FFCP PHASE1:Mm9::chr9:91273452..91273461,+: Difference between revisions
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{{FFCP|EntrezGene=22774|HGNC=|MCL_coexpression_id=141|UniProt=Q61467|association_with_transcript=-18bp_to_ENSMUST00000066384_5end|description=CAGE_peak_13_at_Zic4_5end|id=chr9:91273452..91273461,+|ontology_enrichment_celltype=CL:0002613!1.32e-14!3;CL:0000117!2.94e-14!23;CL:0000337!2.94e-14!23;CL:0000120!5.99e-14!3;CL:0000540!1.57e-09!33;CL:0000047!1.57e-09!33;CL:0000031!1.57e-09!33;CL:0000404!1.57e-09!33;CL:0000393!7.44e-08!39;CL:0000211!7.44e-08!39;CL:0002319!5.35e-07!43;CL:0000221!8.28e-07!44;CL:0000133!8.28e-07!44|ontology_enrichment_celltype_v019_2=CL:0002613,1.33e-65,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000120,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.02e-11!73;UBERON:0005743!8.02e-11!73;UBERON:0000073!1.83e-10!75;UBERON:0001016!1.83e-10!75;UBERON:0000369!6.03e-09!5;UBERON:0002435!6.03e-09!5;UBERON:0000204!6.03e-09!5;UBERON:0010082!6.03e-09!5;UBERON:0002616!6.91e-09!49;UBERON:0000955!1.13e-08!50;UBERON:0006238!1.13e-08!50;UBERON:0004121!3.92e-08!102;UBERON:0000924!3.92e-08!102;UBERON:0006601!3.92e-08!102;UBERON:0000033!8.11e-08!63;UBERON:0001894!6.20e-07!10;UBERON:0006222!6.20e-07!10;UBERON:0001049!9.41e-07!52;UBERON:0005068!9.41e-07!52;UBERON:0006241!9.41e-07!52;UBERON:0007135!9.41e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.27e-40,5;UBERON:0002435,7.27e-40,5;UBERON:0000204,7.27e-40,5;UBERON:0010082,7.27e-40,5;UBERON:0002420,2.39e-25,8;UBERON:0007245,2.39e-25,8;UBERON:0010009,2.39e-25,8;UBERON:0010011,2.39e-25,8;UBERON:0000454,2.39e-25,8;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.46081959976873,1.31886287730194,2.47016637726506,1.56274011167028,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0.62336413367868,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p13@Zic4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22774 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61467 | |||
|association_with_transcript=-18bp_to_ENSMUST00000066384_5end | |||
|cluster_id=chr9:91273452..91273461,+ | |||
|description=CAGE_peak_13_at_Zic4_5end | |||
|id=chr9:91273452..91273461,+ | |||
|ontology_enrichment_celltype=CL:0002613!1.32e-14!3;CL:0000117!2.94e-14!23;CL:0000337!2.94e-14!23;CL:0000120!5.99e-14!3;CL:0000540!1.57e-09!33;CL:0000047!1.57e-09!33;CL:0000031!1.57e-09!33;CL:0000404!1.57e-09!33;CL:0000393!7.44e-08!39;CL:0000211!7.44e-08!39;CL:0002319!5.35e-07!43;CL:0000221!8.28e-07!44;CL:0000133!8.28e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.33e-65,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0000120,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.02e-11!73;UBERON:0005743!8.02e-11!73;UBERON:0000073!1.83e-10!75;UBERON:0001016!1.83e-10!75;UBERON:0000369!6.03e-09!5;UBERON:0002435!6.03e-09!5;UBERON:0000204!6.03e-09!5;UBERON:0010082!6.03e-09!5;UBERON:0002616!6.91e-09!49;UBERON:0000955!1.13e-08!50;UBERON:0006238!1.13e-08!50;UBERON:0004121!3.92e-08!102;UBERON:0000924!3.92e-08!102;UBERON:0006601!3.92e-08!102;UBERON:0000033!8.11e-08!63;UBERON:0001894!6.20e-07!10;UBERON:0006222!6.20e-07!10;UBERON:0001049!9.41e-07!52;UBERON:0005068!9.41e-07!52;UBERON:0006241!9.41e-07!52;UBERON:0007135!9.41e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.27e-40,5;UBERON:0002435,7.27e-40,5;UBERON:0000204,7.27e-40,5;UBERON:0010082,7.27e-40,5;UBERON:0002420,2.39e-25,8;UBERON:0007245,2.39e-25,8;UBERON:0010009,2.39e-25,8;UBERON:0010011,2.39e-25,8;UBERON:0000454,2.39e-25,8;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.46081959976873,1.31886287730194,2.47016637726506,1.56274011167028,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0.62336413367868,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@Zic4 | |||
}} |
Revision as of 18:43, 5 August 2015
Short description: | p13@Zic4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Zic4_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -18bp_to_ENSMUST00000066384_5end |
EntrezGene: | 22774 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.33e-65 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
granule cell | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.27e-40 | 5 |
striatum | 7.27e-40 | 5 |
ventral part of telencephalon | 7.27e-40 | 5 |
future corpus striatum | 7.27e-40 | 5 |
basal ganglion | 2.39e-25 | 8 |
nuclear complex of neuraxis | 2.39e-25 | 8 |
aggregate regional part of brain | 2.39e-25 | 8 |
collection of basal ganglia | 2.39e-25 | 8 |
cerebral subcortex | 2.39e-25 | 8 |
brain grey matter | 1.15e-07 | 29 |
regional part of telencephalon | 1.15e-07 | 29 |
telencephalon | 1.15e-07 | 29 |