FFCP PHASE2:Hg19::chr7:91509972..91509984,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7978 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:21463 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21463 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JU79 | ||
|association_with_transcript=0bp_to_ENST00000425936_5end | |association_with_transcript=0bp_to_ENST00000425936_5end | ||
|cluster_id=chr7:91509972..91509984,- | |cluster_id=chr7:91509972..91509984,- |
Latest revision as of 23:02, 19 September 2015
Short description: | p3@MTERF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTERF_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_ENST00000425936_5end |
EntrezGene: | MTERF |
HGNC: | 21463 |
UniProt: | C9JU79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@MTERF |
---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tissue | 4.52e-50 | 2 |
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
peripheral nervous system | 2.45e-12 | 8 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 4.52e-50 | 2 |
neurofibroma | 4.52e-50 | 2 |
peripheral nervous system neoplasm | 5.96e-34 | 3 |
lung small cell carcinoma | 5.56e-26 | 4 |
neuroendocrine tumor | 9.07e-18 | 6 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
neuroectodermal tumor | 3.02e-11 | 10 |
nervous system cancer | 1.33e-09 | 11 |
Showing 1 to 10 of 12 entries