FFCP PHASE2:Hg19::chr7:152373182..152373198,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7516 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:12829 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=12829 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O43543 | ||
|association_with_transcript=51bp_to_ENST00000359321,NM_005431,uc003wld.2_5end | |association_with_transcript=51bp_to_ENST00000359321,NM_005431,uc003wld.2_5end | ||
|cluster_id=chr7:152373182..152373198,- | |cluster_id=chr7:152373182..152373198,- | ||
Latest revision as of 08:07, 17 September 2015
| Short description: | p2@XRCC2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_XRCC2_5end |
| Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
| Association with transcript: | 51bp_to_ENST00000359321, NM_005431, uc003wld.2_5end |
| EntrezGene: | XRCC2 |
| HGNC: | 12829 |
| UniProt: | O43543 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@XRCC2 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 5.23e-08 | 253 |
| neural cell | 3.57e-07 | 25 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 1.80e-52 | 235 |
| disease of cellular proliferation | 3.00e-50 | 239 |
| cell type cancer | 1.70e-29 | 143 |
| organ system cancer | 1.76e-24 | 137 |
| carcinoma | 3.66e-22 | 106 |
| hematologic cancer | 4.76e-20 | 51 |
| immune system cancer | 4.76e-20 | 51 |
| leukemia | 1.03e-15 | 39 |
| myeloid leukemia | 1.36e-11 | 31 |
| germ cell and embryonal cancer | 9.45e-10 | 22 |
Showing 1 to 10 of 13 entries
