FFCP PHASE2:Hg19::chr5:138089159..138089176,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1495 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:2509 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2509 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E5RIC3 | ||
|association_with_transcript=18bp_to_ENST00000518245_5end | |association_with_transcript=18bp_to_ENST00000518245_5end | ||
|cluster_id=chr5:138089159..138089176,+ | |cluster_id=chr5:138089159..138089176,+ | ||
Latest revision as of 23:30, 24 September 2015
| Short description: | p2@CTNNA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CTNNA1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 18bp_to_ENST00000518245_5end |
| EntrezGene: | CTNNA1 |
| HGNC: | 2509 |
| UniProt: | E5RIC3 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CTNNA1 |
|---|
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125
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175
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.34e-43 | 253 |
| embryonic cell | 1.55e-25 | 250 |
| squamous epithelial cell | 1.52e-13 | 63 |
| mesodermal cell | 7.33e-13 | 121 |
| lining cell | 2.02e-12 | 58 |
| barrier cell | 2.02e-12 | 58 |
| endodermal cell | 1.98e-11 | 58 |
| endo-epithelial cell | 6.62e-10 | 42 |
| endothelial cell of vascular tree | 1.58e-09 | 24 |
| blood vessel endothelial cell | 5.15e-08 | 18 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 5.25e-18 | 117 |
| splanchnic layer of lateral plate mesoderm | 2.28e-14 | 83 |
| vessel | 1.50e-12 | 68 |
| epithelial tube open at both ends | 1.96e-12 | 59 |
| blood vessel | 1.96e-12 | 59 |
| blood vasculature | 1.96e-12 | 59 |
| vascular cord | 1.96e-12 | 59 |
| artery | 1.40e-11 | 42 |
| arterial blood vessel | 1.40e-11 | 42 |
| arterial system | 1.40e-11 | 42 |
Showing 1 to 10 of 36 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 4.01e-17 | 106 |
| cell type cancer | 1.69e-15 | 143 |
| adenocarcinoma | 1.28e-07 | 25 |
Showing 1 to 3 of 3 entries
