FFCP PHASE2:Hg19::chr14:54421190..54421212,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:652 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1071 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=652 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1071 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P12644,Q53XC5 | ||
|association_with_transcript=57bp_to_ENST00000417573,NM_130851,uc010aoh.2_5end | |association_with_transcript=57bp_to_ENST00000417573,NM_130851,uc010aoh.2_5end | ||
|cluster_id=chr14:54421190..54421212,- | |cluster_id=chr14:54421190..54421212,- |
Latest revision as of 07:36, 20 September 2015
Short description: | p5@BMP4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BMP4_5end |
Coexpression cluster: | C830_Renal_Endothelial_adipose_Mast_ovary_testis_Lymphatic |
Association with transcript: | 57bp_to_ENST00000417573, NM_130851, uc010aoh.2_5end |
EntrezGene: | BMP4 |
HGNC: | 1071 |
UniProt: | P12644Q53XC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@BMP4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endothelial cell | 2.09e-46 | 36 |
endothelial cell of vascular tree | 8.36e-45 | 24 |
meso-epithelial cell | 1.27e-40 | 45 |
lining cell | 2.87e-38 | 58 |
barrier cell | 2.87e-38 | 58 |
blood vessel endothelial cell | 1.84e-31 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.84e-31 | 18 |
mesodermal cell | 2.85e-23 | 121 |
endothelial cell of artery | 2.47e-21 | 9 |
lymphangioblast | 5.37e-15 | 6 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.84e-31 | 18 |
endothelium | 1.84e-31 | 18 |
cardiovascular system endothelium | 1.84e-31 | 18 |
simple squamous epithelium | 6.16e-28 | 22 |
squamous epithelium | 7.05e-27 | 25 |
vessel | 1.10e-22 | 68 |
endothelial tube | 2.47e-21 | 9 |
arterial system endothelium | 2.47e-21 | 9 |
endothelium of artery | 2.47e-21 | 9 |
vasculature | 1.26e-18 | 78 |
Showing 1 to 10 of 37 entries