FFCP PHASE2:Hg19::chr8:21924000..21924036,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2039 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:3382 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3382 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 09:54, 17 September 2015
Short description: | p4@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EPB49_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000519333, ENST00000522340_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@EPB49 |
---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.94e-25 | 24 |
endothelial cell | 1.03e-22 | 36 |
meso-epithelial cell | 5.25e-19 | 45 |
blood vessel endothelial cell | 6.88e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.88e-19 | 18 |
lining cell | 5.82e-12 | 58 |
barrier cell | 5.82e-12 | 58 |
mesodermal cell | 1.28e-10 | 121 |
endothelial cell of artery | 4.48e-10 | 9 |
epithelial cell of nephron | 4.69e-09 | 15 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 5.21e-46 | 240 |
tube | 4.56e-45 | 192 |
adult organism | 5.19e-39 | 114 |
epithelial tube | 1.84e-28 | 117 |
vessel | 5.28e-28 | 68 |
epithelium | 3.39e-26 | 306 |
cell layer | 1.83e-25 | 309 |
epithelial tube open at both ends | 7.93e-25 | 59 |
blood vessel | 7.93e-25 | 59 |
blood vasculature | 7.93e-25 | 59 |
Showing 1 to 10 of 80 entries