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FFCP PHASE1:Mm9::chrX:39503849..39503898,+: Difference between revisions

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{{FFCP|EntrezGene=20843|HGNC=|MCL_coexpression_id=1162|UniProt=O35638,Q3TG33|association_with_transcript=0bp_to_ENSMUST00000069619,NM_021465,uc009taz.1_5end|description=CAGE_peak_1_at_Stag2_5end|id=chrX:39503849..39503898,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.02e-11!130;UBERON:0000925!1.02e-11!130;UBERON:0006595!1.02e-11!130;UBERON:0001007!1.23e-11!128;UBERON:0001555!1.23e-11!128;UBERON:0007026!1.23e-11!128;UBERON:0004921!3.89e-11!126;UBERON:0004185!3.89e-11!126;UBERON:0005911!1.89e-10!69;UBERON:0000077!1.25e-08!97;UBERON:0005057!1.53e-08!51;UBERON:0003104!3.46e-08!131;UBERON:0009142!3.46e-08!131;UBERON:0001041!3.89e-08!92;UBERON:0000490!5.57e-08!66;UBERON:0003929!1.52e-07!55;UBERON:0002405!5.59e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-13,118;UBERON:0000925,1.29e-13,118;UBERON:0006595,1.29e-13,118;UBERON:0001007,1.47e-13,116;UBERON:0001555,1.47e-13,116;UBERON:0007026,1.47e-13,116;UBERON:0004921,5.04e-13,114;UBERON:0005911,1.89e-10,69;UBERON:0001041,3.98e-10,80;UBERON:0000490,5.57e-08,66;UBERON:0003929,1.52e-07,55;UBERON:0001048,4.75e-07,134|phase1_expression=29.7876855614917,42.574999732002,31.394947517878,54.1410938239226,50.0895729946347,22.9994602519289,24.0621019813391,61.7209486050735,84.895599457455,89.1785845286795,24.6553874244727,27.2023062174097,77.7251313887674,71.4224687763209,44.3035983214831,66.2094124364731,73.4539972034554,51.2626018707136,52.7890569382094,48.3804203049754,18.1992640923289,35.6454514811178,36.5679704794509,46.7177874556748,37.3937128139487,28.711598205751,26.2764817657036,31.6742712048257,64.4179391957107,56.2027189364646,27.7163138319131,12.7006134691926,15.3766196896143,31.6963362030877,36.3953040886606,38.8989070138872,32.8712663582414,160.716146202973,110.168283577856,178.521596695065,173.528288969149,173.493553179445,176.240258150309,29.9634426781874,26.9662637043909,31.7535881239709,3.9119567217402,5.88667922227206,4.17403747195497,6.61061656852564,4.05960622713551,4.31257693094915,52.3481730900137,74.7123006271685,58.4803210507887,34.4727644288169,37.5358806319771,21.1425557833751,3.43937983461316,2.64495489636016,4.43681982454325,6.77689064138264,7.11435836888911,4.94944844504769,4.94433181283487,2.8419204597844,4.19440154725767,2.30530983192933,7.56934169851887,5.26523159493594,5.8890989178387,2.28520787523043,3.3130281142742,8.20688354740192,6.13411014516713,7.35375029288017,6.60695285996332,11.1087984134113,12.4421291937557,2.90149833006426,3.56801810049398,3.12548022334056,3.35019598801657,9.00420176050688,13.1406493088057,7.95497180778903,11.8168495063255,5.21918448310842,33.1680726799346,35.4430616900824,51.8857434776003,27.5335640634044,4.0798280022465,35.0807074564581,37.6870322119648,27.7776670000348,33.4257719913569,35.6199374188141,21.0426663728324,19.7870161725791,27.1827800168993,21.815501160434,5.09610479413291,7.11066703153331,15.154372870785,16.4683912558814,14.1546844604139,40.5352773002663,105.128780760752,24.7898372238257,18.5629299639765,24.3572382649713,23.753396217374,28.0344111427878,33.9831363622187,21.8659868913635,36.337660256953,36.8728360145775,62.8073491884411,41.4123135865367,45.0516697659203,45.0933985415757,14.9113408974498,33.6697916563279,34.5587066242201,53.6459815938042,38.8201003399182,22.7963037777495,35.1984528992389,15.4284358586967,16.4700217014706,12.3141265070607,13.9059456153821,14.0643501531682,14.5451631191692,14.6017136760982,32.3849177044006,41.8007421249913,15.9215337813215,48.401626853889,25.1132454918018,19.7715809812787,30.430499937104,37.6762044589288,31.8410816028214,30.3629517075094,24.17504493641,46.3079033622838,15.9520314770303,28.3659120251729,28.1521798662318,24.1115305670332,38.3705203931325,54.6755901439801,59.0594731490798,25.8744546864041,24.5774615559632,31.1390967608805,24.7222244474166,31.2759916528608,31.4264920374669,31.5108607556776,33.3810077175146,41.1237244352074,32.2418265934621,35.8102274915628,28.9735273511589,39.1163896930018,25.5067767365895,33.1618277439772,29.4279778651456,19.8831982898452,18.4422096844483,24.6939810519084,15.3511662451813,15.4356918568927,90.2043277545769,42.5765412328306,27.9407608201156,34.6032641072053,32.4746002531675,36.9080850060717,25.795853086005,26.6315876557583,46.0293189698176,26.0224348463937,29.6575546384318,33.2257308308722,26.3201517610812,33.2563181202062,49.495613421305,64.3226312611606,4.36236172192088,28.9048736902614,28.1769339182701,31.769607143869,33.9416852543345,30.0181309130563,29.1520436142826,31.2933513716757,27.7887748279233,27.7643618824051,36.1672205046322,54.3915044634467,48.5500717929611,58.2392871076771,65.7266793298749,64.6354788136477,56.7815649472566,65.8824154762356,60.6385748138632,42.8315804573407,54.6319184803947,45.7733365632259,31.5158049845706,34.0981485228601,38.3910464936892,43.419916922703,50.4376209154831,24.4443921183925,34.0596800763834,32.0818212115106,40.13203245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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:20843
|HGNC=
|MCL_coexpression_id=1162
|TSSclassifier=NA
|UniProt=uniprot:O35638,uniprot:Q3TG33
|association_with_transcript=0bp_to_ENSMUST00000069619,NM_021465,uc009taz.1_5end
|cluster_id=chrX:39503849..39503898,+
|description=CAGE_peak_1_at_Stag2_5end
|id=chrX:39503849..39503898,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.29e-13,118;UBERON:0000925,1.29e-13,118;UBERON:0006595,1.29e-13,118;UBERON:0001007,1.47e-13,116;UBERON:0001555,1.47e-13,116;UBERON:0007026,1.47e-13,116;UBERON:0004921,5.04e-13,114;UBERON:0005911,1.89e-10,69;UBERON:0001041,3.98e-10,80;UBERON:0000490,5.57e-08,66;UBERON:0003929,1.52e-07,55;UBERON:0001048,4.75e-07,134
|phase1_expression=29.7876855614917,42.574999732002,31.394947517878,54.1410938239226,50.0895729946347,22.9994602519289,24.0621019813391,61.7209486050735,84.895599457455,89.1785845286795,24.6553874244727,27.2023062174097,77.7251313887674,71.4224687763209,44.3035983214831,66.2094124364731,73.4539972034554,51.2626018707136,52.7890569382094,48.3804203049754,18.1992640923289,35.6454514811178,36.5679704794509,46.7177874556748,37.3937128139487,28.711598205751,26.2764817657036,31.6742712048257,64.4179391957107,56.2027189364646,27.7163138319131,12.7006134691926,15.3766196896143,31.6963362030877,36.3953040886606,38.8989070138872,32.8712663582414,160.716146202973,110.168283577856,178.521596695065,173.528288969149,173.493553179445,176.240258150309,29.9634426781874,26.9662637043909,31.7535881239709,3.9119567217402,5.88667922227206,4.17403747195497,6.61061656852564,4.05960622713551,4.31257693094915,52.3481730900137,74.7123006271685,58.4803210507887,34.4727644288169,37.5358806319771,21.1425557833751,3.43937983461316,2.64495489636016,4.43681982454325,6.77689064138264,7.11435836888911,4.94944844504769,4.94433181283487,2.8419204597844,4.19440154725767,2.30530983192933,7.56934169851887,5.26523159493594,5.8890989178387,2.28520787523043,3.3130281142742,8.20688354740192,6.13411014516713,7.35375029288017,6.60695285996332,11.1087984134113,12.4421291937557,2.90149833006426,3.56801810049398,3.12548022334056,3.35019598801657,9.00420176050688,13.1406493088057,7.95497180778903,11.8168495063255,5.21918448310842,33.1680726799346,35.4430616900824,51.8857434776003,27.5335640634044,4.0798280022465,35.0807074564581,37.6870322119648,27.7776670000348,33.4257719913569,35.6199374188141,21.0426663728324,19.7870161725791,27.1827800168993,21.815501160434,5.09610479413291,7.11066703153331,15.154372870785,16.4683912558814,14.1546844604139,40.5352773002663,105.128780760752,24.7898372238257,18.5629299639765,24.3572382649713,23.753396217374,28.0344111427878,33.9831363622187,21.8659868913635,36.337660256953,36.8728360145775,62.8073491884411,41.4123135865367,45.0516697659203,45.0933985415757,14.9113408974498,33.6697916563279,34.5587066242201,53.6459815938042,38.8201003399182,22.7963037777495,35.1984528992389,15.4284358586967,16.4700217014706,12.3141265070607,13.9059456153821,14.0643501531682,14.5451631191692,14.6017136760982,32.3849177044006,41.8007421249913,15.9215337813215,48.401626853889,25.1132454918018,19.7715809812787,30.430499937104,37.6762044589288,31.8410816028214,30.3629517075094,24.17504493641,46.3079033622838,15.9520314770303,28.3659120251729,28.1521798662318,24.1115305670332,38.3705203931325,54.6755901439801,59.0594731490798,25.8744546864041,24.5774615559632,31.1390967608805,24.7222244474166,31.2759916528608,31.4264920374669,31.5108607556776,33.3810077175146,41.1237244352074,32.2418265934621,35.8102274915628,28.9735273511589,39.1163896930018,25.5067767365895,33.1618277439772,29.4279778651456,19.8831982898452,18.4422096844483,24.6939810519084,15.3511662451813,15.4356918568927,90.2043277545769,42.5765412328306,27.9407608201156,34.6032641072053,32.4746002531675,36.9080850060717,25.795853086005,26.6315876557583,46.0293189698176,26.0224348463937,29.6575546384318,33.2257308308722,26.3201517610812,33.2563181202062,49.495613421305,64.3226312611606,4.36236172192088,28.9048736902614,28.1769339182701,31.769607143869,33.9416852543345,30.0181309130563,29.1520436142826,31.2933513716757,27.7887748279233,27.7643618824051,36.1672205046322,54.3915044634467,48.5500717929611,58.2392871076771,65.7266793298749,64.6354788136477,56.7815649472566,65.8824154762356,60.6385748138632,42.8315804573407,54.6319184803947,45.7733365632259,31.5158049845706,34.0981485228601,38.3910464936892,43.419916922703,50.4376209154831,24.4443921183925,34.0596800763834,32.0818212115106,40.1320324573339,52.9319773516138,52.369600994923,40.78293240228,49.497435249344,43.6285438608087,36.8340515598795,53.9110305414778,44.2073553576693,49.1806799177139,15.0791283939272,23.9318500880232,28.5223278351041,35.043966780701,17.5000143086693,15.9407893765396,32.7869890753351,33.3261623909772,23.0321000173867,28.5020283336546,23.0503035574095,23.8968797952552,22.5026660823218,28.3076530788832,26.3126956088681,23.9649803487276,28.0654322342032,17.3513510867776,38.4657630914408,14.0671826897132,37.1382267326153,37.1182776688205,30.5313818181915,23.5497217070332,23.5812374432506,28.6679721228965,9.15435867930396,29.513774202617,27.9102556621679,34.1721705708855,30.3022771627013,36.6602639205547,28.4630243152497,25.7838858120467,38.8101150559318,29.8901416091975,5.56242340265844,23.5770738534752,31.5665615883247,26.2202161875044,26.9860393787478,11.5696680663548,29.3339635079638,37.2824444720324,57.7784402904,47.8170133530292,72.0131343063739,51.7484895883577,55.3887676174553,60.0755693066924,49.2602613904448,18.7279555030615,55.5330362593021,26.004745363366,55.3731636835438,65.1754861236231,70.67091573177,55.3643179159785,30.9360742588817,33.8682514623252,36.8993930057811,20.0480829783174,26.8885594543965,28.261405930632,37.2618425835214,31.5723326981848,31.8809343069419,32.9069005178963,38.5991638237319,37.4310997037162,50.2906096372156,50.328484360041,4.50954350947352,30.0528257548397,21.1786867785085,27.4176175565107,28.0276816946676,38.859908862879,42.3659631511172,22.1347454234715,17.1969324858166,8.69702834973622,10.657110231541,50.5617793005085,19.2588954525656,28.2455132203275,34.4290180891157,42.2503001775256,39.5375896014717,40.0250846901496,44.011479098024,50.1803256242294,39.5513326539449,45.3717833115782,48.826398250616,46.2778958289985,49.9064372315299,32.6491752405904,34.6298087263541,25.0301659940437,40.4601925437429,34.5809373317621,29.2784661703844,31.3189277497023,31.9408884827808,62.6965130044204,12.4245405375755,11.9684561491866,13.7494923225455,10.8267504876523,8.90607275701835,15.8632718451837,11.4753825039407,17.5625269257446,11.7817026335893,9.31968561153276,28.8528826284011,25.138567024265,22.0246351422833,39.1401814479953,29.1362296052895,26.473465216802,30.6700484366229,30.4931884713563,28.2408904440797,29.0601793528367,35.7405812845238,31.6892253528608,35.3028483161457,33.8693056221759,36.52895825577,25.719859329286,31.7523053088904,29.5151107309469,27.6097553538215,35.6221386725242,30.1724942099166,38.6897257427356,31.7120132629937,40.4063038237873,35.855673938241,34.1843015882373,30.548971469753,36.0405504669845,33.5436161199279,42.6468126459881,29.8960245672919,30.240876089298,27.4184798923692,32.3817998078669,33.3728436997375,10.9916654292696,38.8326470019378,36.3132081341624,37.875089749631,31.7651643532102,41.5043425760554
|short_description=p1@Stag2
}}

Revision as of 06:57, 6 August 2015

Short description:p1@Stag2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Stag2_5end
Coexpression cluster:MCL_coexpression_mm9:1162
Association with transcript: 0bp_to_ENSMUST00000069619, NM_021465, uc009taz.1_5end
EntrezGene:20843
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Stag2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I542.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I631.39
CD326+ enterocyte, pool1.CNhs13542.11848-124I354.14
CD326+ enterocyte, pool2.CNhs13197.11849-124I450.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.06
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E961.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E784.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F289.18
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E624.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F127.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E477.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E871.42
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A144.30
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A366.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A573.45
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A251.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A452.79
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A648.38
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H235.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I936.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D146.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D237.39
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I126.28
GP2+ M cell, pool3.CNhs13240.11847-124I231.67
Ileum epithelium, pool1.CNhs13199.10252-104B964.42
Ileum epithelium, pool2.CNhs13232.10253-104C156.20
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G615.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F638.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F732.87
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8160.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1110.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3178.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9173.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2173.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4176.24
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.97
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B331.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.61
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A252.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I974.71
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A158.48
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C134.47
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E137.54
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C521.14
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.57
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.21
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.22
Mouse Schwann, donor1.CNhs12507.11728-123D933.17
Mouse Schwann, donor2.CNhs12573.11746-123F935.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G351.89
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F727.53
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C835.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F437.69
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I735.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.79
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G216.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B640.54
accessory axillary lymph node, adult.CNhs10475.1063-29H9105.13
adrenal gland, adult.CNhs10508.49-24D724.79
adrenal gland, embryo E14.CNhs11038.406-44C518.56
adrenal gland, embryo E16.CNhs11004.1254-43D624.36
adrenal gland, embryo E17.CNhs11043.1263-45I123.75
adrenal gland, embryo E18.CNhs11026.1262-18F528.03
adrenal gland, neonate N00.CNhs11191.1311-23C133.98
adrenal gland, neonate N25.CNhs11223.1377-27I321.87
amnion, adult pregnant day17.5.CNhs10488.583-22A836.34
aorta, adult.CNhs10498.46-23H136.87
bone (os femoris), adult.CNhs10483.56-12G262.81
bone (os femoris), neonate N02.CNhs11227.1985-43F541.41
bone (os femoris), neonate N16.CNhs11225.1525-43A645.05
bone (os femoris), neonate N20.CNhs11195.1350-25C345.09
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B233.67
cerebellum, neonate N30.CNhs11135.1395-42I234.56
colon, adult.CNhs10468.36-18H753.65
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D435.20
corpora quadrigemina, adult.CNhs10501.16-22A415.43
corpus striatum, adult.CNhs10487.19-21D816.47
corpus striatum, neonate N00.CNhs11226.630-43F112.31
cortex, adult.CNhs10473.12-14D513.91
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F214.55
diencephalon, neonate N30.CNhs11201.1388-42B214.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.38
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A241.80
epididymis, adult.CNhs10490.58-23B215.92
eyeball, adult.CNhs10484.31-12G448.40
eyeball, embryo E12.CNhs11016.345-16C625.11
eyeball, embryo E14.CNhs10521.399-16E219.77
eyeball, embryo E15.CNhs10593.426-16C930.43
eyeball, embryo E17.CNhs11023.1261-18D437.68
eyeball, neonate N00.CNhs11207.633-15C631.84
eyeball, neonate N01.CNhs11140.1532-43E730.36
eyeball, neonate N02.CNhs11205.1551-44G824.18
eyeball, neonate N16.CNhs11188.777-19A246.31
forelimb, embryo E11.CNhs10596.335-25E215.95
forelimb, embryo E12.CNhs10600.359-14H228.37
forelimb, embryo E13.CNhs10589.384-1E228.15
forelimb, embryo E14.CNhs10577.413-26A824.11
forelimb, embryo E15.CNhs11007.437-20E738.37
forelimb, embryo E17.CNhs10598.1517-43C454.68
forelimb, embryo E18.CNhs11008.1520-43B559.06
gonad, embryo E13.CNhs11044.1564-45I625.87
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C824.58
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D231.14
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.72
heart, embryo E11.CNhs10586.331-24E931.28
heart, embryo E12.CNhs11015.353-12F531.43
heart, embryo E13.CNhs11013.376-3I931.51
heart, embryo E14.CNhs10597.403-26D433.38
heart, embryo E15.CNhs11017.431-16C841.12
heart, embryo E16.CNhs11021.457-17C632.24
heart, embryo E17.CNhs11025.479-18E535.81
heart, embryo E18.CNhs11030.1283-20G328.97
heart, neonate N00.CNhs11213.639-21E339.12
heart, neonate N03.CNhs11221.1349-25I225.51
heart, neonate N10.CNhs11118.749-24G133.16
heart, neonate N16.CNhs11209.782-15G129.43
heart, neonate N20.CNhs11127.821-26I619.88
heart, neonate N25.CNhs11196.1351-25D318.44
heart, neonate N30.CNhs11202.1390-42D224.69
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G115.44
intestinal mucosa, adult.CNhs10506.860-29I390.20
intestine, adult.CNhs10496.178-9A342.58
intestine, embryo E12.CNhs11019.1251-16I527.94
intestine, embryo E13.CNhs11010.381-16D534.60
intestine, embryo E15.CNhs10602.976-16D832.47
intestine, embryo E16.CNhs10585.463-22H436.91
intestine, embryo E17.CNhs10582.482-18D325.80
intestine, embryo E18.CNhs10526.1289-20F726.63
intestine, neonate N00.CNhs11126.644-26D146.03
intestine, neonate N01.CNhs11192.1322-23E926.02
intestine, neonate N06.CNhs11102.688-20B829.66
intestine, neonate N07.CNhs11095.720-20F233.23
intestine, neonate N10.CNhs11098.755-23A526.32
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E349.50
intestine, neonate N30.CNhs11131.1384-42G164.32
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F828.90
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I231.77
kidney, embryo E18.CNhs11001.1288-20C733.94
kidney, neonate N00.CNhs11214.646-21G730.02
kidney, neonate N10.CNhs11206.758-6D529.15
kidney, neonate N20.CNhs11113.832-19I131.29
kidney, neonate N25.CNhs11122.1353-25F327.79
kidney, neonate N30.CNhs11203.1385-42H127.76
liver, adult pregnant day01.CNhs10466.508-5B236.17
liver, embryo E12.CNhs10601.355-15F854.39
liver, embryo E13.CNhs10524.378-3H648.55
liver, embryo E14.CNhs10594.409-16E158.24
liver, embryo E15.CNhs10520.433-16D765.73
liver, embryo E16.CNhs10523.462-17F564.64
liver, embryo E17.CNhs10510.481-18A356.78
liver, embryo E18.CNhs10579.499-43G465.88
liver, neonate N00.CNhs11117.641-24F460.64
liver, neonate N03.CNhs11123.1345-25G242.83
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H245.77
liver, neonate N10.CNhs11115.751-24B931.52
liver, neonate N20.CNhs11220.823-25A334.10
liver, neonate N25.CNhs11198.1368-26H138.39
liver, neonate N30.CNhs11106.1382-42D143.42
lung, adult.CNhs10474.28-22B150.44
lung, embryo E12.CNhs10522.354-16G224.44
lung, embryo E14.CNhs10604.404-26F834.06
lung, embryo E15.CNhs11020.432-17C532.08
lung, embryo E16.CNhs10998.458-17B640.13
lung, embryo E17.CNhs10605.480-44A652.93
lung, embryo E18.CNhs10583.1287-20I652.37
lung, neonate N00.CNhs11224.640-42C640.78
lung, neonate N06.CNhs11212.683-20E549.50
lung, neonate N07.CNhs11111.715-19A343.63
lung, neonate N10.CNhs11219.750-23E636.83
lung, neonate N20.CNhs11109.822-18A453.91
lung, neonate N25.CNhs11119.1359-25C744.21
lung, neonate N30.CNhs11133.1394-42H249.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B628.52
mammary gland, adult pregnant day19.CNhs10476.588-5H235.04
medulla oblongata, adult.CNhs10477.17-12C217.50
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C732.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C233.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.50
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E323.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D723.90
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D822.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D928.31
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D426.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.96
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.07
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I738.47
ovary, embryo E18.CNhs11040.505-44H714.07
ovary, neonate N00.CNhs11217.1299-22I437.14
oviduct, adult pregnant day01.CNhs10500.988-6G637.12
pancreas, adult.CNhs10486.34-16E430.53
pancreas, embryo E14.CNhs11012.405-44F423.55
pancreas, embryo E15.CNhs11042.1556-45F223.58
pancreas, embryo E16.CNhs11003.460-26E528.67
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I729.51
pancreas, neonate N00.CNhs11105.645-26G927.91
pancreas, neonate N01.CNhs11138.1531-43D734.17
pancreas, neonate N02.CNhs11139.1539-43D830.30
pancreas, neonate N16.CNhs11136.787-43B636.66
pancreas, neonate N25.CNhs11094.1555-45E228.46
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G838.81
pituitary gland, embryo E12.CNhs11018.346-16E629.89
pituitary gland, embryo E13.CNhs11009.370-44C75.56
pituitary gland, embryo E14.CNhs11037.398-44A523.58
pituitary gland, embryo E15.CNhs10592.427-16B931.57
pituitary gland, embryo E16.CNhs11036.449-43F626.22
pituitary gland, embryo E17.CNhs11039.1265-44F526.99
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I729.33
placenta, adult pregnant day17.CNhs10464.577-18G337.28
prostate, adult.CNhs10470.859-1F857.78
skin, adult.CNhs10492.30-1C347.82
skin, neonate N00.CNhs11124.650-25G472.01
skin, neonate N03.CNhs11215.662-22H351.75
skin, neonate N06.CNhs11097.693-20I555.39
skin, neonate N10.CNhs11108.762-6C460.08
small intestine, neonate N16.CNhs11114.790-21I149.26
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G255.53
spleen, embryo E16.CNhs11035.461-43C126.00
spleen, embryo E18.CNhs11011.1271-21F255.37
spleen, neonate N10.CNhs11116.752-24D165.18
spleen, neonate N20.CNhs11112.824-19H170.67
spleen, neonate N25.CNhs11099.1354-25G355.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C630.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D336.90
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E326.89
stomach, embryo E15.CNhs10603.1252-16G828.26
stomach, embryo E16.CNhs11022.459-17D437.26
stomach, embryo E17.CNhs11006.1035-18D531.57
stomach, embryo E18.CNhs10999.1286-20C631.88
stomach, neonate N03.CNhs11193.1340-24B832.91
stomach, neonate N07.CNhs11210.718-18A938.60
stomach, neonate N25.CNhs11104.1355-25E437.43
stomach, neonate N30.CNhs11134.1386-42I150.29
submandibular gland, adult.CNhs10469.59-29C150.33
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F530.05
testis, embryo E15.CNhs11034.443-27C521.18
testis, embryo E16.CNhs11033.470-26G527.42
testis, embryo E17.CNhs11029.486-18I528.03
testis, embryo E18.CNhs11027.503-18G538.86
testis, neonate N00.CNhs11189.1300-22B742.37
testis, neonate N07.CNhs11222.726-26I422.13
testis, neonate N10.CNhs11204.763-44D917.20
testis, neonate N20.CNhs11110.839-18H38.70
testis, neonate N30.CNhs11130.1391-42E210.66
thymus, adult.CNhs10471.38-12B550.56
thymus, embryo E14.CNhs11041.402-44I419.26
thymus, embryo E15.CNhs11005.430-45I228.25
thymus, embryo E16.CNhs11002.456-26C534.43
thymus, embryo E17.CNhs10581.478-18C142.25
thymus, embryo E18.CNhs10595.1273-19G439.54
thymus, neonate N02.CNhs11181.1541-43F840.03
thymus, neonate N03.CNhs11137.2104-43C744.01
thymus, neonate N06.CNhs11197.681-26C450.18
thymus, neonate N07.CNhs11211.713-19D339.55
thymus, neonate N10.CNhs11194.748-24E445.37
thymus, neonate N20.CNhs11186.820-7A248.83
thymus, neonate N25.CNhs11125.1362-25G746.28
thymus, neonate N30.CNhs11132.1393-42G249.91
tongue, adult.CNhs10499.32-1B432.65
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H334.63
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F725.03
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G540.46
urinary bladder, adult.CNhs10481.879-12E434.58
uterus, adult pregnant day19.CNhs10497.590-15F529.28
uterus, adult.CNhs10509.92-27E531.32
vagina, adult.CNhs10502.89-27D531.94
vesicular gland, adult.CNhs10491.51-27F862.70
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.97
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.83
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I828.85
whole body, embryo E12.CNhs10587.857-27C925.14
whole body, embryo E13.CNhs10512.372-23H222.02
whole body, embryo E14.5.CNhs10578.420-27D239.14
whole body, embryo E14.CNhs10519.395-14B129.14
whole body, embryo E16.CNhs10514.453-14F226.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G528.24
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G535.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G533.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G536.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G531.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G538.69
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.71
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G540.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G536.04
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.38
whole body, embryo E17.5.CNhs10513.490-9F933.37
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B338.83
whole body, neonate N00.CNhs10525.657-19C236.31
whole body, neonate N01.CNhs10576.659-23C637.88
whole body, neonate N06.CNhs10515.692-21D131.77
whole body, neonate N10.CNhs10518.761-6B441.50





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.29e-13118
endoderm1.29e-13118
presumptive endoderm1.29e-13118
digestive system1.47e-13116
digestive tract1.47e-13116
primitive gut1.47e-13116
subdivision of digestive tract5.04e-13114
endo-epithelium1.89e-1069
foregut3.98e-1080
unilaminar epithelium5.57e-0866
gut epithelium1.52e-0755
primordium4.75e-07134
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