Personal tools

UBERON:0010351

From FANTOM5_SSTAR

Revision as of 13:45, 27 June 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:otic capsule cartilage condensation
Xrefs:
links:

EHDAA2:0001333
EHDAA:4704

EMAPA:17596

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004121(ectoderm-derived structure),UBERON:0005863(cartilaginous condensation),UBERON:0010314(structure with developmental contribution from neural crest)
develops_from:UBERON:0010349(otic capsule pre-cartilage condensation)
part_of:UBERON:0001846(internal ear)



Children

develops from:UBERON:0004637 (otic capsule)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010351 (otic capsule cartilage condensation), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_7340133e79b8a00bb8f1350e897738a8p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_7340133e79b8a00bb8f1350e897738a8p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_7340133e79b8a00bb8f1350e897738a8p2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_7340133e79b8a00bb8f1350e897738a8p@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_7340133e79b8a00bb8f1350e897738a8p10@Otof
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_7340133e79b8a00bb8f1350e897738a8p21@Espn
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_7340133e79b8a00bb8f1350e897738a8p@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_7340133e79b8a00bb8f1350e897738a8p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_7340133e79b8a00bb8f1350e897738a8p1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_7340133e79b8a00bb8f1350e897738a8p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_7340133e79b8a00bb8f1350e897738a8p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_7340133e79b8a00bb8f1350e897738a8p10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_7340133e79b8a00bb8f1350e897738a8p@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_7340133e79b8a00bb8f1350e897738a8p@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_7340133e79b8a00bb8f1350e897738a8p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_7340133e79b8a00bb8f1350e897738a8p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_7340133e79b8a00bb8f1350e897738a8p@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_7340133e79b8a00bb8f1350e897738a8p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_7340133e79b8a00bb8f1350e897738a8p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_7340133e79b8a00bb8f1350e897738a8p@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_7340133e79b8a00bb8f1350e897738a8p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_7340133e79b8a00bb8f1350e897738a8p@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_7340133e79b8a00bb8f1350e897738a8p@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_7340133e79b8a00bb8f1350e897738a8p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_7340133e79b8a00bb8f1350e897738a8p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_7340133e79b8a00bb8f1350e897738a8p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_7340133e79b8a00bb8f1350e897738a8p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_7340133e79b8a00bb8f1350e897738a8p3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_7340133e79b8a00bb8f1350e897738a8p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_7340133e79b8a00bb8f1350e897738a8p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_7340133e79b8a00bb8f1350e897738a8p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_7340133e79b8a00bb8f1350e897738a8p2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_7340133e79b8a00bb8f1350e897738a8p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_7340133e79b8a00bb8f1350e897738a8p10@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_7340133e79b8a00bb8f1350e897738a8p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_7340133e79b8a00bb8f1350e897738a8p5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_7340133e79b8a00bb8f1350e897738a8p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_7340133e79b8a00bb8f1350e897738a8p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_7340133e79b8a00bb8f1350e897738a8p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_7340133e79b8a00bb8f1350e897738a8p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_7340133e79b8a00bb8f1350e897738a8p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_7340133e79b8a00bb8f1350e897738a8p3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_7340133e79b8a00bb8f1350e897738a8p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_7340133e79b8a00bb8f1350e897738a8p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_7340133e79b8a00bb8f1350e897738a8p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_7340133e79b8a00bb8f1350e897738a8p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_7340133e79b8a00bb8f1350e897738a8p7@Tecta
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_7340133e79b8a00bb8f1350e897738a8p6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_7340133e79b8a00bb8f1350e897738a8p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_7340133e79b8a00bb8f1350e897738a8p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_7340133e79b8a00bb8f1350e897738a8p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_7340133e79b8a00bb8f1350e897738a8p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_7340133e79b8a00bb8f1350e897738a8p@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_7340133e79b8a00bb8f1350e897738a8p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_7340133e79b8a00bb8f1350e897738a8p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_7340133e79b8a00bb8f1350e897738a8p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_7340133e79b8a00bb8f1350e897738a8p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_7340133e79b8a00bb8f1350e897738a8p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_7340133e79b8a00bb8f1350e897738a8p1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_7340133e79b8a00bb8f1350e897738a8p2@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_7340133e79b8a00bb8f1350e897738a8p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_7340133e79b8a00bb8f1350e897738a8p9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_7340133e79b8a00bb8f1350e897738a8p6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_7340133e79b8a00bb8f1350e897738a8p5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_7340133e79b8a00bb8f1350e897738a8p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_7340133e79b8a00bb8f1350e897738a8p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_7340133e79b8a00bb8f1350e897738a8p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_7340133e79b8a00bb8f1350e897738a8p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_7340133e79b8a00bb8f1350e897738a8p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_7340133e79b8a00bb8f1350e897738a8p13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_7340133e79b8a00bb8f1350e897738a8p@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_7340133e79b8a00bb8f1350e897738a8p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_7340133e79b8a00bb8f1350e897738a8p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_7340133e79b8a00bb8f1350e897738a8p2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_7340133e79b8a00bb8f1350e897738a8p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_7340133e79b8a00bb8f1350e897738a8p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_7340133e79b8a00bb8f1350e897738a8p@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_7340133e79b8a00bb8f1350e897738a8p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_7340133e79b8a00bb8f1350e897738a8p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_7340133e79b8a00bb8f1350e897738a8p@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_7340133e79b8a00bb8f1350e897738a8p4@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_7340133e79b8a00bb8f1350e897738a8p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_7340133e79b8a00bb8f1350e897738a8p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_7340133e79b8a00bb8f1350e897738a8p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_7340133e79b8a00bb8f1350e897738a8p5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_7340133e79b8a00bb8f1350e897738a8p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_7340133e79b8a00bb8f1350e897738a8p2@Tectb
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_7340133e79b8a00bb8f1350e897738a8p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_7340133e79b8a00bb8f1350e897738a8p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_7340133e79b8a00bb8f1350e897738a8p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_7340133e79b8a00bb8f1350e897738a8p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_7340133e79b8a00bb8f1350e897738a8p9@Ankrd24
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_7340133e79b8a00bb8f1350e897738a8p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_7340133e79b8a00bb8f1350e897738a8p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_7340133e79b8a00bb8f1350e897738a8p7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_7340133e79b8a00bb8f1350e897738a8p2@Otof
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_7340133e79b8a00bb8f1350e897738a8p@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_7340133e79b8a00bb8f1350e897738a8p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_7340133e79b8a00bb8f1350e897738a8p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_7340133e79b8a00bb8f1350e897738a8p@chr15:12848147..12848162, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0010351&oldid=1838120"