FFCP PHASE1:Mm9::chr13:6108314..6108324,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:6108314..6108324,-|id=chr13:6108314..6108324,-|ontology_enrichment_celltype=CL:0000239!2.66e-19!6;CL:0000677!2.66e-19!6;CL:0000212!2.66e-19!6;CL:0000584!2.66e-19!6;CL:0000075!1.82e-16!7;CL:0002563!1.12e-12!9;CL:0002251!1.12e-12!9;CL:0000473!8.26e-11!3;CL:0000627!8.26e-11!3;CL:0000682!8.26e-11!3;CL:0000066!2.65e-09!25;CL:0002076!2.31e-07!15;CL:0000325!2.83e-07!2;CL:0000217!2.83e-07!2;CL:0000328!2.83e-07!2;CL:0002573!2.83e-07!2;CL:0002376!2.83e-07!2;CL:0000218!2.83e-07!2;CL:0000692!2.83e-07!2;CL:0002377!2.83e-07!2;CL:0002375!2.83e-07!2|ontology_enrichment_celltype_v019_2=CL:0000682,5.91e-22,3;CL:0000239,1.04e-11,6;CL:0000677,1.04e-11,6;CL:0000584,1.04e-11,6;CL:0000066,2.99e-10,25;CL:0000075,4.03e-10,7;CL:0000473,8.77e-10,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.66e-25!15;UBERON:0001242!1.01e-19!13;UBERON:0000060!1.01e-19!13;UBERON:0001262!1.01e-19!13;UBERON:0004786!1.01e-19!13;UBERON:0000160!1.04e-16!43;UBERON:0004923!7.12e-15!24;UBERON:0005409!7.82e-13!59;UBERON:0003350!1.12e-12!9;UBERON:0004808!1.12e-12!9;UBERON:0001277!1.12e-12!9;UBERON:0000331!1.93e-11!3;UBERON:0002116!1.93e-11!3;UBERON:0001204!1.93e-11!3;UBERON:0001168!1.93e-11!3;UBERON:0000485!2.90e-10!11;UBERON:0001962!2.83e-07!2;UBERON:0001961!2.83e-07!2;UBERON:0001744!2.83e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.27e-24,15;UBERON:0000331,2.38e-23,3;UBERON:0002116,2.38e-23,3;UBERON:0001204,2.38e-23,3;UBERON:0001168,2.38e-23,3;UBERON:0001242,1.64e-20,13;UBERON:0001262,1.64e-20,13;UBERON:0004786,1.64e-20,13;UBERON:0002108,1.09e-17,4;UBERON:0000160,7.00e-15,31;UBERON:0004923,1.01e-14,24;UBERON:0005409,1.33e-09,47;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9|phase1_expression=0,2.09385244583617,1.36499771816861,0.60492842261366,2.00358291978539,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.22940928106717,1.14846392823004,1.29228598847722,1.50829862880122,5.89072600314759,4.53654233567875,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.982430281388212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:6108314..6108324,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:6108314..6108324,- | |||
|description=CAGE_peak_at_chr13:6108314..6108324,- | |||
|id=chr13:6108314..6108324,- | |||
|ontology_enrichment_celltype=CL:0000239!2.66e-19!6;CL:0000677!2.66e-19!6;CL:0000212!2.66e-19!6;CL:0000584!2.66e-19!6;CL:0000075!1.82e-16!7;CL:0002563!1.12e-12!9;CL:0002251!1.12e-12!9;CL:0000473!8.26e-11!3;CL:0000627!8.26e-11!3;CL:0000682!8.26e-11!3;CL:0000066!2.65e-09!25;CL:0002076!2.31e-07!15;CL:0000325!2.83e-07!2;CL:0000217!2.83e-07!2;CL:0000328!2.83e-07!2;CL:0002573!2.83e-07!2;CL:0002376!2.83e-07!2;CL:0000218!2.83e-07!2;CL:0000692!2.83e-07!2;CL:0002377!2.83e-07!2;CL:0002375!2.83e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.91e-22,3;CL:0000239,1.04e-11,6;CL:0000677,1.04e-11,6;CL:0000584,1.04e-11,6;CL:0000066,2.99e-10,25;CL:0000075,4.03e-10,7;CL:0000473,8.77e-10,7;CL:0002563,5.41e-08,9;CL:0002251,5.41e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.66e-25!15;UBERON:0001242!1.01e-19!13;UBERON:0000060!1.01e-19!13;UBERON:0001262!1.01e-19!13;UBERON:0004786!1.01e-19!13;UBERON:0000160!1.04e-16!43;UBERON:0004923!7.12e-15!24;UBERON:0005409!7.82e-13!59;UBERON:0003350!1.12e-12!9;UBERON:0004808!1.12e-12!9;UBERON:0001277!1.12e-12!9;UBERON:0000331!1.93e-11!3;UBERON:0002116!1.93e-11!3;UBERON:0001204!1.93e-11!3;UBERON:0001168!1.93e-11!3;UBERON:0000485!2.90e-10!11;UBERON:0001962!2.83e-07!2;UBERON:0001961!2.83e-07!2;UBERON:0001744!2.83e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.27e-24,15;UBERON:0000331,2.38e-23,3;UBERON:0002116,2.38e-23,3;UBERON:0001204,2.38e-23,3;UBERON:0001168,2.38e-23,3;UBERON:0001242,1.64e-20,13;UBERON:0001262,1.64e-20,13;UBERON:0004786,1.64e-20,13;UBERON:0002108,1.09e-17,4;UBERON:0000160,7.00e-15,31;UBERON:0004923,1.01e-14,24;UBERON:0005409,1.33e-09,47;UBERON:0003350,5.41e-08,9;UBERON:0004808,5.41e-08,9;UBERON:0001277,5.41e-08,9 | |||
|phase1_expression=0,2.09385244583617,1.36499771816861,0.60492842261366,2.00358291978539,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.22940928106717,1.14846392823004,1.29228598847722,1.50829862880122,5.89072600314759,4.53654233567875,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.982430281388212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0.474529061544512,0,0,0,0,1.79763881730844,0.864552199498777,0.995706366271836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:6108314..6108324,- | |||
}} |
Latest revision as of 05:51, 6 August 2015
Short description: | p@chr13:6108314..6108324, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:6108314..6108324, - |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.91e-22 | 3 |
brush border epithelial cell | 1.04e-11 | 6 |
gut absorptive cell | 1.04e-11 | 6 |
enterocyte | 1.04e-11 | 6 |
epithelial cell | 2.99e-10 | 25 |
columnar/cuboidal epithelial cell | 4.03e-10 | 7 |
defensive cell | 8.77e-10 | 7 |
intestinal epithelial cell | 5.41e-08 | 9 |
epithelial cell of alimentary canal | 5.41e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.27e-24 | 15 |
ileal mucosa | 2.38e-23 | 3 |
ileum | 2.38e-23 | 3 |
mucosa of small intestine | 2.38e-23 | 3 |
wall of small intestine | 2.38e-23 | 3 |
intestinal mucosa | 1.64e-20 | 13 |
wall of intestine | 1.64e-20 | 13 |
gastrointestinal system mucosa | 1.64e-20 | 13 |
small intestine | 1.09e-17 | 4 |
intestine | 7.00e-15 | 31 |
organ component layer | 1.01e-14 | 24 |
gastrointestinal system | 1.33e-09 | 47 |
epithelium of mucosa | 5.41e-08 | 9 |
gastrointestinal system epithelium | 5.41e-08 | 9 |
intestinal epithelium | 5.41e-08 | 9 |