FFCP PHASE2:Hg19::chr1:40627038..40627071,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6018 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10025 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6018 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10025 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13129 | ||
|association_with_transcript=0bp_to_ENST00000372771,NM_012421,uc001cfc.3_5end | |association_with_transcript=0bp_to_ENST00000372771,NM_012421,uc001cfc.3_5end | ||
|cluster_id=chr1:40627038..40627071,+ | |cluster_id=chr1:40627038..40627071,+ |
Latest revision as of 00:50, 18 September 2015
Short description: | p1@RLF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RLF_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000372771, NM_012421, uc001cfc.3_5end |
EntrezGene: | RLF |
HGNC: | 10025 |
UniProt: | Q13129 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@RLF |
---|
0
50
100
150
200
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.14e-40 | 136 |
hematopoietic stem cell | 6.50e-38 | 168 |
hematopoietic oligopotent progenitor cell | 6.04e-35 | 161 |
hematopoietic multipotent progenitor cell | 6.04e-35 | 161 |
hematopoietic cell | 5.81e-34 | 177 |
hematopoietic lineage restricted progenitor cell | 1.52e-32 | 120 |
nongranular leukocyte | 9.10e-30 | 115 |
myeloid leukocyte | 1.60e-26 | 72 |
myeloid cell | 2.21e-24 | 108 |
common myeloid progenitor | 2.21e-24 | 108 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.61e-21 | 98 |
blood island | 5.61e-21 | 98 |
hemolymphoid system | 1.11e-17 | 108 |
bone marrow | 1.99e-17 | 76 |
bone element | 2.50e-17 | 82 |
immune system | 2.72e-15 | 93 |
adult organism | 3.64e-15 | 114 |
skeletal element | 2.92e-14 | 90 |
skeletal system | 3.52e-11 | 100 |
neural tube | 1.12e-09 | 56 |
Showing 1 to 10 of 25 entries