FFCP PHASE2:Hg19::chr9:130636920..130636950,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:203 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:361 |TSSclassifier=strong |U...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=361 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q53EY8 | ||
|association_with_transcript=0bp_to_AK223501_5end | |association_with_transcript=0bp_to_AK223501_5end | ||
|cluster_id=chr9:130636920..130636950,- | |cluster_id=chr9:130636920..130636950,- | ||
Latest revision as of 06:02, 25 September 2015
| Short description: | p5@AK1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_AK1_5end |
| Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
| Association with transcript: | 0bp_to_AK223501_5end |
| EntrezGene: | AK1 |
| HGNC: | 361 |
| UniProt: | Q53EY8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@AK1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| GAG secreting cell | 4.93e-19 | 9 |
| carbohydrate secreting cell | 4.93e-19 | 9 |
| chondroblast | 3.83e-15 | 6 |
| chondrocyte | 3.83e-15 | 6 |
| extracellular matrix secreting cell | 5.93e-11 | 15 |
| fibrocyte | 6.19e-11 | 3 |
| tendon cell | 6.19e-11 | 3 |
| stromal cell | 9.94e-11 | 28 |
| mammary gland epithelial cell | 9.31e-09 | 4 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| dense regular connective tissue | 6.19e-11 | 3 |
| tendon | 6.19e-11 | 3 |
| regular connective tissue | 6.19e-11 | 3 |
| mammary gland | 9.31e-09 | 4 |
| mammary bud | 9.31e-09 | 4 |
| mammary ridge | 9.31e-09 | 4 |
| mammary placode | 9.31e-09 | 4 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type benign neoplasm | 5.73e-10 | 3 |
| leiomyoma | 5.73e-10 | 3 |
| benign neoplasm | 1.39e-07 | 4 |
| heart disease | 2.99e-07 | 2 |
Showing 1 to 4 of 4 entries
