FFCP PHASE1:Mm9::chr11:60624526..60624529,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:60624526..60624529,- to FFCP PHASE1:Mm9::chr11:60624526..60624529,-: NSchange) |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|EntrezGene=20425 | |EntrezGene=20425 | ||
|HGNC= | |HGNC= | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=63bp_to_ENSMUST00000173260_5end | |||
|description=CAGE_peak_4_at_Shmt1_5end | |||
|id=chr11:60624526..60624529,- | |||
|ontology_enrichment_disease= | |||
|phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.646413698057667,0.190023419456374,0,0.221730510655305,0,0,0,2.59966457776147,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,1.72084775396277,13.599426674155,7.55584468292944,5.84798775702902,5.82434953226536,4.21333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0.29688427812965,0,2.13125834818499,2.07553947530453,2.11011696773672,0.940709657085638,0.376999773989026,0.494389935468748,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0.590440591918409,1.8839847340965,1.35736880313981,10.3758419480502,0.500535317148282,0.196558995113203,0.674586337154561,0.405720242777006,0.72353147925725,2.5462585178142,1.15078454980324,1.29708181420028,4.94210543738547,4.31304619582064,3.34926852901653,4.68056509671841,5.80931419278357,6.27890947326693,6.27176577772377,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0.247960367176008,0,0.259229946583586,1.24267862617385,1.12738587736838,0,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.358855426437903,0.335769232728157,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.459483751644906,0,0.231768651889711,0.964546102318525,0.412085900803307,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.593175090620871,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0.500895729946347,0.16787927191189,0.233612640595526,0,0.140788722151667,0,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0.159992422793407,0,0,0,0.646413698057667,0.190023419456374,0,0.221730510655305,0,0,0,2.59966457776147,0.997407872150954,1.02084678131185,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,1.73918693221007,1.72084775396277,13.599426674155,7.55584468292944,5.84798775702902,5.82434953226536,4.21333260395256,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0.29688427812965,0,2.13125834818499,2.07553947530453,2.11011696773672,0.940709657085638,0.376999773989026,0.494389935468748,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0.381210681219194,0,0,0,0,0,0,0.162241263067758,0.203678727700633,0,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0.702213187313235,0.257347907114715,0,0,0,0.180062061461015,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0.350296027101508,0.329119699826961,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0.590440591918409,1.8839847340965,1.35736880313981,10.3758419480502,0.500535317148282,0.196558995113203,0.674586337154561,0.405720242777006,0.72353147925725,2.5462585178142,1.15078454980324,1.29708181420028,4.94210543738547,4.31304619582064,3.34926852901653,4.68056509671841,5.80931419278357,6.27890947326693,6.27176577772377,0,0,0,0.169745085775188,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0,0,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0,0,0.436725127492355,0,0.247960367176008,0,0.259229946583586,1.24267862617385,1.12738587736838,0,0.165458490457098,0.388902376688095,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0.358855426437903,0.335769232728157,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.320125762024346,0.459483751644906,0,0.231768651889711,0.964546102318525,0.412085900803307,0.588795680537589,0,0.354951612318675,0.476872379894642,0.145346416632329,0.376437521661322,0.25384382367503,0,0.526139422875686,0.271608227691724,0,0.593175090620871,0.492522411877817,0.818462086339379,0.309873682371932,0.385813221962283,0,0.233931608445408,0.429742108096597,0.382576664137687,0.220591419119515,0 | ||
|short_description=p4@Shmt1 | |||
}} | }} | ||
Revision as of 17:11, 17 April 2012
| Short description: | p4@Shmt1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Shmt1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 63bp_to_ENSMUST00000173260_5end |
| EntrezGene: | Shmt1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
