FFCP PHASE1:Mm9::chr1:79759005..79759018,-: Difference between revisions
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{{FFCP|EntrezGene=69368|HGNC=|UniProt=D3YWG9|association_with_transcript=-383bp_to_ENSMUST00000125641_5end|description=CAGE_peak_7_at_Wdfy1_5end|id=chr1:79759005..79759018,-|ontology_enrichment_celltype=CL:0000117!5.99e-19!23;CL:0000337!5.99e-19!23;CL:0000540!9.37e-16!33;CL:0000047!9.37e-16!33;CL:0000031!9.37e-16!33;CL:0000404!9.37e-16!33;CL:0000393!1.23e-12!39;CL:0000211!1.23e-12!39;CL:0000221!4.61e-12!44;CL:0000133!4.61e-12!44;CL:0002319!4.77e-11!43;CL:0002609!6.00e-09!6;CL:0000055!6.79e-09!50;CL:0000120!8.67e-08!3;CL:0002612!1.17e-07!3;CL:0002608!4.69e-07!3|ontology_enrichment_celltype_v019_2=CL:0000120,2.10e-37,3;CL:0000117,1.06e-26,23;CL:0000337,1.06e-26,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0002613,7.36e-18,3;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.65e-08!34;UBERON:0002257!1.17e-07!3;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0001948!1.45e-07!5;UBERON:0002315!1.45e-07!5;UBERON:0004121!1.62e-07!102;UBERON:0000924!1.62e-07!102;UBERON:0006601!1.62e-07!102;UBERON:0007811!2.92e-07!86;UBERON:0001017!4.73e-07!73;UBERON:0005743!4.73e-07!73;UBERON:0000153!5.74e-07!94;UBERON:0000073!9.75e-07!75;UBERON:0001016!9.75e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.96e-11,5;UBERON:0002435,3.96e-11,5;UBERON:0000204,3.96e-11,5;UBERON:0010082,3.96e-11,5;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002420,2.64e-07,8;UBERON:0007245,2.64e-07,8;UBERON:0010009,2.64e-07,8;UBERON:0010011,2.64e-07,8;UBERON:0000454,2.64e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0.675029691658453,0.420649922702764,0,0.441737081903227,0.122490799214954,0.670918297127655,1.83843757322004,0,0,0,1.45074916503213,2.19570344645783,0,0,0,0.30559649555362,0.883885756421003,0.711858403995515,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p7@Wdfy1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69368 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YWG9 | |||
|association_with_transcript=-383bp_to_ENSMUST00000125641_5end | |||
|cluster_id=chr1:79759005..79759018,- | |||
|description=CAGE_peak_7_at_Wdfy1_5end | |||
|id=chr1:79759005..79759018,- | |||
|ontology_enrichment_celltype=CL:0000117!5.99e-19!23;CL:0000337!5.99e-19!23;CL:0000540!9.37e-16!33;CL:0000047!9.37e-16!33;CL:0000031!9.37e-16!33;CL:0000404!9.37e-16!33;CL:0000393!1.23e-12!39;CL:0000211!1.23e-12!39;CL:0000221!4.61e-12!44;CL:0000133!4.61e-12!44;CL:0002319!4.77e-11!43;CL:0002609!6.00e-09!6;CL:0000055!6.79e-09!50;CL:0000120!8.67e-08!3;CL:0002612!1.17e-07!3;CL:0002608!4.69e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.10e-37,3;CL:0000117,1.06e-26,23;CL:0000337,1.06e-26,23;CL:0000540,1.03e-18,33;CL:0000047,1.03e-18,33;CL:0000031,1.03e-18,33;CL:0000404,1.03e-18,33;CL:0002613,7.36e-18,3;CL:0000393,7.07e-16,39;CL:0000211,7.07e-16,39;CL:0002319,2.01e-14,43;CL:0000221,4.23e-14,44;CL:0000133,4.23e-14,44;CL:0002321,6.38e-09,70;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.65e-08!34;UBERON:0002257!1.17e-07!3;UBERON:0002346!1.21e-07!71;UBERON:0003075!1.21e-07!71;UBERON:0007284!1.21e-07!71;UBERON:0001948!1.45e-07!5;UBERON:0002315!1.45e-07!5;UBERON:0004121!1.62e-07!102;UBERON:0000924!1.62e-07!102;UBERON:0006601!1.62e-07!102;UBERON:0007811!2.92e-07!86;UBERON:0001017!4.73e-07!73;UBERON:0005743!4.73e-07!73;UBERON:0000153!5.74e-07!94;UBERON:0000073!9.75e-07!75;UBERON:0001016!9.75e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,3.96e-11,5;UBERON:0002435,3.96e-11,5;UBERON:0000204,3.96e-11,5;UBERON:0010082,3.96e-11,5;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0002420,2.64e-07,8;UBERON:0007245,2.64e-07,8;UBERON:0010009,2.64e-07,8;UBERON:0010011,2.64e-07,8;UBERON:0000454,2.64e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522399578277871,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0,0,0.675029691658453,0.420649922702764,0,0.441737081903227,0.122490799214954,0.670918297127655,1.83843757322004,0,0,0,1.45074916503213,2.19570344645783,0,0,0,0.30559649555362,0.883885756421003,0.711858403995515,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0,0.201932899896295,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.233753804363138,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Wdfy1 | |||
}} | |||
Revision as of 01:26, 6 August 2015
| Short description: | p7@Wdfy1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_Wdfy1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -383bp_to_ENSMUST00000125641_5end |
| EntrezGene: | 69368 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| granule cell | 2.10e-37 | 3 |
| CNS neuron (sensu Vertebrata) | 1.06e-26 | 23 |
| neuroblast (sensu Vertebrata) | 1.06e-26 | 23 |
| neuron | 1.03e-18 | 33 |
| neuronal stem cell | 1.03e-18 | 33 |
| neuroblast | 1.03e-18 | 33 |
| electrically signaling cell | 1.03e-18 | 33 |
| striatum neuron | 7.36e-18 | 3 |
| electrically responsive cell | 7.07e-16 | 39 |
| electrically active cell | 7.07e-16 | 39 |
| neural cell | 2.01e-14 | 43 |
| ectodermal cell | 4.23e-14 | 44 |
| neurectodermal cell | 4.23e-14 | 44 |
| embryonic cell | 6.38e-09 | 70 |
| somatic stem cell | 7.08e-07 | 91 |
| multi fate stem cell | 7.08e-07 | 91 |
| Ontology term | p-value | n |
|---|---|---|
| corpus striatum | 3.96e-11 | 5 |
| striatum | 3.96e-11 | 5 |
| ventral part of telencephalon | 3.96e-11 | 5 |
| future corpus striatum | 3.96e-11 | 5 |
| central nervous system | 1.47e-08 | 73 |
| nervous system | 2.47e-08 | 75 |
| basal ganglion | 2.64e-07 | 8 |
| nuclear complex of neuraxis | 2.64e-07 | 8 |
| aggregate regional part of brain | 2.64e-07 | 8 |
| collection of basal ganglia | 2.64e-07 | 8 |
| cerebral subcortex | 2.64e-07 | 8 |