FFCP PHASE2:Hg19::chr18:12657964..12657987,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:56907 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30622 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=56907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30622 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q08AE8 | ||
|association_with_transcript=-52bp_to_ENST00000383356,NM_001128626,NM_020148,uc002kre.2,uc010wzy.1_5end | |association_with_transcript=-52bp_to_ENST00000383356,NM_001128626,NM_020148,uc002kre.2,uc010wzy.1_5end | ||
|cluster_id=chr18:12657964..12657987,- | |cluster_id=chr18:12657964..12657987,- |
Latest revision as of 19:56, 18 September 2015
Short description: | p3@SPIRE1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPIRE1_5end |
Coexpression cluster: | C3706_temporal_duodenum_occipital_Neural_mucinous_parietal_Neurons |
Association with transcript: | -52bp_to_ENST00000383356, NM_001128626, NM_020148, uc002kre.2, uc010wzy.1_5end |
EntrezGene: | SPIRE1 |
HGNC: | 30622 |
UniProt: | Q08AE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@SPIRE1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 1.62e-24 | 56 |
neural rod | 1.62e-24 | 56 |
future spinal cord | 1.62e-24 | 56 |
neural keel | 1.62e-24 | 56 |
regional part of nervous system | 8.32e-23 | 53 |
regional part of brain | 8.32e-23 | 53 |
brain | 8.27e-21 | 68 |
future brain | 8.27e-21 | 68 |
central nervous system | 2.24e-20 | 81 |
nervous system | 2.80e-20 | 89 |
Showing 1 to 10 of 47 entries