FFCP PHASE1:Mm9::chr9:74885616..74885627,+: Difference between revisions
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{{FFCP|EntrezGene=59046|HGNC=|MCL_coexpression_id=0|UniProt=P56212|association_with_transcript=0bp_to_ENSMUST00000167885_5end|description=CAGE_peak_6_at_Arpp19_5end|id=chr9:74885616..74885627,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,7.72e-14,9;CL:0002251,7.72e-14,9;CL:0000239,4.31e-11,6;CL:0000677,4.31e-11,6;CL:0000584,4.31e-11,6;CL:0000075,1.82e-09,7;CL:0000066,2.91e-09,25;CL:0002076,6.29e-08,15;CL:0000223,1.92e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.12e-07!15;UBERON:0001242!8.10e-07!13;UBERON:0000060!8.10e-07!13;UBERON:0001262!8.10e-07!13;UBERON:0004786!8.10e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.70e-20,15;UBERON:0001242,2.23e-19,13;UBERON:0001262,2.23e-19,13;UBERON:0004786,2.23e-19,13;UBERON:0004923,6.15e-14,24;UBERON:0003350,7.72e-14,9;UBERON:0004808,7.72e-14,9;UBERON:0001277,7.72e-14,9;UBERON:0000485,3.75e-11,11;UBERON:0000160,1.55e-08,31|phase1_expression=0.640595388419176,1.04692622291808,1.36499771816861,2.11724947914781,1.00179145989269,0.839396359559449,1.40167584357315,0,0.84473233291,0.936258105287974,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,2.09868563438444,0.157731082679119,0.137114433605739,0,1.9559956734746,0.198581902401771,0.522399578277871,0.47997726838022,1.14704640533585,0.57423196411502,3.01533397311352,1.72376986148711,0,1.26015064879965,1.55211357458713,0,0,0,0.577703239502549,1.32987716286794,1.22501613757421,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.388859798148567,0,1.43752564364972,0.167782606057736,1.45072428402269,0,0,0,0,0.606949382578793,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.768436610643109,0.311068836925433,0,0.630974884054146,0.571301968807607,0.441737081903227,0.122490799214954,0.287536413054709,0,0,0.893811366596314,0.768032666281217,0.263772575460388,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0.589257170947335,0,0.186399445825301,0.151452386666368,0.226714680320357,0,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.280888840263504,0,0.259786004602869,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.91347103775248,0,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.150722640552623,0,0.628332956648377,0,0.289198713839823,0,0,0,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0,0,0.508280908292259,0.748953197024114,0.457500602818626,0.628271760564322,0.173824320192276,0.767146371990992,0.41557608911912,0.486723789203273,0.509196819251581,0.373220911830279,0.252722758433675,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0,0,0.646703978798527,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0.51469581422943,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,1.98251269790279,0,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.823494773620054,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,1.08069024937347,0.995706366271836,0.379335801906163,0.342745537829186,0,0,0,0.561086559122548,0.316182685621286,0.738050739898011,1.09899109488962,0.740382983530803,0.296452627087149,0,0.393117990226406,0.674586337154561,0.202860121388503,0.241177159752417,0.763877555344259,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.757736633841335,0.358794827043824,1.4473305640901,0.369506380333209,0.189491411770485,0.325929952884052,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0.578596234326046,0,0,1.47529281905711,0.275936746304732,0.481651769963376,0.820481806145422,0,1.00988370881749,0.631016438832513,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0.488660878060728,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.727067458955011,1.06949213515416,0.948110273807448,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,1.06404140185364,0.535106452806212,0.658196082408484,0,1.17335854031855,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.361877549568935,0.358117032009409,0.328281799490123,0,0.927126510052548,0.512612642393558,0.206386867963223,0,0.188368457004691,0.546776910884101,0.686334519619568,0.509935289981566,0.279902904647316,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0,0,0.269728692769641,0.41326727862668,0.523511883968059,0.777689839750757,0,8.45539408026285,0.448549638131936,0.330916980914195,0.194451188344048,0,0.168956125490778,0.117357238645754,0.651021924219751,0.2097186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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:59046 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P56212 | |||
|association_with_transcript=0bp_to_ENSMUST00000167885_5end | |||
|cluster_id=chr9:74885616..74885627,+ | |||
|description=CAGE_peak_6_at_Arpp19_5end | |||
|id=chr9:74885616..74885627,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.72e-14,9;CL:0002251,7.72e-14,9;CL:0000239,4.31e-11,6;CL:0000677,4.31e-11,6;CL:0000584,4.31e-11,6;CL:0000075,1.82e-09,7;CL:0000066,2.91e-09,25;CL:0002076,6.29e-08,15;CL:0000223,1.92e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.12e-07!15;UBERON:0001242!8.10e-07!13;UBERON:0000060!8.10e-07!13;UBERON:0001262!8.10e-07!13;UBERON:0004786!8.10e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.70e-20,15;UBERON:0001242,2.23e-19,13;UBERON:0001262,2.23e-19,13;UBERON:0004786,2.23e-19,13;UBERON:0004923,6.15e-14,24;UBERON:0003350,7.72e-14,9;UBERON:0004808,7.72e-14,9;UBERON:0001277,7.72e-14,9;UBERON:0000485,3.75e-11,11;UBERON:0000160,1.55e-08,31 | |||
|phase1_expression=0.640595388419176,1.04692622291808,1.36499771816861,2.11724947914781,1.00179145989269,0.839396359559449,1.40167584357315,0,0.84473233291,0.936258105287974,0,0,0.171200729931206,0.0874204024189974,0,0.202475267389826,2.09868563438444,0.157731082679119,0.137114433605739,0,1.9559956734746,0.198581902401771,0.522399578277871,0.47997726838022,1.14704640533585,0.57423196411502,3.01533397311352,1.72376986148711,0,1.26015064879965,1.55211357458713,0,0,0,0.577703239502549,1.32987716286794,1.22501613757421,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0,0,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.388859798148567,0,1.43752564364972,0.167782606057736,1.45072428402269,0,0,0,0,0.606949382578793,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0.768436610643109,0.311068836925433,0,0.630974884054146,0.571301968807607,0.441737081903227,0.122490799214954,0.287536413054709,0,0,0.893811366596314,0.768032666281217,0.263772575460388,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0.589257170947335,0,0.186399445825301,0.151452386666368,0.226714680320357,0,0.860423876981386,0,0,0.649776417447669,1.34408066129201,0.280888840263504,0,0.259786004602869,0,0.281686839553361,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,0.91347103775248,0,0.148442139064825,0.520455980298408,0.304465478312141,0.461230994512117,0.150722640552623,0,0.628332956648377,0,0.289198713839823,0,0,0,0.484875253135222,0,0.585561594023094,0.628340120440365,0,0,0,0.508280908292259,0.748953197024114,0.457500602818626,0.628271760564322,0.173824320192276,0.767146371990992,0.41557608911912,0.486723789203273,0.509196819251581,0.373220911830279,0.252722758433675,0.631325567659422,0.260240885925407,0,0.180062129805349,0,0.340182495756639,0.12811372028485,0,0,0.646703978798527,0.189106080167819,0,0,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0.51469581422943,0,0,0.234526059981096,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,1.98251269790279,0,0.426576501070468,0.232236671860439,0.644337306610467,0.605050573870028,0.22237804384487,0.380451252225118,0.474529061544512,0.823494773620054,0.502670417600539,0.198956472041151,0.58489226135736,0.898819408654221,1.08069024937347,0.995706366271836,0.379335801906163,0.342745537829186,0,0,0,0.561086559122548,0.316182685621286,0.738050739898011,1.09899109488962,0.740382983530803,0.296452627087149,0,0.393117990226406,0.674586337154561,0.202860121388503,0.241177159752417,0.763877555344259,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.757736633841335,0.358794827043824,1.4473305640901,0.369506380333209,0.189491411770485,0.325929952884052,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0.578596234326046,0,0,1.47529281905711,0.275936746304732,0.481651769963376,0.820481806145422,0,1.00988370881749,0.631016438832513,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0.488660878060728,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.727067458955011,1.06949213515416,0.948110273807448,0,0,0,0.36012218806262,0.258717367565509,0.428674070063185,1.06404140185364,0.535106452806212,0.658196082408484,0,1.17335854031855,0.21183207086382,0.220528398054962,0.16488625294148,0.322928853391811,0.361877549568935,0.358117032009409,0.328281799490123,0,0.927126510052548,0.512612642393558,0.206386867963223,0,0.188368457004691,0.546776910884101,0.686334519619568,0.509935289981566,0.279902904647316,0,0,0.632671987162271,0.406638934253697,0.324016022465404,0,0,0.269728692769641,0.41326727862668,0.523511883968059,0.777689839750757,0,8.45539408026285,0.448549638131936,0.330916980914195,0.194451188344048,0,0.168956125490778,0.117357238645754,0.651021924219751,0.209718688851422,0.241584120826006,5.18454011264158,0,0.608175645870493,0.410843828659309,0.25984164595559,0.537080087002444,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.304827226619999,0.604957110821043,0.292373642219257,0.192423683280659,0.116876902181569,0.453460767230423,1.55390167361845,0.538283139656854,2.01461539636894,0.386379188064381,0,0,1.07184189539533,0.501572104035363,0,0.920650473014354,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0.900642406448441,0.906284817968409,0.51776031175182,0.31136204275253,0.399024873401031,0.512200817262403,0.243106717068294,0,0.183843508450014,0.222246727801615,0.618105171716683,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.347652977834566,0.192909220463705,0.412085900803307,0,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0.365855945745545,0,0,0,0.237270036248348,0.492522411877817,0.409231043169689,0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| |||
|short_description=p6@Arpp19 | |||
}} |
Revision as of 15:17, 5 August 2015
Short description: | p6@Arpp19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Arpp19_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000167885_5end |
EntrezGene: | 59046 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.72e-14 | 9 |
epithelial cell of alimentary canal | 7.72e-14 | 9 |
brush border epithelial cell | 4.31e-11 | 6 |
gut absorptive cell | 4.31e-11 | 6 |
enterocyte | 4.31e-11 | 6 |
columnar/cuboidal epithelial cell | 1.82e-09 | 7 |
epithelial cell | 2.91e-09 | 25 |
endo-epithelial cell | 6.29e-08 | 15 |
endodermal cell | 1.92e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.70e-20 | 15 |
intestinal mucosa | 2.23e-19 | 13 |
wall of intestine | 2.23e-19 | 13 |
gastrointestinal system mucosa | 2.23e-19 | 13 |
organ component layer | 6.15e-14 | 24 |
epithelium of mucosa | 7.72e-14 | 9 |
gastrointestinal system epithelium | 7.72e-14 | 9 |
intestinal epithelium | 7.72e-14 | 9 |
simple columnar epithelium | 3.75e-11 | 11 |
intestine | 1.55e-08 | 31 |