FFCP PHASE2:Hg19::chr19:31840313..31840380,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:57616 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30700 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30700 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q63HK5 | ||
|association_with_transcript=72bp_to_ENST00000240587_5end | |association_with_transcript=72bp_to_ENST00000240587_5end | ||
|cluster_id=chr19:31840313..31840380,- | |cluster_id=chr19:31840313..31840380,- | ||
Latest revision as of 05:12, 17 September 2015
| Short description: | p1@TSHZ3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TSHZ3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 72bp_to_ENST00000240587_5end |
| EntrezGene: | TSHZ3 |
| HGNC: | 30700 |
| UniProt: | Q63HK5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TSHZ3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fibroblast | 2.87e-15 | 76 |
| muscle precursor cell | 2.68e-11 | 58 |
| myoblast | 2.68e-11 | 58 |
| multi-potent skeletal muscle stem cell | 2.68e-11 | 58 |
| muscle cell | 8.99e-11 | 55 |
| multi fate stem cell | 2.03e-10 | 427 |
| somatic stem cell | 2.60e-10 | 433 |
| stem cell | 1.40e-09 | 441 |
| electrically responsive cell | 1.72e-09 | 61 |
| electrically active cell | 1.72e-09 | 61 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| dense mesenchyme tissue | 6.82e-13 | 73 |
| mesoderm | 6.89e-13 | 315 |
| mesoderm-derived structure | 6.89e-13 | 315 |
| presumptive mesoderm | 6.89e-13 | 315 |
| musculoskeletal system | 8.57e-13 | 167 |
| paraxial mesoderm | 9.13e-13 | 72 |
| presumptive paraxial mesoderm | 9.13e-13 | 72 |
| somite | 1.34e-12 | 71 |
| presomitic mesoderm | 1.34e-12 | 71 |
| presumptive segmental plate | 1.34e-12 | 71 |
Showing 1 to 10 of 31 entries
