!7.62e-10!23;UBERON:0009113!7.62e-10!23;UBERON:0003295!7.62e-10!23;UBERON:0009722!7.62e-10!23;UBERON:0005562!7.62e-10!23;UBERON:0007690!7.62e-10!23;UBERON:0003081!1.81e-09!88;UBERON:0006562!2.73e-09!24;UBERON:0003408!2.73e-09!24;UBERON:0001557!2.73e-09!24;UBERON:0001042!2.73e-09!24;UBERON:0008814!2.73e-09!24;UBERON:0009145!2.73e-09!24;UBERON:0000072!7.01e-08!27;UBERON:0002204!1.13e-07!32;UBERON:0001474!1.31e-07!22;UBERON:0004765!1.31e-07!22;UBERON:0001434!1.31e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-10,16;UBERON:0002384,2.84e-10,46;UBERON:0002204,7.62e-08,32;UBERON:0001474,1.38e-07,22;UBERON:0004765,1.38e-07,22;UBERON:0001434,1.38e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.387369970324729,0.422366166455,0.234064526321993,0,0,0.513602189793617,0.262261207256992,0.999329285446988,0,0.699561878128147,0.315462165358238,0.548457734422955,0.84877930359606,0,0.496454756004426,0.261199789138935,0.159992422793407,0,0.57423196411502,0,0.215471232685889,0,0,0,0,1.23012957516914,0,0,0,0,1.25559489221072,0.7813353445238,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,1.97773272513395,1.4209602298922,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,3.01582567878545,15.2293591469239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0,0.295379054349154,0.403865799792591,0.381034033274999,0.403304740547362,0.779663045918019,0.288635524920988,0.701261413089414,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:78391431..78391478,- | |||
}} |
Latest revision as of 14:31, 5 August 2015
Short description: | p@chr15:78391431..78391478, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78391431..78391478, - |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 4.07e-21 | 2 |
bone marrow cell | 5.73e-14 | 3 |
mesenchymal stem cell of the bone marrow | 5.73e-14 | 3 |
monopoietic cell | 4.60e-11 | 4 |
myeloid leukocyte | 4.60e-11 | 4 |
phagocyte | 4.60e-11 | 4 |
monocyte | 4.60e-11 | 4 |
macrophage | 4.60e-11 | 4 |
tissue-resident macrophage | 4.60e-11 | 4 |
macrophage dendritic cell progenitor | 4.60e-11 | 4 |
monoblast | 4.60e-11 | 4 |
promonocyte | 4.60e-11 | 4 |
CD8-positive, alpha-beta T cell | 1.12e-10 | 1 |
connective tissue cell | 2.84e-10 | 46 |
mesenchymal cell | 2.84e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 5.89e-10 | 25 |
leukocyte | 1.12e-09 | 17 |
nongranular leukocyte | 1.12e-09 | 17 |
motile cell | 1.02e-08 | 54 |
hematopoietic cell | 8.44e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.44e-08 | 32 |
hematopoietic stem cell | 8.44e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.44e-08 | 32 |
myeloid lineage restricted progenitor cell | 1.77e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.61e-10 | 16 |
connective tissue | 2.84e-10 | 46 |
musculoskeletal system | 7.62e-08 | 32 |
bone element | 1.38e-07 | 22 |
skeletal element | 1.38e-07 | 22 |
skeletal system | 1.38e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.73e-07 | 6 |