FFCP PHASE1:Mm9::chr5:135565754..135565766,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2016|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135565754..135565766,+|id=chr5:135565754..135565766,+|ontology_enrichment_celltype=CL:0002563!6.36e-11!9;CL:0002251!6.36e-11!9;CL:0000066!1.38e-10!25;CL:0000223!1.61e-09!20;CL:0000239!1.53e-07!6;CL:0000677!1.53e-07!6;CL:0000212!1.53e-07!6;CL:0000584!1.53e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,3.60e-17,9;CL:0002251,3.60e-17,9;CL:0000066,9.62e-17,25;CL:0000223,1.92e-14,20;CL:0000239,1.54e-11,6;CL:0000677,1.54e-11,6;CL:0000584,1.54e-11,6;CL:0000075,9.05e-10,7;CL:0002076,1.64e-09,15;CL:0002250,3.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.17e-14!15;UBERON:0000160!7.89e-14!43;UBERON:0001242!2.79e-12!13;UBERON:0000060!2.79e-12!13;UBERON:0001262!2.79e-12!13;UBERON:0004786!2.79e-12!13;UBERON:0003350!6.36e-11!9;UBERON:0004808!6.36e-11!9;UBERON:0001277!6.36e-11!9;UBERON:0005409!7.44e-10!59;UBERON:0001007!1.44e-08!128;UBERON:0001555!1.44e-08!128;UBERON:0007026!1.44e-08!128;UBERON:0000485!1.97e-08!11;UBERON:0004119!3.18e-08!130;UBERON:0000925!3.18e-08!130;UBERON:0006595!3.18e-08!130;UBERON:0004921!1.25e-07!126;UBERON:0004185!1.25e-07!126;UBERON:0004923!4.73e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.17e-29,31;UBERON:0000344,1.03e-22,15;UBERON:0001242,8.15e-20,13;UBERON:0001262,8.15e-20,13;UBERON:0004786,8.15e-20,13;UBERON:0005409,3.11e-17,47;UBERON:0003350,3.60e-17,9;UBERON:0004808,3.60e-17,9;UBERON:0001277,3.60e-17,9;UBERON:0000485,1.10e-13,11;UBERON:0004923,7.40e-13,24;UBERON:0001007,1.08e-11,116;UBERON:0001555,1.08e-11,116;UBERON:0007026,1.08e-11,116;UBERON:0004119,2.36e-11,118;UBERON:0000925,2.36e-11,118;UBERON:0006595,2.36e-11,118;UBERON:0004921,3.25e-10,114|phase1_expression=0,6.97950815278722,7.73498706962211,64.7273412196616,68.1218192727032,4.36486106970913,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,3.03985603307473,3.44113921600755,2.8711598205751,4.73838195774982,5.17130958446134,2.66032787238923,1.51218077855958,0,0,0,0,17.3310971850765,21.278034605887,26.1336776015832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,5.16254326188832,4.75979933595425,11.3337670243942,19.4932925234301,11.6486990645307,2.94933282276679,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0.258937883647172,1.92974780784272,0,0,0,0,0,11.8126595849895,0,29.6428681685819,0,0,0,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41505126820156,0.134206418760372,0,0,54.5190991923267,12.4291766331866,0,0,0,0.201683524623343,0,0.760902504450237,24.2009821387701,3.45867804920423,5.7807098024062,7.75930240960488,8.38345574612217,19.7740269903929,28.3140845335849,26.8840718893396,0,0,0,0.203651327845314,0,0.210407459670956,0.569128834118316,0.147610147979602,1.72698600625512,3.57851775373222,16.6013471168803,0,0,0,0,0,0,0,0,0.274561413188081,0,2.97712758134803,0.312037673114561,0.757736633841335,3.58794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,2.59027472798843,0,0,0,1.96705709207614,1.10374698521893,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0.38581844092741,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0,1.28922632428979,0,0,0|short_description=p@chr5:135565754..135565766,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2016 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:135565754..135565766,+ | |||
|description=CAGE_peak_at_chr5:135565754..135565766,+ | |||
|id=chr5:135565754..135565766,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.36e-11!9;CL:0002251!6.36e-11!9;CL:0000066!1.38e-10!25;CL:0000223!1.61e-09!20;CL:0000239!1.53e-07!6;CL:0000677!1.53e-07!6;CL:0000212!1.53e-07!6;CL:0000584!1.53e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.60e-17,9;CL:0002251,3.60e-17,9;CL:0000066,9.62e-17,25;CL:0000223,1.92e-14,20;CL:0000239,1.54e-11,6;CL:0000677,1.54e-11,6;CL:0000584,1.54e-11,6;CL:0000075,9.05e-10,7;CL:0002076,1.64e-09,15;CL:0002250,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.17e-14!15;UBERON:0000160!7.89e-14!43;UBERON:0001242!2.79e-12!13;UBERON:0000060!2.79e-12!13;UBERON:0001262!2.79e-12!13;UBERON:0004786!2.79e-12!13;UBERON:0003350!6.36e-11!9;UBERON:0004808!6.36e-11!9;UBERON:0001277!6.36e-11!9;UBERON:0005409!7.44e-10!59;UBERON:0001007!1.44e-08!128;UBERON:0001555!1.44e-08!128;UBERON:0007026!1.44e-08!128;UBERON:0000485!1.97e-08!11;UBERON:0004119!3.18e-08!130;UBERON:0000925!3.18e-08!130;UBERON:0006595!3.18e-08!130;UBERON:0004921!1.25e-07!126;UBERON:0004185!1.25e-07!126;UBERON:0004923!4.73e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.17e-29,31;UBERON:0000344,1.03e-22,15;UBERON:0001242,8.15e-20,13;UBERON:0001262,8.15e-20,13;UBERON:0004786,8.15e-20,13;UBERON:0005409,3.11e-17,47;UBERON:0003350,3.60e-17,9;UBERON:0004808,3.60e-17,9;UBERON:0001277,3.60e-17,9;UBERON:0000485,1.10e-13,11;UBERON:0004923,7.40e-13,24;UBERON:0001007,1.08e-11,116;UBERON:0001555,1.08e-11,116;UBERON:0007026,1.08e-11,116;UBERON:0004119,2.36e-11,118;UBERON:0000925,2.36e-11,118;UBERON:0006595,2.36e-11,118;UBERON:0004921,3.25e-10,114 | |||
|phase1_expression=0,6.97950815278722,7.73498706962211,64.7273412196616,68.1218192727032,4.36486106970913,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,3.03985603307473,3.44113921600755,2.8711598205751,4.73838195774982,5.17130958446134,2.66032787238923,1.51218077855958,0,0,0,0,17.3310971850765,21.278034605887,26.1336776015832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,5.16254326188832,4.75979933595425,11.3337670243942,19.4932925234301,11.6486990645307,2.94933282276679,0,0,0,0,0,0,0,0,0,0,6.16592950482924,0.258937883647172,1.92974780784272,0,0,0,0,0,11.8126595849895,0,29.6428681685819,0,0,0,0,0,0,0,12.517395705221,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41505126820156,0.134206418760372,0,0,54.5190991923267,12.4291766331866,0,0,0,0.201683524623343,0,0.760902504450237,24.2009821387701,3.45867804920423,5.7807098024062,7.75930240960488,8.38345574612217,19.7740269903929,28.3140845335849,26.8840718893396,0,0,0,0.203651327845314,0,0.210407459670956,0.569128834118316,0.147610147979602,1.72698600625512,3.57851775373222,16.6013471168803,0,0,0,0,0,0,0,0,0.274561413188081,0,2.97712758134803,0.312037673114561,0.757736633841335,3.58794827043824,0,0,0,0,0,0,0,0,0,0,0,0,0.491589944147214,2.59027472798843,0,0,0,1.96705709207614,1.10374698521893,0,0,0,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,11.659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0,0,0,0.187283014939765,0.192075457214608,0,0,0.231768651889711,0.38581844092741,0.824171801606613,0,0.342869252385415,0.177475806159338,0,0.290692833264657,0.188218760830661,0.169229215783353,0.365855945745545,0,0,0,0,0.197008964751127,0,0.309873682371932,0.192906610981141,0,0,1.28922632428979,0,0,0 | |||
|short_description=p@chr5:135565754..135565766,+ | |||
}} |
Latest revision as of 10:09, 6 August 2015
Short description: | p@chr5:135565754..135565766, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135565754..135565766, + |
Coexpression cluster: | MCL_coexpression_mm9:2016 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.60e-17 | 9 |
epithelial cell of alimentary canal | 3.60e-17 | 9 |
epithelial cell | 9.62e-17 | 25 |
endodermal cell | 1.92e-14 | 20 |
brush border epithelial cell | 1.54e-11 | 6 |
gut absorptive cell | 1.54e-11 | 6 |
enterocyte | 1.54e-11 | 6 |
columnar/cuboidal epithelial cell | 9.05e-10 | 7 |
endo-epithelial cell | 1.64e-09 | 15 |
intestinal crypt stem cell | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.17e-29 | 31 |
mucosa | 1.03e-22 | 15 |
intestinal mucosa | 8.15e-20 | 13 |
wall of intestine | 8.15e-20 | 13 |
gastrointestinal system mucosa | 8.15e-20 | 13 |
gastrointestinal system | 3.11e-17 | 47 |
epithelium of mucosa | 3.60e-17 | 9 |
gastrointestinal system epithelium | 3.60e-17 | 9 |
intestinal epithelium | 3.60e-17 | 9 |
simple columnar epithelium | 1.10e-13 | 11 |
organ component layer | 7.40e-13 | 24 |
digestive system | 1.08e-11 | 116 |
digestive tract | 1.08e-11 | 116 |
primitive gut | 1.08e-11 | 116 |
endoderm-derived structure | 2.36e-11 | 118 |
endoderm | 2.36e-11 | 118 |
presumptive endoderm | 2.36e-11 | 118 |
subdivision of digestive tract | 3.25e-10 | 114 |