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FFCP PHASE1:Mm9::chr3:129539692..129539722,+: Difference between revisions

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{{FFCP|EntrezGene=12630|HGNC=|MCL_coexpression_id=8|UniProt=Q61129|association_with_transcript=35bp_to_NM_007686,uc008rin.1_5end|description=CAGE_peak_1_at_Cfi_5end|id=chr3:129539692..129539722,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.17e-16!22;UBERON:0007499!3.17e-16!22;UBERON:0006925!3.17e-16!22;UBERON:0009497!3.17e-16!22;UBERON:0000015!3.17e-16!22;UBERON:0002423!3.17e-16!22;UBERON:0006235!3.17e-16!22;UBERON:0008835!3.17e-16!22;UBERON:0003894!3.17e-16!22;UBERON:0004161!3.17e-16!22;UBERON:0008836!3.17e-16!22;UBERON:0009854!3.99e-16!23;UBERON:0009856!3.99e-16!23;UBERON:0005172!4.35e-14!49;UBERON:0005173!4.35e-14!49;UBERON:0002417!4.35e-14!49;UBERON:0000916!4.35e-14!49;UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0009569!1.42e-11!66;UBERON:0004119!1.38e-10!130;UBERON:0000925!1.38e-10!130;UBERON:0006595!1.38e-10!130;UBERON:0005177!4.54e-10!85;UBERON:0001007!4.71e-10!128;UBERON:0001555!4.71e-10!128;UBERON:0007026!4.71e-10!128;UBERON:0004921!1.36e-09!126;UBERON:0004185!1.36e-09!126;UBERON:0005409!7.86e-09!59;UBERON:0005256!8.31e-09!47;UBERON:0000466!2.77e-07!79;UBERON:0002100!2.89e-07!98;UBERON:0000160!5.24e-07!43;UBERON:0003914!6.07e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-18,22;UBERON:0007499,3.31e-18,22;UBERON:0006925,3.31e-18,22;UBERON:0009497,3.31e-18,22;UBERON:0000015,3.31e-18,22;UBERON:0002423,3.31e-18,22;UBERON:0006235,3.31e-18,22;UBERON:0008835,3.31e-18,22;UBERON:0003894,3.31e-18,22;UBERON:0004161,3.31e-18,22;UBERON:0008836,3.31e-18,22;UBERON:0009854,4.29e-18,23;UBERON:0009856,4.29e-18,23;UBERON:0005172,2.14e-15,49;UBERON:0005173,2.14e-15,49;UBERON:0002417,2.14e-15,49;UBERON:0000916,2.14e-15,49;UBERON:0002365,1.19e-14,25;UBERON:0002330,1.19e-14,25;UBERON:0005177,4.41e-12,79;UBERON:0009569,8.17e-11,66;UBERON:0004119,2.35e-09,118;UBERON:0000925,2.35e-09,118;UBERON:0006595,2.35e-09,118;UBERON:0005256,5.85e-09,45;UBERON:0001007,8.12e-09,116;UBERON:0001555,8.12e-09,116;UBERON:0007026,8.12e-09,116;UBERON:0005409,1.07e-08,47;UBERON:0003104,2.05e-08,61;UBERON:0009142,2.05e-08,61;UBERON:0004921,2.37e-08,114;UBERON:0002100,2.37e-08,90|phase1_expression=0.320297694209588,2.44282785347553,4.09499315450582,1.51232105653415,2.50447864973174,5.37213670118047,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,13.759348360233,8.02932483735095,2.29692785646008,6.03066794622705,6.03319451520489,2.47030445293286,1.51218077855958,2.88249663851896,0,0,0,4.62162591602039,2.49351968037739,3.67504841272264,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,8.11620568364698,782.12530417608,725.52941306617,814.951819373104,951.272675143388,732.523960404144,194.515521882476,0,0,0,0.563373679106722,0,0,0,0,0,0,315.375875784044,0,4.75014845007439,8.15381035800839,16.1366703505435,32.5167851131042,17.3331036635516,12.4644029563847,4.90099706185734,320.117483216014,0,0,0.161766849947409,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,2.03678727700633,0.373220911830279,1.51633655060205,0,0,0,0,12.3577950625286,0,0,0.0937017245597288,0,0,1.32374256117473,0,0,0,0.348252166522167,0,0.995171334092466,0,0,0,1.44988040774851,3.98694301967864,0.180062061461015,0.710234206755631,1.18058539048442,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0.402619256281115,0,0.102904612379284,1.65209391491899,4.23120906661671,3.62590025909898,12.7730169523241,17.0105048945163,30.4542122181247,34.24621875211,53.8338521898542,6.64340686162316,44.798115684931,27.1442025504291,27.4559931416788,22.0309418444606,4.49409704327111,1.51296634912286,1.59313018603494,1.51734320762465,6.740662243974,5.63538678365402,11.6081256871829,19.0073437424273,19.4977579295086,8.72664212314751,2.21415221969403,2.82597710114475,3.08492909804501,1055.37135243025,64.0685205949801,90.2205787569602,128.171404059367,197.382898111013,324.865634186505,475.386465275911,481.027941817755,416.201127131516,729.784236253921,1061.00936417188,1041.62251252414,1162.34033235174,777.43778632121,646.727675746493,903.616715513587,0.184753190166605,5.11626811780309,10.1038285394056,9.16623463186016,7.51008794523207,2.1775813467436,3.33261097240419,0.585400943573396,0.630540576424764,0,0.956728611944923,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0,0.477937595905104,0.445597348164788,0.283076530788832,2.02405350837447,0,0,0,0.99358059645788,10.3278050127008,1.79175655288934,13.1976098378028,0,12.867373716214,16.6277956330613,47.3398750187304,38.3892460745005,33.5104311258881,27.6518273689997,16.7225515559653,12.1209108650805,1.58018378967908,0,0,0,0,0,0,0,0,0,0,12.2029288193129,21.6068712281097,0,0,0.161464426695906,0,0,0,5.24665505933731,0,0,2.06386867963222,1.11116716421827,0,0,0.228778173206523,0,0,0,70.6456257331184,6.32671987162271,26.0248917922366,49.0344247330978,63.5628419883985,93.0224521558717,100.339073710307,191.012136181251,87.1647286806819,0,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0,0.352071715937262,16.5359568751817,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0.288635524920988,0,0,0,0,0,0.386379188064381,1.12609485270709,27.4727436400898,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,5.1873233542134,16.561159758151,38.4108612967905,17.6075056607505,25.554247674552,49.116526844157,42.6492568484511,47.4960430195887,47.2543785998301,44.358877480792,37.9138946186013,37.8311690178325,38.8632675097557,39.7453445172844,42.3901385241936,38.5894805396369,42.0542100610877,35.0273015682811,45.4844663215288,50.0589108482706,41.529338641285,49.8331636989901,45.4934284059188,45.9253776426813,43.40729384843,41.8905057878649,43.6695720986819,48.2104604152809,61.1645076106935,37.1327606728665,37.1361898555874,45.0154147486658,43.0724418496985,55.1712907406064,0.249810577937946,48.1899113397541,55.2218608904127,0.765153328275374,10.5883881177367,1.39120701372253|short_description=p1@Cfi}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:12630
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:Q61129
|association_with_transcript=35bp_to_NM_007686,uc008rin.1_5end
|cluster_id=chr3:129539692..129539722,+
|description=CAGE_peak_1_at_Cfi_5end
|id=chr3:129539692..129539722,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!3.17e-16!22;UBERON:0007499!3.17e-16!22;UBERON:0006925!3.17e-16!22;UBERON:0009497!3.17e-16!22;UBERON:0000015!3.17e-16!22;UBERON:0002423!3.17e-16!22;UBERON:0006235!3.17e-16!22;UBERON:0008835!3.17e-16!22;UBERON:0003894!3.17e-16!22;UBERON:0004161!3.17e-16!22;UBERON:0008836!3.17e-16!22;UBERON:0009854!3.99e-16!23;UBERON:0009856!3.99e-16!23;UBERON:0005172!4.35e-14!49;UBERON:0005173!4.35e-14!49;UBERON:0002417!4.35e-14!49;UBERON:0000916!4.35e-14!49;UBERON:0002365!1.25e-12!25;UBERON:0002330!1.25e-12!25;UBERON:0009569!1.42e-11!66;UBERON:0004119!1.38e-10!130;UBERON:0000925!1.38e-10!130;UBERON:0006595!1.38e-10!130;UBERON:0005177!4.54e-10!85;UBERON:0001007!4.71e-10!128;UBERON:0001555!4.71e-10!128;UBERON:0007026!4.71e-10!128;UBERON:0004921!1.36e-09!126;UBERON:0004185!1.36e-09!126;UBERON:0005409!7.86e-09!59;UBERON:0005256!8.31e-09!47;UBERON:0000466!2.77e-07!79;UBERON:0002100!2.89e-07!98;UBERON:0000160!5.24e-07!43;UBERON:0003914!6.07e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-18,22;UBERON:0007499,3.31e-18,22;UBERON:0006925,3.31e-18,22;UBERON:0009497,3.31e-18,22;UBERON:0000015,3.31e-18,22;UBERON:0002423,3.31e-18,22;UBERON:0006235,3.31e-18,22;UBERON:0008835,3.31e-18,22;UBERON:0003894,3.31e-18,22;UBERON:0004161,3.31e-18,22;UBERON:0008836,3.31e-18,22;UBERON:0009854,4.29e-18,23;UBERON:0009856,4.29e-18,23;UBERON:0005172,2.14e-15,49;UBERON:0005173,2.14e-15,49;UBERON:0002417,2.14e-15,49;UBERON:0000916,2.14e-15,49;UBERON:0002365,1.19e-14,25;UBERON:0002330,1.19e-14,25;UBERON:0005177,4.41e-12,79;UBERON:0009569,8.17e-11,66;UBERON:0004119,2.35e-09,118;UBERON:0000925,2.35e-09,118;UBERON:0006595,2.35e-09,118;UBERON:0005256,5.85e-09,45;UBERON:0001007,8.12e-09,116;UBERON:0001555,8.12e-09,116;UBERON:0007026,8.12e-09,116;UBERON:0005409,1.07e-08,47;UBERON:0003104,2.05e-08,61;UBERON:0009142,2.05e-08,61;UBERON:0004921,2.37e-08,114;UBERON:0002100,2.37e-08,90
|phase1_expression=0.320297694209588,2.44282785347553,4.09499315450582,1.51232105653415,2.50447864973174,5.37213670118047,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8064285749853,0,0,13.759348360233,8.02932483735095,2.29692785646008,6.03066794622705,6.03319451520489,2.47030445293286,1.51218077855958,2.88249663851896,0,0,0,4.62162591602039,2.49351968037739,3.67504841272264,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0.439372365468944,0.972149495371417,0.139986421625363,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,8.11620568364698,782.12530417608,725.52941306617,814.951819373104,951.272675143388,732.523960404144,194.515521882476,0,0,0,0.563373679106722,0,0,0,0,0,0,315.375875784044,0,4.75014845007439,8.15381035800839,16.1366703505435,32.5167851131042,17.3331036635516,12.4644029563847,4.90099706185734,320.117483216014,0,0,0.161766849947409,0,0,3.72783522436244,0,0,3.57639877292028,0,0,0,0,0,0,0,0,0,0,2.03678727700633,0.373220911830279,1.51633655060205,0,0,0,0,12.3577950625286,0,0,0.0937017245597288,0,0,1.32374256117473,0,0,0,0.348252166522167,0,0.995171334092466,0,0,0,1.44988040774851,3.98694301967864,0.180062061461015,0.710234206755631,1.18058539048442,0.462801338662135,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0.402619256281115,0,0.102904612379284,1.65209391491899,4.23120906661671,3.62590025909898,12.7730169523241,17.0105048945163,30.4542122181247,34.24621875211,53.8338521898542,6.64340686162316,44.798115684931,27.1442025504291,27.4559931416788,22.0309418444606,4.49409704327111,1.51296634912286,1.59313018603494,1.51734320762465,6.740662243974,5.63538678365402,11.6081256871829,19.0073437424273,19.4977579295086,8.72664212314751,2.21415221969403,2.82597710114475,3.08492909804501,1055.37135243025,64.0685205949801,90.2205787569602,128.171404059367,197.382898111013,324.865634186505,475.386465275911,481.027941817755,416.201127131516,729.784236253921,1061.00936417188,1041.62251252414,1162.34033235174,777.43778632121,646.727675746493,903.616715513587,0.184753190166605,5.11626811780309,10.1038285394056,9.16623463186016,7.51008794523207,2.1775813467436,3.33261097240419,0.585400943573396,0.630540576424764,0,0.956728611944923,0.491589944147214,0.172684981865896,0,0,0,0,0,0,0,0,0,0.631016438832513,0,0,0.477937595905104,0.445597348164788,0.283076530788832,2.02405350837447,0,0,0,0.99358059645788,10.3278050127008,1.79175655288934,13.1976098378028,0,12.867373716214,16.6277956330613,47.3398750187304,38.3892460745005,33.5104311258881,27.6518273689997,16.7225515559653,12.1209108650805,1.58018378967908,0,0,0,0,0,0,0,0,0,0,12.2029288193129,21.6068712281097,0,0,0.161464426695906,0,0,0,5.24665505933731,0,0,2.06386867963222,1.11116716421827,0,0,0.228778173206523,0,0,0,70.6456257331184,6.32671987162271,26.0248917922366,49.0344247330978,63.5628419883985,93.0224521558717,100.339073710307,191.012136181251,87.1647286806819,0,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0,0.352071715937262,16.5359568751817,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0.288635524920988,0,0,0,0,0,0.386379188064381,1.12609485270709,27.4727436400898,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,5.1873233542134,16.561159758151,38.4108612967905,17.6075056607505,25.554247674552,49.116526844157,42.6492568484511,47.4960430195887,47.2543785998301,44.358877480792,37.9138946186013,37.8311690178325,38.8632675097557,39.7453445172844,42.3901385241936,38.5894805396369,42.0542100610877,35.0273015682811,45.4844663215288,50.0589108482706,41.529338641285,49.8331636989901,45.4934284059188,45.9253776426813,43.40729384843,41.8905057878649,43.6695720986819,48.2104604152809,61.1645076106935,37.1327606728665,37.1361898555874,45.0154147486658,43.0724418496985,55.1712907406064,0.249810577937946,48.1899113397541,55.2218608904127,0.765153328275374,10.5883881177367,1.39120701372253
|short_description=p1@Cfi
}}

Revision as of 00:48, 6 August 2015

Short description:p1@Cfi
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cfi_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 35bp_to_NM_007686, uc008rin.1_5end
EntrezGene:12630
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Cfi

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.37
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.03
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.12
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7782.13
Mouse hepatocyte, donor1.CNhs13078.11714-123C4725.53
Mouse hepatocyte, donor3.CNhs12615.11637-122C8814.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F4951.27
Mouse hepatocyte, donor8.CNhs13091.11824-124F6732.52
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7194.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6315.38
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D74.75
adrenal gland, embryo E14.CNhs11038.406-44C58.15
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I132.52
adrenal gland, embryo E18.CNhs11026.1262-18F517.33
adrenal gland, neonate N00.CNhs11191.1311-23C112.46
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A8320.12
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D412.36
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D512.77
intestine, embryo E15.CNhs10602.976-16D817.01
intestine, embryo E16.CNhs10585.463-22H430.45
intestine, embryo E17.CNhs10582.482-18D334.25
intestine, embryo E18.CNhs10526.1289-20F753.83
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E944.80
intestine, neonate N06.CNhs11102.688-20B827.14
intestine, neonate N07.CNhs11095.720-20F227.46
intestine, neonate N10.CNhs11098.755-23A522.03
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C719.01
kidney, neonate N00.CNhs11214.646-21G719.50
kidney, neonate N10.CNhs11206.758-6D58.73
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.83
kidney, neonate N30.CNhs11203.1385-42H13.08
liver, adult pregnant day01.CNhs10466.508-5B21055.37
liver, embryo E12.CNhs10601.355-15F864.07
liver, embryo E13.CNhs10524.378-3H690.22
liver, embryo E14.CNhs10594.409-16E1128.17
liver, embryo E15.CNhs10520.433-16D7197.38
liver, embryo E16.CNhs10523.462-17F5324.87
liver, embryo E17.CNhs10510.481-18A3475.39
liver, embryo E18.CNhs10579.499-43G4481.03
liver, neonate N00.CNhs11117.641-24F4416.20
liver, neonate N03.CNhs11123.1345-25G2729.78
liver, neonate N06.CNhs11101.684-20A81061.01
liver, neonate N07.CNhs11103.716-20H21041.62
liver, neonate N10.CNhs11115.751-24B91162.34
liver, neonate N20.CNhs11220.823-25A3777.44
liver, neonate N25.CNhs11198.1368-26H1646.73
liver, neonate N30.CNhs11106.1382-42D1903.62
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F810.10
lung, embryo E15.CNhs11020.432-17C59.17
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H710.33
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G613.20
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F412.87
pancreas, embryo E15.CNhs11042.1556-45F216.63
pancreas, embryo E16.CNhs11003.460-26E547.34
pancreas, embryo E17.CNhs10599.1558-45G338.39
pancreas, embryo E18.CNhs10580.1535-43I733.51
pancreas, neonate N00.CNhs11105.645-26G927.65
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D812.12
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I712.20
placenta, adult pregnant day17.CNhs10464.577-18G321.61
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H670.65
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G826.02
stomach, embryo E16.CNhs11022.459-17D449.03
stomach, embryo E17.CNhs11006.1035-18D563.56
stomach, embryo E18.CNhs10999.1286-20C693.02
stomach, neonate N03.CNhs11193.1340-24B8100.34
stomach, neonate N07.CNhs11210.718-18A9191.01
stomach, neonate N25.CNhs11104.1355-25E487.16
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I416.54
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E527.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H216.56
whole body, embryo E14.5.CNhs10578.420-27D238.41
whole body, embryo E14.CNhs10519.395-14B117.61
whole body, embryo E16.CNhs10514.453-14F225.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G549.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G547.50
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G547.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G544.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G537.91
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G537.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G538.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G542.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G538.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G535.03
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G545.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G550.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G549.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G545.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G545.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G543.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G541.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G543.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G548.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G561.16
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G537.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G545.02
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G543.07
whole body, embryo E17.5.CNhs10513.490-9F955.17
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B348.19
whole body, neonate N00.CNhs10525.657-19C255.22
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D110.59
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver3.31e-1822
epithelial sac3.31e-1822
digestive gland3.31e-1822
epithelium of foregut-midgut junction3.31e-1822
anatomical boundary3.31e-1822
hepatobiliary system3.31e-1822
foregut-midgut junction3.31e-1822
hepatic diverticulum3.31e-1822
liver primordium3.31e-1822
septum transversum3.31e-1822
liver bud3.31e-1822
digestive tract diverticulum4.29e-1823
sac4.29e-1823
abdomen element2.14e-1549
abdominal segment element2.14e-1549
abdominal segment of trunk2.14e-1549
abdomen2.14e-1549
exocrine gland1.19e-1425
exocrine system1.19e-1425
trunk region element4.41e-1279
subdivision of trunk8.17e-1166
endoderm-derived structure2.35e-09118
endoderm2.35e-09118
presumptive endoderm2.35e-09118
trunk mesenchyme5.85e-0945
digestive system8.12e-09116
digestive tract8.12e-09116
primitive gut8.12e-09116
gastrointestinal system1.07e-0847
mesenchyme2.05e-0861
entire embryonic mesenchyme2.05e-0861
subdivision of digestive tract2.37e-08114
trunk2.37e-0890
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