FFCP PHASE1:Mm9::chr3:115417851..115417865,-: Difference between revisions
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{{FFCP|EntrezGene=13609|HGNC=|MCL_coexpression_id=1787|UniProt=O08530|association_with_transcript=107bp_to_ENSMUST00000055676,NM_007901,uc008rbo.2_5end|description=CAGE_peak_3_at_S1pr1_5end|id=chr3:115417851..115417865,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!7.91e-13!154;UBERON:0000025!1.62e-12!114;UBERON:0004111!8.85e-11!122;UBERON:0000955!1.80e-07!50;UBERON:0006238!1.80e-07!50;UBERON:0001049!2.67e-07!52;UBERON:0005068!2.67e-07!52;UBERON:0006241!2.67e-07!52;UBERON:0007135!2.67e-07!52;UBERON:0002616!4.01e-07!49;UBERON:0002021!6.57e-07!10;UBERON:0000411!6.57e-07!10;UBERON:0001950!6.57e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.75e-12,114;UBERON:0004111,3.42e-10,122;UBERON:0000073,6.02e-08,54;UBERON:0001049,2.85e-07,52;UBERON:0005068,2.85e-07,52;UBERON:0006241,2.85e-07,52;UBERON:0007135,2.85e-07,52;UBERON:0002021,6.07e-07,10;UBERON:0000411,6.07e-07,10;UBERON:0001950,6.07e-07,10|phase1_expression=0.960893082628764,0,0,0,0,0,0,62.4956885457229,5.490760163915,7.72412936862578,1.02730780935303,0.638177271962691,37.6641605848653,69.4992199231029,3.33109761815663,2.63217847606774,0,17.3504190947031,14.671244395814,10.1853516431527,12.4163203620562,0.0992909512008853,0,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,2.9367480345869,2.34717403304412,7.41285531693518,1.97717564461025,1.36100929351998,5.87942970826523,2.87505128729943,11.9125650300993,53.6767985088395,38.9868807005258,0,1.71920063963254,0.515672092277442,1.61853168687678,0,1.90149421051854,3.72728985276045,3.55717918444456,1.7997994345628,1.97773272513395,4.9733608046227,8.98800331555214,11.1423308543251,2.28117147078651,1.4850653216486,0.630974884054146,6.28432165688368,8.1721360152097,2.9397791811589,3.1629005436018,1.83843757322004,11.0115880999389,15.8332299225633,17.3575382579555,1.71452174049252,1.73826522844578,1.04182674111352,18.7052609330925,10.1297269805702,13.2934475565825,6.77645746589436,5.41012387036591,2.79599168737951,0.681535739998656,2.04043212288321,6.66688324013859,5.16254326188832,4.0798280022465,3.2382191498269,1.94932925234301,0.896053774194671,6.03911006566533,5.96506129023202,5.45550609666024,3.88673531961374,2.67602497575693,8.98285341900225,12.7402619853323,7.11066703153331,0.216491041011214,0,0,4.5673551887624,28.7421050848361,2.9688427812965,1.90833859442749,2.13125834818499,5.30415643688935,3.76806601381556,2.70454026412121,1.75933227861546,1.73036477414062,13.8815382643115,1.76922110389975,4.85300549842228,7.95029466457417,2.42437626567611,0,25.7647101370161,22.4107976290397,0.255457055208591,1.7972268675888,1.19980546198682,1.27070227073065,28.1606402081067,39.3450518424019,2.76439574648302,43.9775530086459,24.0372529890511,24.9345653471472,17.5220564113178,2.34230536855727,6.59356944233493,0.505445516867349,2.52530227063769,1.56144531555244,1.14951052216736,1.80062129805349,1.65775299619287,1.29269348387523,1.40925092313335,1.21812241927647,4.13925393182425,1.29340795759705,2.45837904218165,2.11141348996739,2.84954452155847,1.39023624612799,1.74126083261083,3.49829631893504,2.38841120182192,0,0,0.568326998791185,12.6346721246656,10.3191466391682,13.6847166710371,14.4414288706978,12.0026181365916,12.3413690309903,13.2544348507732,15.0233104783787,13.3112490298573,9.37991144506839,7.55170334763838,12.4845966700618,12.5731989185786,6.36695334344047,14.4942932261202,37.4316108444146,2.98423375899925,0.330418782983798,0.528901133327089,1.70630600428187,0.928946687441754,2.06187938115349,1.21010114774006,1.55664630691409,2.66315876557583,1.42358718463353,1.81168850196412,2.01068167040216,0.795825888164603,1.16978452271472,2.69645822596266,0.648414149624083,1.1948476395262,2.0863469104839,1.71372768914593,3.38123207019241,1.22190796707189,1.55161989734101,3.0158402552837,1.13825766823663,1.77132177575523,1.255989822731,1.48076596706161,6.52195779591728,3.00321190288969,2.35870794135844,1.79889689907883,0.811440485554012,0.72353147925725,1.78238096246994,3.45235364940973,0.648540907100142,2.19649130550465,2.87536413054709,4.09355042435354,6.86482880852033,7.07220858251913,4.12614051100398,2.8946611281802,35.8421188923213,1.70542270593436,3.7481944581666,2.37643120085263,3.75504397261603,6.70025029767263,14.9967493758189,25.7576415172294,14.817703545982,18.6030339304971,16.9022054776936,25.5626770956551,16.4050732772601,25.8921814860906,0,1.08781136763742,4.91764273019036,4.13905119457099,25.6880943980467,17.2301179290539,2.45902418065013,10.0988370881749,0,0,0,0,0,0,0,0,0,13.8168166061377,0.99358059645788,2.67098405500883,4.23506094319298,2.3095817216155,1.32745138339963,1.21390318077491,0.604647113929502,0.943025398779491,2.36241514304618,2.45948118355142,3.10113951801865,2.18120237686503,2.85197902707777,2.21225730555071,2.10837217149998,3.09406629744561,1.70219802876894,2.34079422240703,1.94038025674132,1.07168517515796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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13609 | |||
|HGNC= | |||
|MCL_coexpression_id=1787 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O08530 | |||
|association_with_transcript=107bp_to_ENSMUST00000055676,NM_007901,uc008rbo.2_5end | |||
|cluster_id=chr3:115417851..115417865,- | |||
|description=CAGE_peak_3_at_S1pr1_5end | |||
|id=chr3:115417851..115417865,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!7.91e-13!154;UBERON:0000025!1.62e-12!114;UBERON:0004111!8.85e-11!122;UBERON:0000955!1.80e-07!50;UBERON:0006238!1.80e-07!50;UBERON:0001049!2.67e-07!52;UBERON:0005068!2.67e-07!52;UBERON:0006241!2.67e-07!52;UBERON:0007135!2.67e-07!52;UBERON:0002616!4.01e-07!49;UBERON:0002021!6.57e-07!10;UBERON:0000411!6.57e-07!10;UBERON:0001950!6.57e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.75e-12,114;UBERON:0004111,3.42e-10,122;UBERON:0000073,6.02e-08,54;UBERON:0001049,2.85e-07,52;UBERON:0005068,2.85e-07,52;UBERON:0006241,2.85e-07,52;UBERON:0007135,2.85e-07,52;UBERON:0002021,6.07e-07,10;UBERON:0000411,6.07e-07,10;UBERON:0001950,6.07e-07,10 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,62.4956885457229,5.490760163915,7.72412936862578,1.02730780935303,0.638177271962691,37.6641605848653,69.4992199231029,3.33109761815663,2.63217847606774,0,17.3504190947031,14.671244395814,10.1853516431527,12.4163203620562,0.0992909512008853,0,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,1.11514624341466,2.9367480345869,2.34717403304412,7.41285531693518,1.97717564461025,1.36100929351998,5.87942970826523,2.87505128729943,11.9125650300993,53.6767985088395,38.9868807005258,0,1.71920063963254,0.515672092277442,1.61853168687678,0,1.90149421051854,3.72728985276045,3.55717918444456,1.7997994345628,1.97773272513395,4.9733608046227,8.98800331555214,11.1423308543251,2.28117147078651,1.4850653216486,0.630974884054146,6.28432165688368,8.1721360152097,2.9397791811589,3.1629005436018,1.83843757322004,11.0115880999389,15.8332299225633,17.3575382579555,1.71452174049252,1.73826522844578,1.04182674111352,18.7052609330925,10.1297269805702,13.2934475565825,6.77645746589436,5.41012387036591,2.79599168737951,0.681535739998656,2.04043212288321,6.66688324013859,5.16254326188832,4.0798280022465,3.2382191498269,1.94932925234301,0.896053774194671,6.03911006566533,5.96506129023202,5.45550609666024,3.88673531961374,2.67602497575693,8.98285341900225,12.7402619853323,7.11066703153331,0.216491041011214,0,0,4.5673551887624,28.7421050848361,2.9688427812965,1.90833859442749,2.13125834818499,5.30415643688935,3.76806601381556,2.70454026412121,1.75933227861546,1.73036477414062,13.8815382643115,1.76922110389975,4.85300549842228,7.95029466457417,2.42437626567611,0,25.7647101370161,22.4107976290397,0.255457055208591,1.7972268675888,1.19980546198682,1.27070227073065,28.1606402081067,39.3450518424019,2.76439574648302,43.9775530086459,24.0372529890511,24.9345653471472,17.5220564113178,2.34230536855727,6.59356944233493,0.505445516867349,2.52530227063769,1.56144531555244,1.14951052216736,1.80062129805349,1.65775299619287,1.29269348387523,1.40925092313335,1.21812241927647,4.13925393182425,1.29340795759705,2.45837904218165,2.11141348996739,2.84954452155847,1.39023624612799,1.74126083261083,3.49829631893504,2.38841120182192,0,0,0.568326998791185,12.6346721246656,10.3191466391682,13.6847166710371,14.4414288706978,12.0026181365916,12.3413690309903,13.2544348507732,15.0233104783787,13.3112490298573,9.37991144506839,7.55170334763838,12.4845966700618,12.5731989185786,6.36695334344047,14.4942932261202,37.4316108444146,2.98423375899925,0.330418782983798,0.528901133327089,1.70630600428187,0.928946687441754,2.06187938115349,1.21010114774006,1.55664630691409,2.66315876557583,1.42358718463353,1.81168850196412,2.01068167040216,0.795825888164603,1.16978452271472,2.69645822596266,0.648414149624083,1.1948476395262,2.0863469104839,1.71372768914593,3.38123207019241,1.22190796707189,1.55161989734101,3.0158402552837,1.13825766823663,1.77132177575523,1.255989822731,1.48076596706161,6.52195779591728,3.00321190288969,2.35870794135844,1.79889689907883,0.811440485554012,0.72353147925725,1.78238096246994,3.45235364940973,0.648540907100142,2.19649130550465,2.87536413054709,4.09355042435354,6.86482880852033,7.07220858251913,4.12614051100398,2.8946611281802,35.8421188923213,1.70542270593436,3.7481944581666,2.37643120085263,3.75504397261603,6.70025029767263,14.9967493758189,25.7576415172294,14.817703545982,18.6030339304971,16.9022054776936,25.5626770956551,16.4050732772601,25.8921814860906,0,1.08781136763742,4.91764273019036,4.13905119457099,25.6880943980467,17.2301179290539,2.45902418065013,10.0988370881749,0,0,0,0,0,0,0,0,0,13.8168166061377,0.99358059645788,2.67098405500883,4.23506094319298,2.3095817216155,1.32745138339963,1.21390318077491,0.604647113929502,0.943025398779491,2.36241514304618,2.45948118355142,3.10113951801865,2.18120237686503,2.85197902707777,2.21225730555071,2.10837217149998,3.09406629744561,1.70219802876894,2.34079422240703,1.94038025674132,1.07168517515796,2.12808280370728,4.45922044005176,1.64549020602121,4.56697423671899,5.16277757740163,2.75381692122966,0.220528398054962,1.15420377059036,4.35953952078945,2.29189114726992,1.90995750405018,0.164140899745061,0.874442509889552,19.284231409093,9.05615668228619,1.23832120777933,2.77791791054568,3.39063222608444,5.87785179200408,10.5237959675,12.4084253895514,17.3539800881336,14.7873971970733,1.90934123603023,1.73984796469624,2.23651413839534,1.51207477150522,1.25452977608681,1.74690050996942,1.48350781023303,1.65306911450672,2.35580347785627,0.90730481304255,1.86401793926078,0,1.94371509857172,1.82004339502807,5.05573089694524,5.8121920564979,5.06868376472335,3.87278887530988,2.47388331203505,0.629156066554265,0,0.288030006257865,0.948033361884535,3.24360344464263,2.67048488628551,1.16928740680016,1.9692936523423,2.18549490259391,5.4087952283986,5.75989155980851,3.02899349844443,2.43861781295999,2.31900225814733,4.19068887180935,4.52195655709548,4.32444538071805,4.76133805591944,5.10567692760349,7.53596395519596,3.3576923272815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| |||
|short_description=p3@S1pr1 | |||
}} |
Revision as of 21:52, 5 August 2015
Short description: | p3@S1pr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_S1pr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1787 |
Association with transcript: | 107bp_to_ENSMUST00000055676, NM_007901, uc008rbo.2_5end |
EntrezGene: | 13609 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 4.75e-12 | 114 |
anatomical conduit | 3.42e-10 | 122 |
regional part of nervous system | 6.02e-08 | 54 |
neural tube | 2.85e-07 | 52 |
neural rod | 2.85e-07 | 52 |
future spinal cord | 2.85e-07 | 52 |
neural keel | 2.85e-07 | 52 |
occipital lobe | 6.07e-07 | 10 |
visual cortex | 6.07e-07 | 10 |
neocortex | 6.07e-07 | 10 |