FFCP PHASE2:Hg19::chr6:31540488..31540521,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4049 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:6709 |TSSclassifier=strong ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=6709 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 21:11, 17 September 2015
| Short description: | p2@LTA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_LTA_5end |
| Coexpression cluster: | C205_mycosis_cord_hairy_xeroderma_CD4_B_b |
| Association with transcript: | -183bp_to_uc003nuf.2, uc003nug.2, uc003nuh.2, uc010jsr.2_5end |
| EntrezGene: | LTA |
| HGNC: | 6709 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@LTA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte of B lineage | 8.09e-32 | 24 |
| pro-B cell | 8.09e-32 | 24 |
| lymphoid lineage restricted progenitor cell | 8.04e-28 | 52 |
| lymphocyte | 3.16e-27 | 53 |
| common lymphoid progenitor | 3.16e-27 | 53 |
| nongranular leukocyte | 6.54e-12 | 115 |
| hematopoietic lineage restricted progenitor cell | 2.92e-11 | 120 |
| leukocyte | 9.13e-11 | 136 |
| hematopoietic cell | 9.78e-11 | 177 |
| hematopoietic oligopotent progenitor cell | 1.72e-08 | 161 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| lymphoma | 3.24e-14 | 10 |
| non-Hodgkin lymphoma | 2.09e-07 | 1 |
| cutaneous T cell lymphoma | 2.09e-07 | 1 |
| mycosis fungoides | 2.09e-07 | 1 |
| genetic disease | 2.50e-07 | 1 |
| monogenic disease | 2.50e-07 | 1 |
| xeroderma pigmentosum | 2.50e-07 | 1 |
| anemia | 3.57e-07 | 1 |
Showing 1 to 8 of 8 entries
