FFCP PHASE2:Hg19::chr6:33043729..33043782,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3115 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4940 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4940 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A2BEU2,E7EQF5,F5H135,P04440 | ||
|association_with_transcript=0bp_to_ENST00000411942,ENST00000422592,ENST00000535465,uc003ocu.1,uc011dqn.1,uc011dqo.1,uc011dqp.1_5end | |association_with_transcript=0bp_to_ENST00000411942,ENST00000422592,ENST00000535465,uc003ocu.1,uc011dqn.1,uc011dqo.1,uc011dqp.1_5end | ||
|cluster_id=chr6:33043729..33043782,+ | |cluster_id=chr6:33043729..33043782,+ | ||
Latest revision as of 05:35, 18 September 2015
| Short description: | p1@HLA-DPB1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_HLA-DPB1_5end |
| Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
| Association with transcript: | 0bp_to_ENST00000411942, ENST00000422592, ENST00000535465, uc003ocu.1, uc011dqn.1, uc011dqo.1, uc011dqp.1_5end |
| EntrezGene: | HLA-DPB1 |
| HGNC: | 4940 |
| UniProt: | A2BEU2E7EQF5F5H135P04440 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HLA-DPB1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 7.40e-65 | 136 |
| nongranular leukocyte | 5.09e-60 | 115 |
| hematopoietic stem cell | 6.14e-58 | 168 |
| hematopoietic lineage restricted progenitor cell | 2.45e-56 | 120 |
| hematopoietic cell | 2.85e-55 | 177 |
| hematopoietic oligopotent progenitor cell | 2.08e-54 | 161 |
| hematopoietic multipotent progenitor cell | 2.08e-54 | 161 |
| macrophage dendritic cell progenitor | 2.63e-37 | 61 |
| monopoietic cell | 1.49e-35 | 59 |
| monocyte | 1.49e-35 | 59 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 4.96e-45 | 98 |
| blood island | 4.96e-45 | 98 |
| hemolymphoid system | 1.09e-39 | 108 |
| adult organism | 3.22e-35 | 114 |
| bone marrow | 4.11e-33 | 76 |
| immune system | 3.57e-31 | 93 |
| bone element | 2.44e-28 | 82 |
| skeletal element | 4.36e-23 | 90 |
| skeletal system | 3.90e-19 | 100 |
| lateral plate mesoderm | 4.11e-11 | 203 |
Showing 1 to 10 of 23 entries
