FFCP PHASE1:Mm9::chr11:23670827..23670846,-: Difference between revisions
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{{FFCP|EntrezGene=19696|HGNC=|MCL_coexpression_id=7|UniProt=A4QPD3|association_with_transcript=123bp_to_ENSMUST00000102864,NM_009044,uc007ifo.1_5end|description=CAGE_peak_3_at_Rel_5end|id=chr11:23670827..23670846,-|ontology_enrichment_celltype=CL:0000988!1.62e-11!32;CL:0002032!1.62e-11!32;CL:0000037!1.62e-11!32;CL:0000566!1.62e-11!32;CL:0000837!1.62e-11!32;CL:0000838!1.10e-09!12;CL:0000791!3.04e-09!9;CL:0000789!3.04e-09!9;CL:0002420!3.04e-09!9;CL:0002419!3.04e-09!9;CL:0000790!3.04e-09!9;CL:0000084!9.41e-09!11;CL:0000827!9.41e-09!11;CL:0000542!1.34e-08!13;CL:0000051!1.34e-08!13;CL:0000624!2.37e-08!8;CL:0002031!5.68e-08!25;CL:0002320!1.26e-07!46;CL:0000134!1.26e-07!46;CL:0000738!8.87e-07!17;CL:0002087!8.87e-07!17|ontology_enrichment_celltype_v019_2=CL:0000988,3.11e-26,32;CL:0002032,3.11e-26,32;CL:0000037,3.11e-26,32;CL:0000837,3.11e-26,32;CL:0000838,3.59e-24,12;CL:0000542,3.35e-22,13;CL:0000051,3.35e-22,13;CL:0000084,7.54e-21,11;CL:0000827,7.54e-21,11;CL:0000791,3.74e-20,9;CL:0000789,3.74e-20,9;CL:0002420,3.74e-20,9;CL:0002419,3.74e-20,9;CL:0000790,3.74e-20,9;CL:0002320,1.01e-19,46;CL:0000134,1.01e-19,46;CL:0002031,2.94e-19,25;CL:0000624,5.87e-17,8;CL:0000738,1.24e-16,17;CL:0002087,1.24e-16,17;CL:0000219,2.55e-16,54;CL:0000034,1.65e-11,97;CL:0000893,7.32e-11,6;CL:0002489,7.32e-11,6;CL:0000898,7.32e-11,6;CL:0000809,7.32e-11,6;CL:0000810,7.32e-11,6;CL:0000895,7.32e-11,6;CL:0000808,7.32e-11,6;CL:0000894,7.32e-11,6;CL:0000806,7.32e-11,6;CL:0000807,7.32e-11,6;CL:0000805,7.32e-11,6;CL:0002425,7.32e-11,6;CL:0002436,7.32e-11,6;CL:0002427,7.32e-11,6;CL:0002428,7.32e-11,6;CL:0002429,7.32e-11,6;CL:0002433,7.32e-11,6;CL:0002431,7.32e-11,6;CL:0002432,7.32e-11,6;CL:0000723,2.32e-08,91;CL:0000048,2.32e-08,91;CL:0000049,3.30e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.05e-16!48;UBERON:0002390!4.76e-14!45;UBERON:0003061!4.76e-14!45;UBERON:0004177!1.25e-12!29;UBERON:0003408!5.30e-11!24;UBERON:0002370!2.44e-10!23;UBERON:0000974!2.44e-10!23;UBERON:0004807!2.44e-10!23;UBERON:0005058!2.44e-10!23;UBERON:0003351!2.44e-10!23;UBERON:0009113!2.44e-10!23;UBERON:0003295!2.44e-10!23;UBERON:0009722!2.44e-10!23;UBERON:0005562!2.44e-10!23;UBERON:0007690!2.44e-10!23;UBERON:0006562!1.29e-09!24;UBERON:0001557!1.29e-09!24;UBERON:0001042!1.29e-09!24;UBERON:0008814!1.29e-09!24;UBERON:0009145!1.29e-09!24;UBERON:0003081!2.79e-09!88;UBERON:0002405!1.40e-08!70;UBERON:0000072!8.54e-08!27;UBERON:0002384!1.26e-07!46;UBERON:0001004!4.03e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.01e-19,46;UBERON:0002193,4.85e-12,48;UBERON:0002405,4.85e-12,48;UBERON:0002390,4.92e-11,45;UBERON:0003061,4.92e-11,45;UBERON:0000077,5.09e-07,35;UBERON:0004177,5.91e-07,29;UBERON:0005057,5.91e-07,29|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,3.22808308603941,179.08325457692,238.511752322111,37.8391709778366,25.4473187195123,0.342401459862411,0.786783621770977,0.333109761815663,0.202475267389826,0,1.57731082679119,2.87940310572051,3.39511721438424,0,1.19149141441062,0,0.639969691173627,0.91763712426868,0,0.86152399231815,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,24.9996083026027,3.62681071005672,4.36921938885203,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,4.66088190564909,0,0,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,5.63131085177825,0.599902730993408,1.52484272487678,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,1.40442637462647,1.02939162845886,0.852490498186778,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,1.02522528478712,0,0.555583582109135,0.188368457004691,1.23024804948923,0.457556346413045,4.41943917984024,6.29781535456461,5.66619892598138,0,0,0,0,0,0,0,0,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.403304740547362,0.779663045918019,0.577271049841977,0.584384510907845,0,0,0,0,0,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p3@Rel}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19696 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A4QPD3 | |||
|association_with_transcript=123bp_to_ENSMUST00000102864,NM_009044,uc007ifo.1_5end | |||
|cluster_id=chr11:23670827..23670846,- | |||
|description=CAGE_peak_3_at_Rel_5end | |||
|id=chr11:23670827..23670846,- | |||
|ontology_enrichment_celltype=CL:0000988!1.62e-11!32;CL:0002032!1.62e-11!32;CL:0000037!1.62e-11!32;CL:0000566!1.62e-11!32;CL:0000837!1.62e-11!32;CL:0000838!1.10e-09!12;CL:0000791!3.04e-09!9;CL:0000789!3.04e-09!9;CL:0002420!3.04e-09!9;CL:0002419!3.04e-09!9;CL:0000790!3.04e-09!9;CL:0000084!9.41e-09!11;CL:0000827!9.41e-09!11;CL:0000542!1.34e-08!13;CL:0000051!1.34e-08!13;CL:0000624!2.37e-08!8;CL:0002031!5.68e-08!25;CL:0002320!1.26e-07!46;CL:0000134!1.26e-07!46;CL:0000738!8.87e-07!17;CL:0002087!8.87e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.11e-26,32;CL:0002032,3.11e-26,32;CL:0000037,3.11e-26,32;CL:0000837,3.11e-26,32;CL:0000838,3.59e-24,12;CL:0000542,3.35e-22,13;CL:0000051,3.35e-22,13;CL:0000084,7.54e-21,11;CL:0000827,7.54e-21,11;CL:0000791,3.74e-20,9;CL:0000789,3.74e-20,9;CL:0002420,3.74e-20,9;CL:0002419,3.74e-20,9;CL:0000790,3.74e-20,9;CL:0002320,1.01e-19,46;CL:0000134,1.01e-19,46;CL:0002031,2.94e-19,25;CL:0000624,5.87e-17,8;CL:0000738,1.24e-16,17;CL:0002087,1.24e-16,17;CL:0000219,2.55e-16,54;CL:0000034,1.65e-11,97;CL:0000893,7.32e-11,6;CL:0002489,7.32e-11,6;CL:0000898,7.32e-11,6;CL:0000809,7.32e-11,6;CL:0000810,7.32e-11,6;CL:0000895,7.32e-11,6;CL:0000808,7.32e-11,6;CL:0000894,7.32e-11,6;CL:0000806,7.32e-11,6;CL:0000807,7.32e-11,6;CL:0000805,7.32e-11,6;CL:0002425,7.32e-11,6;CL:0002436,7.32e-11,6;CL:0002427,7.32e-11,6;CL:0002428,7.32e-11,6;CL:0002429,7.32e-11,6;CL:0002433,7.32e-11,6;CL:0002431,7.32e-11,6;CL:0002432,7.32e-11,6;CL:0000723,2.32e-08,91;CL:0000048,2.32e-08,91;CL:0000049,3.30e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.05e-16!48;UBERON:0002390!4.76e-14!45;UBERON:0003061!4.76e-14!45;UBERON:0004177!1.25e-12!29;UBERON:0003408!5.30e-11!24;UBERON:0002370!2.44e-10!23;UBERON:0000974!2.44e-10!23;UBERON:0004807!2.44e-10!23;UBERON:0005058!2.44e-10!23;UBERON:0003351!2.44e-10!23;UBERON:0009113!2.44e-10!23;UBERON:0003295!2.44e-10!23;UBERON:0009722!2.44e-10!23;UBERON:0005562!2.44e-10!23;UBERON:0007690!2.44e-10!23;UBERON:0006562!1.29e-09!24;UBERON:0001557!1.29e-09!24;UBERON:0001042!1.29e-09!24;UBERON:0008814!1.29e-09!24;UBERON:0009145!1.29e-09!24;UBERON:0003081!2.79e-09!88;UBERON:0002405!1.40e-08!70;UBERON:0000072!8.54e-08!27;UBERON:0002384!1.26e-07!46;UBERON:0001004!4.03e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.01e-19,46;UBERON:0002193,4.85e-12,48;UBERON:0002405,4.85e-12,48;UBERON:0002390,4.92e-11,45;UBERON:0003061,4.92e-11,45;UBERON:0000077,5.09e-07,35;UBERON:0004177,5.91e-07,29;UBERON:0005057,5.91e-07,29 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.16787927191189,0,3.22808308603941,179.08325457692,238.511752322111,37.8391709778366,25.4473187195123,0.342401459862411,0.786783621770977,0.333109761815663,0.202475267389826,0,1.57731082679119,2.87940310572051,3.39511721438424,0,1.19149141441062,0,0.639969691173627,0.91763712426868,0,0.86152399231815,0,0.190023419456374,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,24.9996083026027,3.62681071005672,4.36921938885203,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0.075726193333184,0,1.73918693221007,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,0.11418387971906,4.66088190564909,0,0,0,0,0,0.23517741427141,0.125666591329675,0.247194967734374,0,0,0,0,0,0,0,0,0,5.63131085177825,0.599902730993408,1.52484272487678,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0,1.40442637462647,1.02939162845886,0.852490498186778,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0.54390568381871,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.180938774784468,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,1.02522528478712,0,0.555583582109135,0.188368457004691,1.23024804948923,0.457556346413045,4.41943917984024,6.29781535456461,5.66619892598138,0,0,0,0,0,0,0,0,0,0.388844919875379,0.621339313086926,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0.104859344425711,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.403304740547362,0.779663045918019,0.577271049841977,0.584384510907845,0,0,0,0,0,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p3@Rel | |||
}} |
Revision as of 18:09, 5 August 2015
Short description: | p3@Rel |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rel_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 123bp_to_ENSMUST00000102864, NM_009044, uc007ifo.1_5end |
EntrezGene: | 19696 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.01e-19 | 46 |
hemolymphoid system | 4.85e-12 | 48 |
immune system | 4.85e-12 | 48 |
hematopoietic system | 4.92e-11 | 45 |
blood island | 4.92e-11 | 45 |
mixed endoderm/mesoderm-derived structure | 5.09e-07 | 35 |
hemopoietic organ | 5.91e-07 | 29 |
immune organ | 5.91e-07 | 29 |