FFCP PHASE1:Mm9::chrX:136097857..136097878,+: Difference between revisions
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{{FFCP|EntrezGene=66889|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_NM_001254761_5end|description=CAGE_peak_2_at_Rnf128_5end|id=chrX:136097857..136097878,+|ontology_enrichment_celltype=CL:0002563!9.25e-07!9;CL:0002251!9.25e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.75e-08,9;CL:0002251,5.75e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.75e-23!59;UBERON:0000160!1.02e-18!43;UBERON:0004119!1.29e-15!130;UBERON:0000925!1.29e-15!130;UBERON:0006595!1.29e-15!130;UBERON:0001007!3.02e-15!128;UBERON:0001555!3.02e-15!128;UBERON:0007026!3.02e-15!128;UBERON:0004921!4.58e-14!126;UBERON:0004185!4.58e-14!126;UBERON:0000344!2.71e-11!15;UBERON:0001242!8.14e-10!13;UBERON:0000060!8.14e-10!13;UBERON:0001262!8.14e-10!13;UBERON:0004786!8.14e-10!13;UBERON:0004923!9.64e-10!24;UBERON:0001008!2.83e-08!17;UBERON:0006554!7.99e-08!16;UBERON:0000485!4.11e-07!11;UBERON:0003350!9.25e-07!9;UBERON:0004808!9.25e-07!9;UBERON:0001277!9.25e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.93e-26,47;UBERON:0000160,8.21e-24,31;UBERON:0000344,1.54e-13,15;UBERON:0001242,1.01e-11,13;UBERON:0001262,1.01e-11,13;UBERON:0004786,1.01e-11,13;UBERON:0004923,2.08e-09,24;UBERON:0000485,2.12e-08,11;UBERON:0001008,2.14e-08,19;UBERON:0001007,5.59e-08,116;UBERON:0001555,5.59e-08,116;UBERON:0007026,5.59e-08,116;UBERON:0003350,5.75e-08,9;UBERON:0004808,5.75e-08,9;UBERON:0001277,5.75e-08,9;UBERON:0004119,5.95e-08,118;UBERON:0000925,5.95e-08,118;UBERON:0006595,5.95e-08,118;UBERON:0006554,7.36e-08,18;UBERON:0002113,3.71e-07,14;UBERON:0003918,3.71e-07,14;UBERON:0011143,3.71e-07,14;UBERON:0005095,3.71e-07,14;UBERON:0007687,3.71e-07,14;UBERON:0004921,4.88e-07,114|phase1_expression=5.12476310735341,212.177047844732,237.964602200727,222.008731099213,175.313505481222,99.3845289718388,176.377543649622,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7535281597607,0,0,267.667323333369,294.332107609179,246.345512605344,285.595203453467,271.924695649592,477.338829674411,320.330294924872,475.390214844973,0,0,0,66.7247241625444,64.3328077537365,58.1882665347752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,4.05810284182349,0,0,0,0,0,18.2577746171277,0,0,0,7.88723150749411,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,55.3791816637441,0,0,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0.376999773989026,22.2475470960936,0,0,0.485300549842228,0,0,145.385573750135,0,0.41889341362691,216.372125761677,0,0,0,0,0,0,0,0,0,0,10.9986512958342,59.2177180104043,323.485130795104,25.2530227063769,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,11.1242449417777,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,661.828822316547,207.064793697555,1.2797295032114,2.78684006232526,26.9332994163175,62.7235761578595,85.6155468802751,159.409074682325,178.897456202281,209.497070408942,182.720696797796,189.605517855217,158.700766914964,141.114647158713,128.602139675443,175.244320463843,0.569003702859245,7.19765629441292,11.270773567308,12.2190796707189,16.6799138964158,19.7783012090698,18.3385957660346,25.97938604441,23.5498091762062,22.5816809976895,0.296452627087149,2.16898637430922,3.53806191203765,2.69834534861824,1.62288097110802,1.68824011826692,1.01850340712568,0.575392274901621,0.324270453550071,0,0,0,0.312037673114561,0.252578877947112,0.717589654087649,0,2.21703828199926,0.189491411770485,0.162964976442026,0.848725428875941,0,0.670025029767263,0.476087281772027,0.195133647857799,0,0.664394068946325,0.478364305972461,1.14704320301017,1.03610989119537,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,89.280313596001,1.24645922567079,5.04949573996086,194.004864615702,0,0,0.604647113929502,0.754420319023592,2.06711325016541,1.22974059177571,41.6069552000836,4.72593848320757,4.9909632973861,7.58488219045958,1.05418608574999,5.15677716240934,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0.704015124191131,2.1183207086382,163.852599754837,0,0,0.0603129249281559,0,0.984845398470368,158.857055963269,0,0,0.619160603889667,1.48155621895769,1.13021074202815,0.136694227721025,0.228778173206523,0,0,0,223.392924615537,1.73984796469624,8.53941761932765,26.6773191829849,37.2177166905754,72.7147337274771,76.0634913610389,108.110720088739,198.934515907863,83.7312727464982,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,1.95306577265925,0,0,2.59227005632079,0,0,0.513554785824136,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.605798699688886,0.15241361331,0.504130925684203,0.38983152295901,0.673482891482306,0.233753804363138,0,0,0,0,126.925563279149,22.709579529593,740.115713664018,30.8690465873855,65.7059456286326,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.682934423016537,1.21553358534147,0.209613162627982,1.65459157605013,6.88964856185007,5.76898160268904,10.5903339165299,4.80124702351215,7.35089969681695,6.79054828989874,7.49132059759059,7.23484222175023,5.34149861287203,7.1444053692461,6.60540657885676,7.5234595980845,9.47797571847605,5.5935589651071,9.60033906679163,7.80893547101085,5.48403236878838,7.55801366488108,8.75217237862575,7.53070010235921,8.78054269789308,5.5244639401947,6.92600980613895,8.97827634652382,5.45721083371201,5.51625101303155,6.13846564754534,5.42278944150881,5.01557188550968,0,12.3983752476066,15.4707158914775,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p2@Rnf128}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66889 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NM_001254761_5end | |||
|cluster_id=chrX:136097857..136097878,+ | |||
|description=CAGE_peak_2_at_Rnf128_5end | |||
|id=chrX:136097857..136097878,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.25e-07!9;CL:0002251!9.25e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.75e-08,9;CL:0002251,5.75e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.75e-23!59;UBERON:0000160!1.02e-18!43;UBERON:0004119!1.29e-15!130;UBERON:0000925!1.29e-15!130;UBERON:0006595!1.29e-15!130;UBERON:0001007!3.02e-15!128;UBERON:0001555!3.02e-15!128;UBERON:0007026!3.02e-15!128;UBERON:0004921!4.58e-14!126;UBERON:0004185!4.58e-14!126;UBERON:0000344!2.71e-11!15;UBERON:0001242!8.14e-10!13;UBERON:0000060!8.14e-10!13;UBERON:0001262!8.14e-10!13;UBERON:0004786!8.14e-10!13;UBERON:0004923!9.64e-10!24;UBERON:0001008!2.83e-08!17;UBERON:0006554!7.99e-08!16;UBERON:0000485!4.11e-07!11;UBERON:0003350!9.25e-07!9;UBERON:0004808!9.25e-07!9;UBERON:0001277!9.25e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.93e-26,47;UBERON:0000160,8.21e-24,31;UBERON:0000344,1.54e-13,15;UBERON:0001242,1.01e-11,13;UBERON:0001262,1.01e-11,13;UBERON:0004786,1.01e-11,13;UBERON:0004923,2.08e-09,24;UBERON:0000485,2.12e-08,11;UBERON:0001008,2.14e-08,19;UBERON:0001007,5.59e-08,116;UBERON:0001555,5.59e-08,116;UBERON:0007026,5.59e-08,116;UBERON:0003350,5.75e-08,9;UBERON:0004808,5.75e-08,9;UBERON:0001277,5.75e-08,9;UBERON:0004119,5.95e-08,118;UBERON:0000925,5.95e-08,118;UBERON:0006595,5.95e-08,118;UBERON:0006554,7.36e-08,18;UBERON:0002113,3.71e-07,14;UBERON:0003918,3.71e-07,14;UBERON:0011143,3.71e-07,14;UBERON:0005095,3.71e-07,14;UBERON:0007687,3.71e-07,14;UBERON:0004921,4.88e-07,114 | |||
|phase1_expression=5.12476310735341,212.177047844732,237.964602200727,222.008731099213,175.313505481222,99.3845289718388,176.377543649622,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7535281597607,0,0,267.667323333369,294.332107609179,246.345512605344,285.595203453467,271.924695649592,477.338829674411,320.330294924872,475.390214844973,0,0,0,66.7247241625444,64.3328077537365,58.1882665347752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186399445825301,0,0,4.05810284182349,0,0,0,0,0,18.2577746171277,0,0,0,7.88723150749411,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,55.3791816637441,0,0,0.173485326766136,0,0.230615497256059,0,0.587943535678524,0.376999773989026,22.2475470960936,0,0,0.485300549842228,0,0,145.385573750135,0,0.41889341362691,216.372125761677,0,0,0,0,0,0,0,0,0,0,10.9986512958342,59.2177180104043,323.485130795104,25.2530227063769,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,11.1242449417777,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,661.828822316547,207.064793697555,1.2797295032114,2.78684006232526,26.9332994163175,62.7235761578595,85.6155468802751,159.409074682325,178.897456202281,209.497070408942,182.720696797796,189.605517855217,158.700766914964,141.114647158713,128.602139675443,175.244320463843,0.569003702859245,7.19765629441292,11.270773567308,12.2190796707189,16.6799138964158,19.7783012090698,18.3385957660346,25.97938604441,23.5498091762062,22.5816809976895,0.296452627087149,2.16898637430922,3.53806191203765,2.69834534861824,1.62288097110802,1.68824011826692,1.01850340712568,0.575392274901621,0.324270453550071,0,0,0,0.312037673114561,0.252578877947112,0.717589654087649,0,2.21703828199926,0.189491411770485,0.162964976442026,0.848725428875941,0,0.670025029767263,0.476087281772027,0.195133647857799,0,0.664394068946325,0.478364305972461,1.14704320301017,1.03610989119537,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,89.280313596001,1.24645922567079,5.04949573996086,194.004864615702,0,0,0.604647113929502,0.754420319023592,2.06711325016541,1.22974059177571,41.6069552000836,4.72593848320757,4.9909632973861,7.58488219045958,1.05418608574999,5.15677716240934,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0.704015124191131,2.1183207086382,163.852599754837,0,0,0.0603129249281559,0,0.984845398470368,158.857055963269,0,0,0.619160603889667,1.48155621895769,1.13021074202815,0.136694227721025,0.228778173206523,0,0,0,223.392924615537,1.73984796469624,8.53941761932765,26.6773191829849,37.2177166905754,72.7147337274771,76.0634913610389,108.110720088739,198.934515907863,83.7312727464982,0.621339313086926,0,0.149516546043979,0.165458490457098,0.194451188344048,0.129159823477731,0,0,1.95306577265925,0,0,2.59227005632079,0,0,0.513554785824136,0.389762468933385,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.605798699688886,0.15241361331,0.504130925684203,0.38983152295901,0.673482891482306,0.233753804363138,0,0,0,0,126.925563279149,22.709579529593,740.115713664018,30.8690465873855,65.7059456286326,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.682934423016537,1.21553358534147,0.209613162627982,1.65459157605013,6.88964856185007,5.76898160268904,10.5903339165299,4.80124702351215,7.35089969681695,6.79054828989874,7.49132059759059,7.23484222175023,5.34149861287203,7.1444053692461,6.60540657885676,7.5234595980845,9.47797571847605,5.5935589651071,9.60033906679163,7.80893547101085,5.48403236878838,7.55801366488108,8.75217237862575,7.53070010235921,8.78054269789308,5.5244639401947,6.92600980613895,8.97827634652382,5.45721083371201,5.51625101303155,6.13846564754534,5.42278944150881,5.01557188550968,0,12.3983752476066,15.4707158914775,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Rnf128 | |||
}} |
Revision as of 00:56, 6 August 2015
Short description: | p2@Rnf128 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnf128_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_NM_001254761_5end |
EntrezGene: | 66889 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.75e-08 | 9 |
epithelial cell of alimentary canal | 5.75e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.93e-26 | 47 |
intestine | 8.21e-24 | 31 |
mucosa | 1.54e-13 | 15 |
intestinal mucosa | 1.01e-11 | 13 |
wall of intestine | 1.01e-11 | 13 |
gastrointestinal system mucosa | 1.01e-11 | 13 |
organ component layer | 2.08e-09 | 24 |
simple columnar epithelium | 2.12e-08 | 11 |
renal system | 2.14e-08 | 19 |
digestive system | 5.59e-08 | 116 |
digestive tract | 5.59e-08 | 116 |
primitive gut | 5.59e-08 | 116 |
epithelium of mucosa | 5.75e-08 | 9 |
gastrointestinal system epithelium | 5.75e-08 | 9 |
intestinal epithelium | 5.75e-08 | 9 |
endoderm-derived structure | 5.95e-08 | 118 |
endoderm | 5.95e-08 | 118 |
presumptive endoderm | 5.95e-08 | 118 |
urinary system structure | 7.36e-08 | 18 |
kidney | 3.71e-07 | 14 |
kidney mesenchyme | 3.71e-07 | 14 |
upper urinary tract | 3.71e-07 | 14 |
kidney rudiment | 3.71e-07 | 14 |
kidney field | 3.71e-07 | 14 |
subdivision of digestive tract | 4.88e-07 | 114 |