FFCP PHASE2:Hg19::chr9:124262289..124262296,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2681 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA |HGNC=HGNC:4253 |TSSclassifier=str...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2681 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC=4253 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q4G0N0 | ||
|association_with_transcript=9bp_to_ENST00000481799,NR_003191,NR_045211,uc004blj.1,uc004blk.1,uc004bll.1,uc004blm.1_5end | |association_with_transcript=9bp_to_ENST00000481799,NR_003191,NR_045211,uc004blj.1,uc004blk.1,uc004bll.1,uc004blm.1_5end | ||
|cluster_id=chr9:124262289..124262296,- | |cluster_id=chr9:124262289..124262296,- | ||
Latest revision as of 21:25, 24 September 2015
| Short description: | p9@GGTA1P |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_GGTA1P_5end |
| Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
| Association with transcript: | 9bp_to_ENST00000481799, NR_003191, NR_045211, uc004blj.1, uc004blk.1, uc004bll.1, uc004blm.1_5end |
| EntrezGene: | GGTA1P |
| HGNC: | 4253 |
| UniProt: | Q4G0N0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@GGTA1P |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| immature conventional dendritic cell | 3.16e-43 | 5 |
| common dendritic progenitor | 3.16e-43 | 5 |
| conventional dendritic cell | 3.84e-29 | 8 |
| dendritic cell | 5.23e-24 | 10 |
| monopoietic cell | 4.45e-08 | 59 |
| monocyte | 4.45e-08 | 59 |
| monoblast | 4.45e-08 | 59 |
| promonocyte | 4.45e-08 | 59 |
| macrophage dendritic cell progenitor | 7.86e-08 | 61 |
| myeloid lineage restricted progenitor cell | 2.82e-07 | 66 |
Showing 1 to 10 of 11 entries
