FFCP PHASE2:Hg19::chr5:125759251..125759262,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:65983 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24911 |TSScla...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=65983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24911 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=D6RFH3,D6R9P9 | ||
|association_with_transcript=87bp_to_ENST00000505720,ENST00000513978,ENST00000514099_5end | |association_with_transcript=87bp_to_ENST00000505720,ENST00000513978,ENST00000514099_5end | ||
|cluster_id=chr5:125759251..125759262,+ | |cluster_id=chr5:125759251..125759262,+ | ||
Latest revision as of 01:14, 20 September 2015
| Short description: | p13@GRAMD3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_GRAMD3_5end |
| Coexpression cluster: | C1274_Preadipocyte_Olfactory_Adipocyte_amniotic_serous_spindle_mesodermal |
| Association with transcript: | 87bp_to_ENST00000505720, ENST00000513978, ENST00000514099_5end |
| EntrezGene: | GRAMD3 |
| HGNC: | 24911 |
| UniProt: | D6RFH3D6R9P9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p13@GRAMD3 |
|---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hair follicle cell | 3.50e-16 | 5 |
| preadipocyte of the breast | 2.20e-11 | 3 |
| omentum preadipocyte | 4.44e-11 | 3 |
| hair follicle dermal papilla cell | 2.40e-10 | 3 |
| stem cell of epidermis | 2.40e-10 | 3 |
| preadipocyte | 5.90e-10 | 12 |
| receptor cell | 1.62e-09 | 6 |
| sensory epithelial cell | 1.62e-09 | 6 |
| olfactory epithelial cell | 1.62e-09 | 6 |
| adipocyte of breast | 6.02e-08 | 2 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| hair follicle | 3.50e-16 | 5 |
| hair follicle placode | 3.50e-16 | 5 |
| omentum | 1.85e-14 | 6 |
| peritoneum | 1.85e-14 | 6 |
| abdominal cavity | 1.85e-14 | 6 |
| visceral peritoneum | 1.85e-14 | 6 |
| dermal papilla | 2.40e-10 | 3 |
| papillary layer of dermis | 2.40e-10 | 3 |
| neural tube | 8.26e-10 | 56 |
| neural rod | 8.26e-10 | 56 |
Showing 1 to 10 of 35 entries
