FFCP PHASE2:Hg19::chr4:120549834..120549846,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:8654 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8784 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8654 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8784 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O76074 | ||
|association_with_transcript=134bp_to_NM_001083,uc003idh.2_5end | |association_with_transcript=134bp_to_NM_001083,uc003idh.2_5end | ||
|cluster_id=chr4:120549834..120549846,- | |cluster_id=chr4:120549834..120549846,- | ||
Latest revision as of 22:59, 24 September 2015
| Short description: | p15@PDE5A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_15_at_PDE5A_5end |
| Coexpression cluster: | C1933_glioblastoma_small_Prostate_Smooth_rhabdomyosarcoma_normal_sacrococcigeal |
| Association with transcript: | 134bp_to_NM_001083, uc003idh.2_5end |
| EntrezGene: | PDE5A |
| HGNC: | 8784 |
| UniProt: | O76074 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p15@PDE5A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| prostate stromal cell | 4.97e-24 | 3 |
| enteric smooth muscle cell | 3.09e-23 | 3 |
| smooth muscle cell of large intestine | 3.09e-23 | 3 |
| smooth muscle cell of colon | 3.09e-23 | 3 |
| smooth muscle cell of prostate | 3.44e-16 | 2 |
| smooth muscle cell | 5.42e-10 | 43 |
| smooth muscle myoblast | 5.42e-10 | 43 |
| muscle cell | 1.42e-07 | 55 |
| muscle precursor cell | 3.98e-07 | 58 |
| myoblast | 3.98e-07 | 58 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| prostate gland | 2.08e-17 | 11 |
| male accessory sex gland | 2.08e-17 | 11 |
| embryonic cloacal epithelium | 2.08e-17 | 11 |
| epithelium of hindgut | 2.08e-17 | 11 |
| urogenital sinus epithelium | 2.08e-17 | 11 |
| prostate bud | 2.08e-17 | 11 |
| prostate field | 2.08e-17 | 11 |
| sex gland | 6.05e-16 | 12 |
| male reproductive gland | 6.05e-16 | 12 |
| hindgut | 4.80e-14 | 19 |
Showing 1 to 10 of 29 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 3.61e-22 | 3 |
| leiomyoma | 3.61e-22 | 3 |
| benign neoplasm | 8.68e-17 | 4 |
Showing 1 to 3 of 3 entries
