FFCP PHASE2:Hg19::chr2:200322213..200322224,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:23314 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:21637 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=23314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21637 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8WCV6 | ||
|association_with_transcript=110bp_to_ENST00000440919_5end | |association_with_transcript=110bp_to_ENST00000440919_5end | ||
|cluster_id=chr2:200322213..200322224,- | |cluster_id=chr2:200322213..200322224,- | ||
Latest revision as of 09:08, 19 September 2015
| Short description: | p14@SATB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_SATB2_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 110bp_to_ENST00000440919_5end |
| EntrezGene: | SATB2 |
| HGNC: | 21637 |
| UniProt: | F8WCV6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p14@SATB2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 1.70e-21 | 8 |
| neuron | 1.62e-16 | 6 |
| neuroblast | 1.62e-16 | 6 |
| electrically signaling cell | 1.62e-16 | 6 |
| neural cell | 1.05e-09 | 25 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| parietal lobe | 2.17e-09 | 5 |
| central nervous system | 3.11e-09 | 81 |
| neocortex | 2.22e-08 | 20 |
| nervous system | 3.26e-08 | 89 |
| regional part of cerebral cortex | 1.15e-07 | 22 |
| cerebral cortex | 8.53e-07 | 25 |
| pallium | 8.53e-07 | 25 |
Showing 1 to 7 of 7 entries
