FFCP PHASE2:Hg19::chr14:36989940..36989957,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7080 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11825 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11825 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8VVG2 | ||
|association_with_transcript=196bp_to_ENST00000546983_5end | |association_with_transcript=196bp_to_ENST00000546983_5end | ||
|cluster_id=chr14:36989940..36989957,- | |cluster_id=chr14:36989940..36989957,- |
Latest revision as of 22:38, 19 September 2015
Short description: | p2@NKX2-1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NKX2-1_5end |
Coexpression cluster: | C3426_bronchioalveolar_anaplastic_astrocytoma_small_somatostatinoma_large_prostate |
Association with transcript: | 196bp_to_ENST00000546983_5end |
EntrezGene: | NKX2-1 |
HGNC: | 11825 |
UniProt: | F8VVG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@NKX2-1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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thyroid gland | 5.00e-16 | 5 |
pharyngeal pouch | 5.00e-16 | 5 |
thyroid diverticulum | 5.00e-16 | 5 |
pharyngeal pouch 2 | 5.00e-16 | 5 |
thyroid primordium | 5.00e-16 | 5 |
lung | 1.58e-13 | 22 |
respiratory tube | 1.58e-13 | 22 |
respiration organ | 1.58e-13 | 22 |
pair of lungs | 1.58e-13 | 22 |
lung primordium | 1.58e-13 | 22 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
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respiratory system cancer | 1.03e-07 | 16 |
Showing 1 to 1 of 1 entries