FFCP PHASE1:Hg19::chr1:25291475..25291511,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10473 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B1AJV5,Q13761 | ||
|association_with_transcript=0bp_to_ENST00000338888,ENST00000399916,NM_001031680,uc001bjr.2,uc009vrj.2,uc009vrk.2_5end | |association_with_transcript=0bp_to_ENST00000338888,ENST00000399916,NM_001031680,uc001bjr.2,uc009vrj.2,uc009vrk.2_5end | ||
|cluster_id=chr1:25291475..25291511,- | |cluster_id=chr1:25291475..25291511,- | ||
Latest revision as of 02:41, 17 September 2015
| Short description: | p2@RUNX3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RUNX3_5end |
| Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
| Association with transcript: | 0bp_to_ENST00000338888, ENST00000399916, NM_001031680, uc001bjr.2, uc009vrj.2, uc009vrk.2_5end |
| EntrezGene: | RUNX3 |
| HGNC: | 10473 |
| UniProt: | B1AJV5Q13761 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@RUNX3 |
|---|
0
25
50
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125
150
175
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 5.18e-45 | 177 |
| hematopoietic stem cell | 5.41e-45 | 168 |
| hematopoietic oligopotent progenitor cell | 7.60e-42 | 161 |
| hematopoietic multipotent progenitor cell | 7.60e-42 | 161 |
| leukocyte | 3.79e-40 | 136 |
| nongranular leukocyte | 6.08e-30 | 115 |
| hematopoietic lineage restricted progenitor cell | 5.18e-29 | 120 |
| myeloid cell | 7.09e-23 | 108 |
| common myeloid progenitor | 7.09e-23 | 108 |
| lymphocyte | 1.23e-17 | 53 |
Showing 1 to 10 of 39 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 5.84e-24 | 98 |
| blood island | 5.84e-24 | 98 |
| hemolymphoid system | 3.73e-22 | 108 |
| immune system | 3.69e-16 | 93 |
| bone element | 3.20e-15 | 82 |
| connective tissue | 4.25e-14 | 371 |
| skeletal element | 2.39e-13 | 90 |
| bone marrow | 5.78e-13 | 76 |
| skeletal system | 3.63e-12 | 100 |
| hemopoietic organ | 2.36e-08 | 7 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 9.03e-12 | 51 |
| immune system cancer | 9.03e-12 | 51 |
| leukemia | 6.44e-10 | 39 |
| myeloid leukemia | 9.38e-08 | 31 |
Showing 1 to 4 of 4 entries
