FFCP PHASE1:Hg19::chr5:125695772..125695781,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24911 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B7Z6D8,Q96HH9 | ||
|association_with_transcript=-6bp_to_NM_001146319,uc011cwt.1_5end | |association_with_transcript=-6bp_to_NM_001146319,uc011cwt.1_5end | ||
|cluster_id=chr5:125695772..125695781,+ | |cluster_id=chr5:125695772..125695781,+ | ||
Latest revision as of 00:58, 20 September 2015
| Short description: | p30@GRAMD3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_30_at_GRAMD3_5end |
| Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
| Association with transcript: | -6bp_to_NM_001146319, uc011cwt.1_5end |
| EntrezGene: | GRAMD3 |
| HGNC: | 24911 |
| UniProt: | B7Z6D8Q96HH9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p30@GRAMD3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 1.23e-66 | 3 |
| extraembryonic cell | 3.42e-11 | 19 |
| epithelial cell of pancreas | 9.63e-07 | 4 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| egg chorion | 1.23e-66 | 3 |
| chorion | 6.95e-51 | 7 |
| extraembryonic membrane | 9.22e-26 | 14 |
| membranous layer | 9.22e-26 | 14 |
| extraembryonic structure | 3.06e-15 | 24 |
| placenta | 6.50e-07 | 4 |
| allantois | 6.50e-07 | 4 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| pancreas adenocarcinoma | 3.24e-12 | 2 |
| pancreatic carcinoma | 3.24e-12 | 2 |
| pancreatic ductal adenocarcinoma | 3.24e-12 | 2 |
| pancreatic cancer | 9.63e-07 | 4 |
Showing 1 to 4 of 4 entries
