Personal tools

DOID:5409

From FANTOM5_SSTAR

Revision as of 14:01, 11 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:lung small cell carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D055752
NCI:C4917
OMIM:182280
SNOMEDCT_2010_1_31:254632001
SNOMEDCT_2010_1_31:254633006

UMLS_CUI:C0149925
Synonyms: "Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006]
"SCLC" EXACT [CSP2005:2017-6589]
"small cell carcinoma of lung" RELATED []
"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001]
"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:3905(lung carcinoma)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
1.55e-98FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31p@chr6:125378873..125378876, +
2.4e-66FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
2.4e-66FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93p@chr8:40525350..40525354, -
3.1e-50FFCP PHASE2:Hg19::chr10:82723188..82723191,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:82723188..82723191, -
3.1e-50FFCP PHASE1:Hg19::chr8:85893922..85893940,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:85893922..85893940, +
3.1e-50FFCP PHASE1:Hg19::chr2:51255348..51255351,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:51255348..51255351, +
3.1e-50FFCP PHASE1:Hg19::chr10:129704201..129704232,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704201..129704232, -
3.1e-50FFCP PHASE2:Hg19::chr1:219599419..219599426,-#_5be4114e7d0131f457d60e83d77a108dp@chr1:219599419..219599426, -
3.1e-50FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76688920..76688924, +
3.1e-50FFCP PHASE1:Hg19::chr2:222160741..222160750,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:222160741..222160750, +
3.1e-50FFCP PHASE2:Hg19::chr7:120383546..120383560,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:120383546..120383560, +
3.1e-50FFCP PHASE1:Hg19::chr16:13010455..13010466,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010455..13010466, +
3.1e-50FFCP PHASE2:Hg19::chr3:95401928..95401936,-#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000494840, p3@uc003dro.1
3.1e-50FFCP PHASE1:Hg19::chr14:89802926..89802934,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:89802926..89802934, -
3.1e-50FFCP PHASE2:Hg19::chr2:135170047..135170048,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:135170047..135170048, +
3.1e-50FFCP PHASE2:Hg19::chr14:60958049..60958051,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:60958049..60958051, -
3.1e-50FFCP PHASE1:Hg19::chr6:129513919..129513922,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:129513919..129513922, +
3.1e-50FFCP PHASE1:Hg19::chr18:10085817..10085825,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085817..10085825, +
3.1e-50FFCP PHASE2:Hg19::chr2:97626375..97626385,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626375..97626385, -
3.1e-50FFCP PHASE2:Hg19::chr18:10085504..10085505,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:10085504..10085505, +
3.1e-50FFCP PHASE2:Hg19::chr10:29213612..29213644,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:29213612..29213644, +
3.1e-50FFCP PHASE1:Hg19::chr7:21209872..21209910,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:21209872..21209910, +
3.1e-50FFCP PHASE1:Hg19::chr2:241625540..241625541,+#_5be4114e7d0131f457d60e83d77a108dp14@ENST00000407635
3.1e-50FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:58979826..58979836, +
3.1e-50FFCP PHASE2:Hg19::chr1:168756151..168756165,+#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000420691
3.1e-50FFCP PHASE2:Hg19::chr12:46124855..46124858,+#_5be4114e7d0131f457d60e83d77a108dp@chr12:46124855..46124858, +
3.1e-50FFCP PHASE1:Hg19::chr9:17454025..17454033,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17454025..17454033, +
3.1e-50FFCP PHASE2:Hg19::chr8:72938203..72938230,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:72938203..72938230, +
3.1e-50FFCP PHASE2:Hg19::chr6:64762702..64762707,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:64762702..64762707, +
3.1e-50FFCP PHASE1:Hg19::chr7:39018314..39018323,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:39018314..39018323, +
3.1e-50FFCP PHASE1:Hg19::chr10:121863383..121863387,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:121863383..121863387, -
3.1e-50FFCP PHASE1:Hg19::chr16:7411388..7411391,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:7411388..7411391, +
3.1e-50FFCP PHASE1:Hg19::chr13:76755731..76755739,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:76755731..76755739, +
3.1e-50FFCP PHASE2:Hg19::chr16:7354636..7354645,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:7354636..7354645, -
3.1e-50FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:73794113..73794122, +
3.1e-50FFCP PHASE2:Hg19::chr8:97961449..97961460,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97961449..97961460, -
3.1e-50FFCP PHASE2:Hg19::chr6:23637711..23637717,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:23637711..23637717, -
3.1e-50FFCP PHASE2:Hg19::chr3:86703154..86703166,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:86703154..86703166, -
3.1e-50FFCP PHASE2:Hg19::chr2:220594710..220594720,+#_5be4114e7d0131f457d60e83d77a108dp3@ENST00000442416
3.1e-50FFCP PHASE2:Hg19::chr1:100110807..100110818,+#_5be4114e7d0131f457d60e83d77a108dp@chr1:100110807..100110818, +
3.1e-50FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_5be4114e7d0131f457d60e83d77a108dp20@RTN1
3.1e-50FFCP PHASE1:Hg19::chr8:98073725..98073731,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98073725..98073731, -
3.1e-50FFCP PHASE2:Hg19::chr8:98066259..98066270,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98066259..98066270, -
3.1e-50FFCP PHASE1:Hg19::chr10:29213480..29213487,-#_5be4114e7d0131f457d60e83d77a108dp@chr10:29213480..29213487, -
3.1e-50FFCP PHASE2:Hg19::chr2:91776712..91776739,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:91776712..91776739, +
3.1e-50FFCP PHASE2:Hg19::chr17:79974020..79974025,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:79974020..79974025, +
3.1e-50FFCP PHASE2:Hg19::chr17:39140393..39140399,-#_5be4114e7d0131f457d60e83d77a108dp3@KRT40
3.1e-50FFCP PHASE2:Hg19::chr12:84126726..84126727,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:84126726..84126727, -
3.1e-50FFCP PHASE1:Hg19::chr2:97626588..97626595,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626588..97626595, -
3.1e-50FFCP PHASE1:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108dp@chr16:50553120..50553126, -
3.1e-50FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:154858754..154858762, +
3.1e-50FFCP PHASE1:Hg19::chr18:37420947..37420953,+#_5be4114e7d0131f457d60e83d77a108dp@chr18:37420947..37420953, +
3.1e-50FFCP PHASE2:Hg19::chr14:57127818..57127825,+#_5be4114e7d0131f457d60e83d77a108dp@chr14:57127818..57127825, +
3.1e-50FFCP PHASE2:Hg19::chr17:70940275..70940283,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:70940275..70940283, +
3.1e-50FFCP PHASE1:Hg19::chr14:60194318..60194325,-#_5be4114e7d0131f457d60e83d77a108dp22@RTN1
3.1e-50FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_5be4114e7d0131f457d60e83d77a108dp9@SLC35F4
3.1e-50FFCP PHASE1:Hg19::chr8:98014001..98014041,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:98014001..98014041, -
3.1e-50FFCP PHASE2:Hg19::chr8:97965705..97965721,-#_5be4114e7d0131f457d60e83d77a108dp@chr8:97965705..97965721, -
3.1e-50FFCP PHASE1:Hg19::chr5:134920622..134920655,+#_5be4114e7d0131f457d60e83d77a108dp@chr5:134920622..134920655, +
3.1e-50FFCP PHASE1:Hg19::chrX:135761931..135761934,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761931..135761934, -
3.1e-50FFCP PHASE2:Hg19::chrX:135761770..135761786,-#_5be4114e7d0131f457d60e83d77a108dp@chrX:135761770..135761786, -
3.1e-50FFCP PHASE2:Hg19::chr16:13010571..13010578,+#_5be4114e7d0131f457d60e83d77a108dp@chr16:13010571..13010578, +
3.1e-50FFCP PHASE1:Hg19::chr6:45398505..45398508,+#_5be4114e7d0131f457d60e83d77a108dp@chr6:45398505..45398508, +
3.1e-50FFCP PHASE2:Hg19::chr6:44681761..44681769,-#_5be4114e7d0131f457d60e83d77a108dp@chr6:44681761..44681769, -
3.1e-50FFCP PHASE1:Hg19::chr10:65821760..65821780,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:65821760..65821780, +
3.1e-50FFCP PHASE1:Hg19::chr18:33311016..33311032,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:33311016..33311032, -
3.1e-50FFCP PHASE2:Hg19::chr13:104517168..104517170,+#_5be4114e7d0131f457d60e83d77a108dp@chr13:104517168..104517170, +
3.1e-50FFCP PHASE1:Hg19::chr7:26590581..26590596,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:26590581..26590596, -
3.1e-50FFCP PHASE1:Hg19::chr20:13085064..13085070,+#_5be4114e7d0131f457d60e83d77a108dp@chr20:13085064..13085070, +
3.1e-50FFCP PHASE2:Hg19::chr9:17457123..17457129,+#_5be4114e7d0131f457d60e83d77a108dp@chr9:17457123..17457129, +
3.1e-50FFCP PHASE1:Hg19::chr2:194837773..194837784,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:194837773..194837784, -
3.1e-50FFCP PHASE2:Hg19::chr8:73794113..73794122,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:73794113..73794122, +
3.1e-50FFCP PHASE1:Hg19::chr2:103235120..103235130,+#_5be4114e7d0131f457d60e83d77a108dp@chr2:103235120..103235130, +
3.1e-50FFCP PHASE2:Hg19::chr4:157516018..157516023,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:157516018..157516023, +
3.1e-50FFCP PHASE1:Hg19::chr15:89655929..89655934,+#_5be4114e7d0131f457d60e83d77a108dp@chr15:89655929..89655934, +
3.1e-50FFCP PHASE2:Hg19::chr14:58045800..58045814,-#_5be4114e7d0131f457d60e83d77a108dp@chr14:58045800..58045814, -
3.1e-50FFCP PHASE1:Hg19::chr10:129704562..129704569,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129704562..129704569, +
3.1e-50FFCP PHASE2:Hg19::chr3:150914192..150914197,+#_5be4114e7d0131f457d60e83d77a108dp@chr3:150914192..150914197, +
3.1e-50FFCP PHASE1:Hg19::chr12:79756349..79756364,-#_5be4114e7d0131f457d60e83d77a108dp@chr12:79756349..79756364, -
3.1e-50FFCP PHASE2:Hg19::chr13:92569013..92569022,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92569013..92569022, -
3.1e-50FFCP PHASE2:Hg19::chr10:129703377..129703388,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703377..129703388, +
3.1e-50FFCP PHASE1:Hg19::chr7:79840276..79840283,+#_5be4114e7d0131f457d60e83d77a108dp@chr7:79840276..79840283, +
3.1e-50FFCP PHASE1:Hg19::chr4:3344577..3344588,+#_5be4114e7d0131f457d60e83d77a108dp@chr4:3344577..3344588, +
3.1e-50FFCP PHASE2:Hg19::chrX:10852011..10852021,-#_5be4114e7d0131f457d60e83d77a108dp27@MID1
3.1e-50FFCP PHASE2:Hg19::chr15:97554594..97554599,-#_5be4114e7d0131f457d60e83d77a108dp@chr15:97554594..97554599, -
3.1e-50FFCP PHASE2:Hg19::chr2:97626580..97626585,-#_5be4114e7d0131f457d60e83d77a108dp@chr2:97626580..97626585, -
3.1e-50FFCP PHASE2:Hg19::chr21:43917055..43917058,-#_5be4114e7d0131f457d60e83d77a108dp@chr21:43917055..43917058, -
3.1e-50FFCP PHASE1:Hg19::chr7:95776211..95776254,-#_5be4114e7d0131f457d60e83d77a108dp@chr7:95776211..95776254, -
3.1e-50FFCP PHASE1:Hg19::chr5:28571974..28571978,-#_5be4114e7d0131f457d60e83d77a108dp@chr5:28571974..28571978, -
3.1e-50FFCP PHASE1:Hg19::chr3:102635473..102635480,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:102635473..102635480, -
3.1e-50FFCP PHASE1:Hg19::chr17:63528638..63528642,+#_5be4114e7d0131f457d60e83d77a108dp@chr17:63528638..63528642, +
3.1e-50FFCP PHASE2:Hg19::chr3:102635374..102635381,-#_5be4114e7d0131f457d60e83d77a108dp@chr3:102635374..102635381, -
3.1e-50FFCP PHASE1:Hg19::chr13:25269076..25269105,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:25269076..25269105, -
3.1e-50FFCP PHASE2:Hg19::chr17:59657604..59657621,-#_5be4114e7d0131f457d60e83d77a108dp@chr17:59657604..59657621, -
3.1e-50FFCP PHASE2:Hg19::chr18:39258990..39258996,-#_5be4114e7d0131f457d60e83d77a108dp@chr18:39258990..39258996, -
3.1e-50FFCP PHASE1:Hg19::chr8:116215335..116215378,+#_5be4114e7d0131f457d60e83d77a108dp@chr8:116215335..116215378, +
3.1e-50FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_5be4114e7d0131f457d60e83d77a108dp@chr10:129703363..129703373, +
3.1e-50FFCP PHASE1:Hg19::chr13:92571252..92571265,-#_5be4114e7d0131f457d60e83d77a108dp@chr13:92571252..92571265, -
3.1e-50FFCP PHASE1:Hg19::chr3:95401565..95401581,-#_5be4114e7d0131f457d60e83d77a108dp2@ENST00000463799