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MCL coexpression mm9:68

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:121063710..121063717,+p@chr10:121063710..121063717
+
Mm9::chr10:126582512..126582515,-p@chr10:126582512..126582515
-
Mm9::chr10:126602469..126602480,+p8@B4galnt1
Mm9::chr10:126603541..126603559,+p@chr10:126603541..126603559
+
Mm9::chr10:129768028..129768035,+p@chr10:129768028..129768035
+
Mm9::chr10:129768038..129768087,+p@chr10:129768038..129768087
+
Mm9::chr10:59842970..59842980,-p3@Cdh23
Mm9::chr10:60211980..60211986,+p@chr10:60211980..60211986
+
Mm9::chr10:6373295..6373325,-p2@Mthfd1l
Mm9::chr10:6373362..6373374,-p4@Mthfd1l
Mm9::chr10:76496049..76496060,+p4@Slc19a1
Mm9::chr10:76993304..76993316,+p@chr10:76993304..76993316
+
Mm9::chr10:88289454..88289463,-p2@Utp20
Mm9::chr11:102170573..102170589,+p@chr11:102170573..102170589
+
Mm9::chr11:102170603..102170623,+p@chr11:102170603..102170623
+
Mm9::chr11:20232573..20232606,-p3@Slc1a4
Mm9::chr11:69392626..69392642,-p7@Wrap53
Mm9::chr11:69794730..69794742,-p9@Rai12
Mm9::chr11:78787282..78787293,+p@chr11:78787282..78787293
+
Mm9::chr11:82877885..82877911,+p@chr11:82877885..82877911
+
Mm9::chr11:82878630..82878653,+p2@Slfn2
Mm9::chr11:88366060..88366068,-p@chr11:88366060..88366068
-
Mm9::chr11:97491155..97491200,+p@chr11:97491155..97491200
+
Mm9::chr12:102136674..102136710,+p@chr12:102136674..102136710
+
Mm9::chr12:109874446..109874465,+p@chr12:109874446..109874465
+
Mm9::chr12:112916305..112916351,+p1@Trmt61a
Mm9::chr12:3834789..3834813,+p@chr12:3834789..3834813
+
Mm9::chr12:3834817..3834843,+p@chr12:3834817..3834843
+
Mm9::chr12:3834850..3834864,+p@chr12:3834850..3834864
+
Mm9::chr12:3834893..3834900,+p@chr12:3834893..3834900
+
Mm9::chr12:56592475..56592485,-p@chr12:56592475..56592485
-
Mm9::chr12:85292503..85292518,-p@chr12:85292503..85292518
-
Mm9::chr13:105077113..105077142,+p@chr13:105077113..105077142
+
Mm9::chr13:105077169..105077187,+p@chr13:105077169..105077187
+
Mm9::chr13:105077437..105077459,+p3@Adamts6
Mm9::chr13:105077532..105077546,+p2@Adamts6
Mm9::chr13:105077571..105077578,+p7@Adamts6
Mm9::chr13:105077588..105077604,+p6@Adamts6
Mm9::chr13:105410279..105410284,+p@chr13:105410279..105410284
+
Mm9::chr13:30879542..30879551,-p@chr13:30879542..30879551
-
Mm9::chr13:30879995..30880017,+p@chr13:30879995..30880017
+
Mm9::chr13:30912501..30912512,-p@chr13:30912501..30912512
-
Mm9::chr13:30912528..30912538,-p@chr13:30912528..30912538
-
Mm9::chr13:30912603..30912608,-p@chr13:30912603..30912608
-
Mm9::chr13:30912611..30912629,-p@chr13:30912611..30912629
-
Mm9::chr13:68720964..68721024,-p1@Mtrr
Mm9::chr14:22667666..22667678,+p2@ENSMUST00000169054
Mm9::chr14:54496363..54496388,+p@chr14:54496363..54496388
+
Mm9::chr14:54791475..54791486,+p@chr14:54791475..54791486
+
Mm9::chr14:54799199..54799205,+p@chr14:54799199..54799205
+
Mm9::chr14:54801096..54801113,+p@chr14:54801096..54801113
+
Mm9::chr14:54801159..54801186,+p1@ENSMUST00000103705
Mm9::chr14:54801191..54801223,+p1@uc007tup.1
p2@ENSMUST00000103705
Mm9::chr14:54815712..54815739,+p1@ENSMUST00000103718
Mm9::chr14:54815743..54815751,+p2@ENSMUST00000103718
Mm9::chr14:54842413..54842429,+p@chr14:54842413..54842429
+
Mm9::chr15:36368829..36368842,+p@chr15:36368829..36368842
+
Mm9::chr15:61820512..61820516,+p@chr15:61820512..61820516
+
Mm9::chr15:66630294..66630304,+p3@Tg
Mm9::chr15:66635622..66635631,-p16@Sla
Mm9::chr15:79842670..79842696,+p@chr15:79842670..79842696
+
Mm9::chr15:80403112..80403122,+p12@Grap2
Mm9::chr15:97674105..97674129,+p@chr15:97674105..97674129
+
Mm9::chr15:98860808..98860828,+p3@Tuba1c
Mm9::chr16:46010375..46010397,-p2@Plcxd2
Mm9::chr16:52032670..52032685,+p@chr16:52032670..52032685
+
Mm9::chr16:78577044..78577051,-p8@D16Ertd472e
Mm9::chr16:92058321..92058331,+p6@Mrps6
Mm9::chr16:92825850..92825886,-p@chr16:92825850..92825886
-
Mm9::chr16:93777453..93777464,+p@chr16:93777453..93777464
+
Mm9::chr16:93777486..93777510,+p@chr16:93777486..93777510
+
Mm9::chr17:21704020..21704031,+p3@Zfp948
Mm9::chr17:27022101..27022129,+p@chr17:27022101..27022129
+
Mm9::chr17:27023180..27023193,-p4@ENSMUST00000108741
Mm9::chr17:35341591..35341599,-p@chr17:35341591..35341599
-
Mm9::chr17:35341610..35341630,-p@chr17:35341610..35341630
-
Mm9::chr17:35342110..35342168,-p1@Lta
Mm9::chr17:35342250..35342262,-p3@Lta
Mm9::chr17:35357229..35357236,+p@chr17:35357229..35357236
+
Mm9::chr17:35357241..35357262,+p@chr17:35357241..35357262
+
Mm9::chr17:36135313..36135317,+p@chr17:36135313..36135317
+
Mm9::chr17:45732791..45732816,-p14@Slc29a1
Mm9::chr17:57333593..57333613,-p1@Tnfsf14
Mm9::chr17:80461916..80461925,-p11@Hnrpll
Mm9::chr17:80573148..80573155,-p@chr17:80573148..80573155
-
Mm9::chr17:84818808..84818822,-p@chr17:84818808..84818822
-
Mm9::chr18:61008516..61008554,-p2@Tcof1
Mm9::chr19:10815425..10815439,+p1@A430093F15Rik
Mm9::chr19:29441937..29441958,+p1@Cd274
Mm9::chr19:29528972..29528994,+p@chr19:29528972..29528994
+
Mm9::chr19:5638237..5638263,+p@chr19:5638237..5638263
+
Mm9::chr1:140038899..140038910,-p@chr1:140038899..140038910
-
Mm9::chr1:140072203..140072221,-p4@Ptprc
Mm9::chr1:140072230..140072237,-p8@Ptprc
Mm9::chr1:140072248..140072265,-p3@Ptprc
Mm9::chr1:162142822..162142845,-p2@Cacybp
Mm9::chr1:166865653..166865658,-p1@Xcl1
Mm9::chr1:194956395..194956451,-p1@Diexf
Mm9::chr1:194999930..194999951,+p4@A130010J15Rik
Mm9::chr1:36818600..36818618,+p3@Zap70
Mm9::chr1:36818619..36818622,+p4@Zap70
Mm9::chr1:36818638..36818688,+p1@Zap70
Mm9::chr1:58782939..58782950,+p@chr1:58782939..58782950
+
Mm9::chr1:95949134..95949150,-p1@Pdcd1
Mm9::chr1:95949154..95949164,-p2@Pdcd1
Mm9::chr2:127159776..127159791,-p@chr2:127159776..127159791
-
Mm9::chr2:152655954..152655992,-p5@Bcl2l1
Mm9::chr2:152656002..152656015,-p9@Bcl2l1
Mm9::chr2:153104393..153104431,+p@chr2:153104393..153104431
+
Mm9::chr2:26768051..26768053,+p1@ENSMUST00000083361
Mm9::chr3:106289251..106289254,-p4@2010016I18Rik
Mm9::chr3:106593047..106593058,-p4@Cd53
Mm9::chr3:106593061..106593072,-p6@Cd53
Mm9::chr3:106593093..106593104,-p7@Cd53
Mm9::chr3:106840961..106840980,-p@chr3:106840961..106840980
-
Mm9::chr3:134961897..134961904,+p@chr3:134961897..134961904
+
Mm9::chr3:135276641..135276645,-p@chr3:135276641..135276645
-
Mm9::chr3:37543741..37543745,+p@chr3:37543741..37543745
+
Mm9::chr3:37553336..37553353,+p@chr3:37553336..37553353
+
Mm9::chr3:37553399..37553427,+p@chr3:37553399..37553427
+
Mm9::chr3:37553687..37553700,+p@chr3:37553687..37553700
+
Mm9::chr3:37554940..37554949,+p@chr3:37554940..37554949
+
Mm9::chr3:68565968..68566003,+p@chr3:68565968..68566003
+
Mm9::chr3:68584346..68584356,-p@chr3:68584346..68584356
-
Mm9::chr4:119635138..119635148,-p@chr4:119635138..119635148
-
Mm9::chr4:119705140..119705152,+p@chr4:119705140..119705152
+
Mm9::chr4:133466578..133466589,-p@chr4:133466578..133466589
-
Mm9::chr4:133801432..133801448,-p3@Zfp593
Mm9::chr4:150302128..150302144,+p1@Tnfrsf9
Mm9::chr4:32463234..32463258,+p@chr4:32463234..32463258
+
Mm9::chr4:32511711..32511722,+p@chr4:32511711..32511722
+
Mm9::chr4:32511728..32511749,+p@chr4:32511728..32511749
+
Mm9::chr4:32513661..32513674,+p@chr4:32513661..32513674
+
Mm9::chr4:32744082..32744141,+p1@Mdn1
Mm9::chr4:63521957..63521980,-p@chr4:63521957..63521980
-
Mm9::chr4:63522134..63522156,-p2@Tnfsf8
Mm9::chr5:108154953..108154960,+p4@ENSMUST00000162148
p4@uc008ymz.1
Mm9::chr5:108155161..108155187,+p1@ENSMUST00000162148
p1@uc008ymz.1
Mm9::chr5:53981578..53981590,+p4@Rbpj
Mm9::chr5:8798644..8798654,+p@chr5:8798644..8798654
+
Mm9::chr5:8798677..8798684,+p@chr5:8798677..8798684
+
Mm9::chr6:115531116..115531127,+p@chr6:115531116..115531127
+
Mm9::chr6:124679998..124680009,-p@chr6:124679998..124680009
-
Mm9::chr6:125187767..125187788,+p@chr6:125187767..125187788
+
Mm9::chr6:125215576..125215603,+p1@4930417O13Rik
Mm9::chr6:125215605..125215616,+p3@4930417O13Rik
Mm9::chr6:125216258..125216270,+p@chr6:125216258..125216270
+
Mm9::chr6:125216281..125216301,+p@chr6:125216281..125216301
+
Mm9::chr6:129132696..129132707,+p@chr6:129132696..129132707
+
Mm9::chr6:129132720..129132743,+p@chr6:129132720..129132743
+
Mm9::chr6:129188439..129188447,+p@chr6:129188439..129188447
+
Mm9::chr6:129234428..129234445,-p@chr6:129234428..129234445
-
Mm9::chr6:145023859..145023862,+p@chr6:145023859..145023862
+
Mm9::chr6:145023918..145023936,+p@chr6:145023918..145023936
+
Mm9::chr6:48689005..48689018,+p2@Gimap1
Mm9::chr6:81915659..81915673,-p2@Mrpl19
Mm9::chr6:85382005..85382039,+p2@Smyd5
Mm9::chr7:133709863..133709868,-p2@Eif3c
Mm9::chr7:134006086..134006100,+p11@Hirip3
Mm9::chr7:134006101..134006125,+p9@Hirip3
Mm9::chr7:134288065..134288079,-p@chr7:134288065..134288079
-
Mm9::chr7:147129867..147129874,+p5@Utf1
Mm9::chr7:150943007..150943022,+p@chr7:150943007..150943022
+
Mm9::chr7:52703236..52703248,+p4@Gys1
Mm9::chr7:52703256..52703264,+p7@Gys1
Mm9::chr7:52703266..52703277,+p5@Gys1
Mm9::chr7:52963182..52963199,+p9@Dbp
Mm9::chr7:97279725..97279753,-p@chr7:97279725..97279753
-
Mm9::chr8:119468224..119468230,-p@chr8:119468224..119468230
-
Mm9::chr8:119468273..119468284,-p@chr8:119468273..119468284
-
Mm9::chr8:81552528..81552553,+p6@Zfp827
Mm9::chr8:84293968..84293987,+p@chr8:84293968..84293987
+
Mm9::chr8:84294470..84294475,+p19@Inpp4b
Mm9::chr8:84347023..84347072,-p@chr8:84347023..84347072
-
Mm9::chr8:86097350..86097364,-p5@Tecr
Mm9::chr8:86097400..86097411,-p7@Tecr
Mm9::chr9:103267112..103267175,-p9@Cdv3
Mm9::chr9:120001224..120001239,+p1@Ccr8
Mm9::chr9:122908294..122908299,+p@chr9:122908294..122908299
+
Mm9::chr9:122908312..122908339,+p@chr9:122908312..122908339
+
Mm9::chr9:122908568..122908574,+p@chr9:122908568..122908574
+
Mm9::chr9:122908583..122908605,+p@chr9:122908583..122908605
+
Mm9::chr9:122930533..122930581,-p@chr9:122930533..122930581
-
Mm9::chr9:40242614..40242646,-p@chr9:40242614..40242646
-
Mm9::chr9:40242741..40242756,-p@chr9:40242741..40242756
-
Mm9::chr9:40257950..40257996,+p@chr9:40257950..40257996
+
Mm9::chr9:40262927..40262969,-p@chr9:40262927..40262969
-
Mm9::chr9:40263003..40263020,-p@chr9:40263003..40263020
-
Mm9::chr9:40263028..40263041,-p@chr9:40263028..40263041
-
Mm9::chr9:40263091..40263105,-p@chr9:40263091..40263105
-
Mm9::chr9:63559790..63559801,-p14@Smad3
Mm9::chr9:77161528..77161532,+p@chr9:77161528..77161532
+
Mm9::chr9:89094135..89094148,+p1@Bcl2a1b
Mm9::chr9:89094157..89094170,+p2@Bcl2a1b
p2@Mthfs
Mm9::chrX:104451043..104451053,+p4@Gpr174
Mm9::chrX:104451111..104451121,+p7@Gpr174
Mm9::chrX:104451495..104451506,+p3@Gpr174
Mm9::chrX:104451511..104451512,+p12@Gpr174
Mm9::chrX:54453687..54453696,+p4@Gm14718
Mm9::chrX:54453709..54453723,+p2@Gm14718
Mm9::chrX:54453734..54453748,+p3@Gm14718
Mm9::chrX:54453790..54453810,+p1@Gm14718
Mm9::chrX:79068215..79068229,-p1@ENSMUST00000118948
p1@ENSMUST00000168371


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data




Relative expression of the co-expression cluster over median <br>Analyst:





Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>



TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data


Novel motifs




JASPAR motifs