FFCP PHASE2:Hg19::chr6:152489484..152489497,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23345 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17089 |TSScla...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17089 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8WAI0 | ||
|association_with_transcript=0bp_to_ENST00000354674_5end | |association_with_transcript=0bp_to_ENST00000354674_5end | ||
|cluster_id=chr6:152489484..152489497,- | |cluster_id=chr6:152489484..152489497,- |
Latest revision as of 06:16, 16 September 2015
Short description: | p42@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_42_at_SYNE1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000354674_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | F8WAI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p42@SYNE1 |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 5.93e-26 | 1 |
cardiac atrium | 1.07e-13 | 2 |
future cardiac atrium | 1.07e-13 | 2 |
pineal body | 1.21e-13 | 2 |
regional part of epithalamus | 1.21e-13 | 2 |
secretory circumventricular organ | 1.21e-13 | 2 |
circumventricular organ | 1.21e-13 | 2 |
epithalamus | 1.21e-13 | 2 |
sense organ | 5.07e-10 | 24 |
sensory system | 5.07e-10 | 24 |
Showing 1 to 10 of 18 entries