CL:0002427
From FANTOM5_SSTAR
| Name: | resting double-positive thymocyte |
|---|---|
| Namespace: | cell;;efo |
| Definition: | "A double-positive, alpha-beta thymocyte that is small and not proliferating." [GOC:tfm, http://www.immgen.org/index_content.html] |
| Synonyms: | "T.DP.sm.Th" EXACT [] |
| Created by: | tmeehan |
| Creation date: | 2010-10-21T01:59:06Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000809(double-positive, alpha-beta thymocyte) |
|---|
Children
| develops from: | CL:0002428 (double-positive blast) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002427 (resting double-positive thymocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.55e-98 | FFCP PHASE1:Hg19::chr1:183622379..183622388,-#_3761bc648abcd5418d8e0c97d64b8e56 | p4@APOBEC4 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr1:183622379..183622388,-#_3761bc648abcd5418d8e0c97d64b8e56 | p4@APOBEC4 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:162762361..162762364,+#_3761bc648abcd5418d8e0c97d64b8e56 | p@chr2:162762361..162762364, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:162762361..162762364,+#_3761bc648abcd5418d8e0c97d64b8e56 | p@chr2:162762361..162762364, + |
| 1.36e-86 | FFCP PHASE2:Mm9::chr13:30878406..30878419,+#_1ccc7b94e50b6839bd33fba1b52803b6 | p@chr13:30878406..30878419, + |
| 1.36e-86 | FFCP PHASE2:Mm9::chrX:54476786..54476810,+#_1ccc7b94e50b6839bd33fba1b52803b6 | p@chrX:54476786..54476810, + |
| 1.36e-86 | FFCP PHASE1:Mm9::chr13:30878406..30878419,+#_1ccc7b94e50b6839bd33fba1b52803b6 | p@chr13:30878406..30878419, + |
| 1.36e-86 | FFCP PHASE1:Mm9::chrX:54476786..54476810,+#_1ccc7b94e50b6839bd33fba1b52803b6 | p@chrX:54476786..54476810, + |
| 1.01e-74 | FFCP PHASE1:Mm9::chr16:52032670..52032685,+#_c09c4ee3af2bbb15040b9322154b10ab | p@chr16:52032670..52032685, + |
| 1.01e-74 | FFCP PHASE2:Mm9::chr16:52032670..52032685,+#_c09c4ee3af2bbb15040b9322154b10ab | p@chr16:52032670..52032685, + |
| 2.41e-74 | FFCP PHASE2:Mm9::chr16:93777453..93777464,+#_e580b80be99d1f6353059948361c3d3c | p@chr16:93777453..93777464, + |
| 2.41e-74 | FFCP PHASE2:Mm9::chr14:54795946..54795960,+#_e580b80be99d1f6353059948361c3d3c | p1@ENSMUST00000103701 |
| 2.41e-74 | FFCP PHASE1:Mm9::chr14:54795946..54795960,+#_e580b80be99d1f6353059948361c3d3c | p1@ENSMUST00000103701 |
| 2.41e-74 | FFCP PHASE1:Mm9::chr16:93777453..93777464,+#_e580b80be99d1f6353059948361c3d3c | p@chr16:93777453..93777464, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr11:11592840..11592849,+#_5f436835a36556b7510f959699d1dbc5 | p@chr11:11592840..11592849, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr11:11587720..11587735,+#_5f436835a36556b7510f959699d1dbc5 | p@chr11:11587720..11587735, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr15:80403112..80403122,+#_5f436835a36556b7510f959699d1dbc5 | p12@Grap2 |
| 2.48e-72 | FFCP PHASE1:Mm9::chr11:11592840..11592849,+#_5f436835a36556b7510f959699d1dbc5 | p@chr11:11592840..11592849, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr15:80403112..80403122,+#_5f436835a36556b7510f959699d1dbc5 | p12@Grap2 |
| 2.48e-72 | FFCP PHASE1:Mm9::chr14:54827490..54827502,+#_5f436835a36556b7510f959699d1dbc5 | p@chr14:54827490..54827502, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr14:122362270..122362291,-#_5f436835a36556b7510f959699d1dbc5 | p@chr14:122362270..122362291, - |
| 2.48e-72 | FFCP PHASE2:Mm9::chr14:54827490..54827502,+#_5f436835a36556b7510f959699d1dbc5 | p@chr14:54827490..54827502, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr13:30853488..30853499,+#_5f436835a36556b7510f959699d1dbc5 | p@chr13:30853488..30853499, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr11:11587720..11587735,+#_5f436835a36556b7510f959699d1dbc5 | p@chr11:11587720..11587735, + |
| 2.48e-72 | FFCP PHASE2:Mm9::chr13:30853488..30853499,+#_5f436835a36556b7510f959699d1dbc5 | p@chr13:30853488..30853499, + |
| 2.48e-72 | FFCP PHASE1:Mm9::chr14:122362270..122362291,-#_5f436835a36556b7510f959699d1dbc5 | p@chr14:122362270..122362291, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr9:75772924..75772957,+#_34802313f6e13e67b58702eda8dc3630 | p17@ANXA1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:75772924..75772957,+#_34802313f6e13e67b58702eda8dc3630 | p17@ANXA1 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr20:37493438..37493456,-#_0e80765c9c327683f542c67d637184dd | p@chr20:37493438..37493456, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:204816181..204816219,-#_0e80765c9c327683f542c67d637184dd | p@chr2:204816181..204816219, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr2:204816181..204816219,-#_0e80765c9c327683f542c67d637184dd | p@chr2:204816181..204816219, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr11:118209514..118209525,+#_0e80765c9c327683f542c67d637184dd | p@chr11:118209514..118209525, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr20:37493438..37493456,-#_0e80765c9c327683f542c67d637184dd | p@chr20:37493438..37493456, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr11:118209514..118209525,+#_0e80765c9c327683f542c67d637184dd | p@chr11:118209514..118209525, + |
| 1.05e-65 | FFCP PHASE1:Mm9::chr14:53242248..53242261,+#_13040022a8c52922aabc42280b0f6938 | p@chr14:53242248..53242261, + |
| 1.05e-65 | FFCP PHASE2:Mm9::chr14:53242248..53242261,+#_13040022a8c52922aabc42280b0f6938 | p@chr14:53242248..53242261, + |
| 1.74e-65 | FFCP PHASE2:Mm9::chr5:123439274..123439290,+#_d6c2b2b57a4070b6105314e2ce3ee18f | p4@ENSMUST00000148466, p4@uc008zmw.1 |
| 1.74e-65 | FFCP PHASE1:Mm9::chr5:123439274..123439290,+#_d6c2b2b57a4070b6105314e2ce3ee18f | p4@ENSMUST00000148466, p4@uc008zmw.1 |
| 2.25e-65 | FFCP PHASE1:Mm9::chr5:123465978..123465989,-#_d19f75ba0a0e6ffd507199d86618c99a | p@chr5:123465978..123465989, - |
| 2.25e-65 | FFCP PHASE2:Mm9::chr5:123465978..123465989,-#_d19f75ba0a0e6ffd507199d86618c99a | p@chr5:123465978..123465989, - |
| 2.25e-65 | FFCP PHASE2:Mm9::chr15:80403104..80403111,+#_d19f75ba0a0e6ffd507199d86618c99a | p10@Grap2 |
| 2.25e-65 | FFCP PHASE1:Mm9::chr1:140069290..140069308,+#_d19f75ba0a0e6ffd507199d86618c99a | p@chr1:140069290..140069308, + |
| 2.25e-65 | FFCP PHASE2:Mm9::chr1:140069290..140069308,+#_d19f75ba0a0e6ffd507199d86618c99a | p@chr1:140069290..140069308, + |
| 2.25e-65 | FFCP PHASE1:Mm9::chr15:80403104..80403111,+#_d19f75ba0a0e6ffd507199d86618c99a | p10@Grap2 |
| 2.9e-65 | FFCP PHASE2:Mm9::chr11:46200242..46200255,+#_8ad3f104556264d6d539d10abe767b34 | p@chr11:46200242..46200255, + |
| 2.9e-65 | FFCP PHASE1:Mm9::chr11:46200242..46200255,+#_8ad3f104556264d6d539d10abe767b34 | p@chr11:46200242..46200255, + |
| 2.9e-65 | FFCP PHASE1:Mm9::chr6:41504409..41504422,-#_8ad3f104556264d6d539d10abe767b34 | p@chr6:41504409..41504422, - |
| 2.9e-65 | FFCP PHASE2:Mm9::chr14:54817583..54817593,-#_8ad3f104556264d6d539d10abe767b34 | p@chr14:54817583..54817593, - |
| 2.9e-65 | FFCP PHASE1:Mm9::chr14:54817583..54817593,-#_8ad3f104556264d6d539d10abe767b34 | p@chr14:54817583..54817593, - |
| 2.9e-65 | FFCP PHASE2:Mm9::chr6:41504409..41504422,-#_8ad3f104556264d6d539d10abe767b34 | p@chr6:41504409..41504422, - |
| 3.74e-65 | FFCP PHASE2:Mm9::chr4:32328217..32328228,-#_19d7f75d4a8b4c683544e26d87b60bf7 | p@chr4:32328217..32328228, - |
| 3.74e-65 | FFCP PHASE1:Mm9::chr4:32328217..32328228,-#_19d7f75d4a8b4c683544e26d87b60bf7 | p@chr4:32328217..32328228, - |
| 6.21e-65 | FFCP PHASE2:Mm9::chr13:105412781..105412798,+#_9fa4a8a332000435d3756837ca909ada | p@chr13:105412781..105412798, + |
| 6.21e-65 | FFCP PHASE1:Mm9::chr11:46200110..46200124,-#_9fa4a8a332000435d3756837ca909ada | p@chr11:46200110..46200124, - |
| 6.21e-65 | FFCP PHASE1:Mm9::chr13:105412781..105412798,+#_9fa4a8a332000435d3756837ca909ada | p@chr13:105412781..105412798, + |
| 6.21e-65 | FFCP PHASE2:Mm9::chr5:123465955..123465966,-#_9fa4a8a332000435d3756837ca909ada | p@chr5:123465955..123465966, - |
| 6.21e-65 | FFCP PHASE2:Mm9::chr11:46200110..46200124,-#_9fa4a8a332000435d3756837ca909ada | p@chr11:46200110..46200124, - |
| 6.21e-65 | FFCP PHASE1:Mm9::chr5:123465955..123465966,-#_9fa4a8a332000435d3756837ca909ada | p@chr5:123465955..123465966, - |
| 1.0e-60 | FFCP PHASE1:Mm9::chr2:11097490..11097500,+#_26bb687bb8da4e70435bf6d82e395dc5 | p@chr2:11097490..11097500, + |
| 1.0e-60 | FFCP PHASE2:Mm9::chr2:11097490..11097500,+#_26bb687bb8da4e70435bf6d82e395dc5 | p@chr2:11097490..11097500, + |
| 1.33e-60 | FFCP PHASE2:Mm9::chr12:70398221..70398232,-#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr12:70398221..70398232, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr7:150943007..150943022,+#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr7:150943007..150943022, + |
| 1.33e-60 | FFCP PHASE1:Mm9::chr5:108160486..108160515,-#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr5:108160486..108160515, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr10:128157769..128157772,-#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr10:128157769..128157772, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr12:70398221..70398232,-#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr12:70398221..70398232, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr10:128157769..128157772,-#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr10:128157769..128157772, - |
| 1.33e-60 | FFCP PHASE2:Mm9::chr5:108160486..108160515,-#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr5:108160486..108160515, - |
| 1.33e-60 | FFCP PHASE1:Mm9::chr7:150943007..150943022,+#_edfd9ca042b82f997fcdfc5ae2038f4a | p@chr7:150943007..150943022, + |
| 1.77e-60 | FFCP PHASE2:Mm9::chr14:53414758..53414769,+#_08fa190745e51044b150e3ebf0097851 | p1@ENSMUST00000103582 |
| 1.77e-60 | FFCP PHASE1:Mm9::chr14:53414758..53414769,+#_08fa190745e51044b150e3ebf0097851 | p1@ENSMUST00000103582 |
| 2.34e-60 | FFCP PHASE1:Mm9::chr2:73290853..73290866,+#_bc5e7e031b038969635f04227d906923 | p@chr2:73290853..73290866, + |
| 2.34e-60 | FFCP PHASE2:Mm9::chr2:73290853..73290866,+#_bc5e7e031b038969635f04227d906923 | p@chr2:73290853..73290866, + |
| 4.1e-60 | FFCP PHASE1:Mm9::chr2:11181142..11181148,-#_3ea8b2da89d1fb1ebdc16654dc628b05 | p@chr2:11181142..11181148, - |
| 4.1e-60 | FFCP PHASE2:Mm9::chr1:138476217..138476228,+#_3ea8b2da89d1fb1ebdc16654dc628b05 | p@chr1:138476217..138476228, + |
| 4.1e-60 | FFCP PHASE2:Mm9::chr9:14708434..14708444,-#_3ea8b2da89d1fb1ebdc16654dc628b05 | p8@Folr4 |
| 4.1e-60 | FFCP PHASE1:Mm9::chr9:14708434..14708444,-#_3ea8b2da89d1fb1ebdc16654dc628b05 | p8@Folr4 |
| 4.1e-60 | FFCP PHASE1:Mm9::chr1:138476217..138476228,+#_3ea8b2da89d1fb1ebdc16654dc628b05 | p@chr1:138476217..138476228, + |
| 4.1e-60 | FFCP PHASE2:Mm9::chr2:11181142..11181148,-#_3ea8b2da89d1fb1ebdc16654dc628b05 | p@chr2:11181142..11181148, - |
| 6.9e-59 | FFCP PHASE1:Mm9::chrX:54477240..54477286,+#_0592e3aacb6d24fc1aae363b4ce817d8 | p@chrX:54477240..54477286, + |
| 6.9e-59 | FFCP PHASE2:Mm9::chr11:87558695..87558707,+#_0592e3aacb6d24fc1aae363b4ce817d8 | p@chr11:87558695..87558707, + |
| 6.9e-59 | FFCP PHASE2:Mm9::chrX:54465221..54465232,+#_0592e3aacb6d24fc1aae363b4ce817d8 | p4@Cd40lg |
| 6.9e-59 | FFCP PHASE2:Mm9::chrX:54477240..54477286,+#_0592e3aacb6d24fc1aae363b4ce817d8 | p@chrX:54477240..54477286, + |
| 6.9e-59 | FFCP PHASE1:Mm9::chr11:87558695..87558707,+#_0592e3aacb6d24fc1aae363b4ce817d8 | p@chr11:87558695..87558707, + |
| 6.9e-59 | FFCP PHASE1:Mm9::chrX:54465221..54465232,+#_0592e3aacb6d24fc1aae363b4ce817d8 | p4@Cd40lg |
| 1.09e-58 | FFCP PHASE1:Mm9::chr4:32339235..32339263,+#_66f6442192147872d494086ca9b6aa24 | p@chr4:32339235..32339263, + |
| 1.09e-58 | FFCP PHASE2:Mm9::chr4:32339235..32339263,+#_66f6442192147872d494086ca9b6aa24 | p@chr4:32339235..32339263, + |
| 1.71e-58 | FFCP PHASE1:Mm9::chr19:10904395..10904400,-#_382ebe6077612073c983cdd563f6dd1d | p5@Cd6 |
| 1.71e-58 | FFCP PHASE2:Mm9::chr19:10904395..10904400,-#_382ebe6077612073c983cdd563f6dd1d | p5@Cd6 |
| 1.71e-58 | FFCP PHASE2:Mm9::chr16:23175296..23175310,+#_382ebe6077612073c983cdd563f6dd1d | p3@uc007ytl.1 |
| 1.71e-58 | FFCP PHASE1:Mm9::chr16:23175296..23175310,+#_382ebe6077612073c983cdd563f6dd1d | p3@uc007ytl.1 |
| 2.15e-58 | FFCP PHASE2:Mm9::chr14:54831123..54831141,+#_bc8a58c5a843673eae9446f1c3607bc1 | p1@ENSMUST00000103733 |
| 2.15e-58 | FFCP PHASE1:Mm9::chr14:54831123..54831141,+#_bc8a58c5a843673eae9446f1c3607bc1 | p1@ENSMUST00000103733 |
| 2.69e-58 | FFCP PHASE1:Mm9::chr4:32339511..32339518,+#_f762f988622b16b3fafcf488db329e68 | p@chr4:32339511..32339518, + |
| 2.69e-58 | FFCP PHASE2:Mm9::chr4:151490126..151490137,+#_f762f988622b16b3fafcf488db329e68 | p3@Tnfrsf25 |
| 2.69e-58 | FFCP PHASE1:Mm9::chr4:151490126..151490137,+#_f762f988622b16b3fafcf488db329e68 | p3@Tnfrsf25 |
| 2.69e-58 | FFCP PHASE2:Mm9::chr4:32339511..32339518,+#_f762f988622b16b3fafcf488db329e68 | p@chr4:32339511..32339518, + |
| 3.38e-58 | FFCP PHASE2:Mm9::chr6:48656532..48656548,+#_4064685ff6a299ce98c2cde43223b622 | p@chr6:48656532..48656548, + |
| 3.38e-58 | FFCP PHASE1:Mm9::chr6:48656532..48656548,+#_4064685ff6a299ce98c2cde43223b622 | p@chr6:48656532..48656548, + |
| 3.91e-58 | FFCP PHASE2:Mm9::chr19:29325115..29325128,+#_f939b83a22a372b44df37efebe7da7df | p@chr19:29325115..29325128, + |
| 3.91e-58 | FFCP PHASE1:Mm9::chr9:40242741..40242756,-#_f939b83a22a372b44df37efebe7da7df | p@chr9:40242741..40242756, - |
